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Sequence, Chains, Asymmetric and Biological Units

Title HUMAN ADENOVIRUS TYPE 11 KNOB IN COMPLEX WITH DOMAINS SCR1 A CD46 (MEMBRANE COFACTOR PROTEIN, MCP)
Keywords MEMBRANE COFACTOR PROTEIN, MCP, CD46, ADENOVIRUS, FIBER KNOB VIRUS RECEPTOR COMPLEX, SCR, SHORT CONSENSUS REPEAT, CCP, C CONTROL PROTEIN, VIRAL PROTEIN-IMMUNE SYSTEM COMPLEX
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   2O39     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   FIBER PROTEIN  A 197 1548 0
2  Protein   FIBER PROTEIN  B 197 1548 0
3  Protein   MEMBRANE COFACTOR PROTEIN  C 126 1019 0
4  Protein   MEMBRANE COFACTOR PROTEIN  D 126 1019 0
5  Ligand    E 3 0 39
6  Ligand    F 3 0 39
7  Ligand   MEMBRANE COFACTOR PROTEIN  C 1 0 1
8  Ligand   MEMBRANE COFACTOR PROTEIN  D 2 0 2
9 Water     34 0 34
total       689 5134 115
Proteins
Unit 1 ASP129 ASN130 ILE131 ASN132 THR133 LEU134 TRP135 THR136 GLY137 VAL138 ASN139 PRO140 THR141 GLU142 ALA143 ASN144 CYS145 GLN146 ILE147 MET148 ASN149 SER150 SER151 GLU152 SER153 ASN154 ASP155 CYS156 LYS157 LEU158 ILE159 LEU160 THR161 LEU162 VAL163 LYS164 THR165 GLY166 ALA167 LEU168 VAL169 THR170 ALA171 PHE172 VAL173 TYR174 VAL175 ILE176 GLY177 VAL178 SER179 ASN180 ASN181 PHE182 ASN183 MET184 LEU185 THR186 THR187 HIS188 ARG189 ASN190 ILE191 ASN192 PHE193 THR194 ALA195 GLU196 LEU197 PHE198 PHE199 ASP200 SER201 THR202 GLY203 ASN204 LEU205 LEU206 THR207 ARG208 LEU209 SER210 SER211 LEU212 LYS213 THR214 PRO215 LEU216 ASN217 HIS218 LYS219 SER220 GLY221 GLN222 ASN223 MET224 ALA225 THR226 GLY227 ALA228 ILE229 THR230 ASN231 ALA232 LYS233 GLY234 PHE235 MET236 PRO237 SER238 THR239 THR240 ALA241 TYR242 PRO243 PHE244 ASN245 ASP246 ASN247 SER248 ARG249 GLU250 LYS251 GLU252 ASN253 TYR254 ILE255 TYR256 GLY257 THR258 CYS259 TYR260 TYR261 THR262 ALA263 SER264 ASP265 ARG266 THR267 ALA268 PHE269 PRO270 ILE271 ASP272 ILE273 SER274 VAL275 MET276 LEU277 ASN278 ARG279 ARG280 ALA281 ILE282 ASN283 ASP284 GLU285 THR286 SER287 TYR288 CYS289 ILE290 ARG291 ILE292 THR293 TRP294 SER295 TRP296 ASN297 THR298 GLY299 ASP300 ALA301 PRO302 GLU303 VAL304 GLN305 THR306 SER307 ALA308 THR309 THR310 LEU311 VAL312 THR313 SER314 PRO315 PHE316 THR317 PHE318 TYR319 TYR320 ILE321 ARG322 GLU323 ASP324 ASP325
Unit 2 ASP129 ASN130 ILE131 ASN132 THR133 LEU134 TRP135 THR136 GLY137 VAL138 ASN139 PRO140 THR141 GLU142 ALA143 ASN144 CYS145 GLN146 ILE147 MET148 ASN149 SER150 SER151 GLU152 SER153 ASN154 ASP155 CYS156 LYS157 LEU158 ILE159 LEU160 THR161 LEU162 VAL163 LYS164 THR165 GLY166 ALA167 LEU168 VAL169 THR170 ALA171 PHE172 VAL173 TYR174 VAL175 ILE176 GLY177 VAL178 SER179 ASN180 ASN181 PHE182 ASN183 MET184 LEU185 THR186 THR187 HIS188 ARG189 ASN190 ILE191 ASN192 PHE193 THR194 ALA195 GLU196 LEU197 PHE198 PHE199 ASP200 SER201 THR202 GLY203 ASN204 LEU205 LEU206 THR207 ARG208 LEU209 SER210 SER211 LEU212 LYS213 THR214 PRO215 LEU216 ASN217 HIS218 LYS219 SER220 GLY221 GLN222 ASN223 MET224 ALA225 THR226 GLY227 ALA228 ILE229 THR230 ASN231 ALA232 LYS233 GLY234 PHE235 MET236 PRO237 SER238 THR239 THR240 ALA241 TYR242 PRO243 PHE244 ASN245 ASP246 ASN247 SER248 ARG249 GLU250 LYS251 GLU252 ASN253 TYR254 ILE255 TYR256 GLY257 THR258 CYS259 TYR260 TYR261 THR262 ALA263 SER264 ASP265 ARG266 THR267 ALA268 PHE269 PRO270 ILE271 ASP272 ILE273 SER274 VAL275 MET276 LEU277 ASN278 ARG279 ARG280 ALA281 ILE282 ASN283 ASP284 GLU285 THR286 SER287 TYR288 CYS289 ILE290 ARG291 ILE292 THR293 TRP294 SER295 TRP296 ASN297 THR298 GLY299 ASP300 ALA301 PRO302 GLU303 VAL304 GLN305 THR306 SER307 ALA308 THR309 THR310 LEU311 VAL312 THR313 SER314 PRO315 PHE316 THR317 PHE318 TYR319 TYR320 ILE321 ARG322 GLU323 ASP324 ASP325
Unit 3 CYS1 GLU2 GLU3 PRO4 PRO5 THR6 PHE7 GLU8 ALA9 MET10 GLU11 LEU12 ILE13 GLY14 LYS15 PRO16 LYS17 PRO18 TYR19 TYR20 GLU21 ILE22 GLY23 GLU24 ARG25 VAL26 ASP27 TYR28 LYS29 CYS30 LYS31 LYS32 GLY33 TYR34 PHE35 TYR36 ILE37 PRO38 PRO39 LEU40 ALA41 THR42 HIS43 THR44 ILE45 CYS46 ASP47 ARG48 ASN49 HIS50 THR51 TRP52 LEU53 PRO54 VAL55 SER56 ASP57 ASP58 ALA59 CYS60 TYR61 ARG62 GLU63 THR64 CYS65 PRO66 TYR67 ILE68 ARG69 ASP70 PRO71 LEU72 ASN73 GLY74 GLN75 ALA76 VAL77 PRO78 ALA79 ASN80 GLY81 THR82 TYR83 GLU84 PHE85 GLY86 TYR87 GLN88 MET89 HIS90 PHE91 ILE92 CYS93 ASN94 GLU95 GLY96 TYR97 TYR98 LEU99 ILE100 GLY101 GLU102 GLU103 ILE104 LEU105 TYR106 CYS107 GLU108 LEU109 LYS110 GLY111 SER112 VAL113 ALA114 ILE115 TRP116 SER117 GLY118 LYS119 PRO120 PRO121 ILE122 CYS123 GLU124 LYS125 VAL126
Unit 4 CYS1 GLU2 GLU3 PRO4 PRO5 THR6 PHE7 GLU8 ALA9 MET10 GLU11 LEU12 ILE13 GLY14 LYS15 PRO16 LYS17 PRO18 TYR19 TYR20 GLU21 ILE22 GLY23 GLU24 ARG25 VAL26 ASP27 TYR28 LYS29 CYS30 LYS31 LYS32 GLY33 TYR34 PHE35 TYR36 ILE37 PRO38 PRO39 LEU40 ALA41 THR42 HIS43 THR44 ILE45 CYS46 ASP47 ARG48 ASN49 HIS50 THR51 TRP52 LEU53 PRO54 VAL55 SER56 ASP57 ASP58 ALA59 CYS60 TYR61 ARG62 GLU63 THR64 CYS65 PRO66 TYR67 ILE68 ARG69 ASP70 PRO71 LEU72 ASN73 GLY74 GLN75 ALA76 VAL77 PRO78 ALA79 ASN80 GLY81 THR82 TYR83 GLU84 PHE85 GLY86 TYR87 GLN88 MET89 HIS90 PHE91 ILE92 CYS93 ASN94 GLU95 GLY96 TYR97 TYR98 LEU99 ILE100 GLY101 GLU102 GLU103 ILE104 LEU105 TYR106 CYS107 GLU108 LEU109 LYS110 GLY111 SER112 VAL113 ALA114 ILE115 TRP116 SER117 GLY118 LYS119 PRO120 PRO121 ILE122 CYS123 GLU124 LYS125 VAL126
Ligands
Unit 5 NAG1 NAG2 BMA3
Unit 6 NAG1 NAG2 BMA3
Unit 7 CA3081
Unit 8 CA3081 CA3082
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany