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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF A C-TERMINAL PHOSPHATASE DOMAIN OF RATT NORVEGICUS ORTHOLOG OF HUMAN PROTEIN TYROSINE PHOSPHATASE, TYPE, D (PTPRD)
Keywords PHOSPHATASE, STRUCTURAL GENOMICS, PSI, PROTEIN STRUCTURE INI NEW YORK SGX RESEARCH CENTER FOR STRUCTURAL GENOMICS, NYSGX HYDROLASE
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   2NV5     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   PTPRD, PHOSPHATASE  A 283 2287 0
2  Protein   PTPRD, PHOSPHATASE  B 283 2287 0
3  Protein   PTPRD, PHOSPHATASE  C 283 2287 0
4 Water     628 0 628
total       1477 6861 628

Proteins
Unit 1 SER1204 HIS1205 PRO1206 PRO1207 ILE1208 PRO1209 ILE1210 LEU1211 GLU1212 LEU1213 ALA1214 ASP1215 HIS1216 ILE1217 GLU1218 ARG1219 LEU1220 LYS1221 ALA1222 ASN1223 ASP1224 ASN1225 LEU1226 LYS1227 PHE1228 SER1229 GLN1230 GLU1231 TYR1232 GLU1233 SER1234 ILE1235 ASP1236 PRO1237 GLY1238 GLN1239 GLN1240 PHE1241 THR1242 TRP1243 GLU1244 HIS1245 SER1246 ASN1247 LEU1248 GLU1249 VAL1250 ASN1251 LYS1252 PRO1253 LYS1254 ASN1255 ARG1256 TYR1257 ALA1258 ASN1259 VAL1260 ILE1261 ALA1262 TYR1263 ASP1264 HIS1265 SER1266 ARG1267 VAL1268 LEU1269 LEU1270 SER1271 ALA1272 ILE1273 GLU1274 GLY1275 ILE1276 PRO1277 GLY1278 SER1279 ASP1280 TYR1281 VAL1282 ASN1283 ALA1284 ASN1285 TYR1286 ILE1287 ASP1288 GLY1289 TYR1290 ARG1291 LYS1292 GLN1293 ASN1294 ALA1295 TYR1296 ILE1297 ALA1298 THR1299 GLN1300 GLY1301 SER1302 LEU1303 PRO1304 GLU1305 THR1306 PHE1307 GLY1308 ASP1309 PHE1310 TRP1311 ARG1312 MET1313 ILE1314 TRP1315 GLU1316 GLN1317 ARG1318 SER1319 ALA1320 THR1321 VAL1322 VAL1323 MET1324 MET1325 THR1326 LYS1327 LEU1328 GLU1329 GLU1330 ARG1331 SER1332 ARG1333 VAL1334 LYS1335 CYS1336 ASP1337 GLN1338 TYR1339 TRP1340 PRO1341 SER1342 ARG1343 GLY1344 THR1345 GLU1346 THR1347 HIS1348 GLY1349 LEU1350 VAL1351 GLN1352 VAL1353 THR1354 LEU1355 LEU1356 ASP1357 THR1358 VAL1359 GLU1360 LEU1361 ALA1362 THR1363 TYR1364 CYS1365 VAL1366 ARG1367 THR1368 PHE1369 ALA1370 LEU1371 TYR1372 LYS1373 ASN1374 GLY1375 SER1376 SER1377 GLU1378 LYS1379 ARG1380 GLU1381 VAL1382 ARG1383 GLN1384 PHE1385 GLN1386 PHE1387 THR1388 ALA1389 TRP1390 PRO1391 ASP1392 HIS1393 GLY1394 VAL1395 PRO1396 GLU1397 HIS1398 PRO1399 THR1400 PRO1401 PHE1402 LEU1403 ALA1404 PHE1405 LEU1406 ARG1407 ARG1408 VAL1409 LYS1410 THR1411 CYS1412 ASN1413 PRO1414 PRO1415 ASP1416 ALA1417 GLY1418 PRO1419 MET1420 VAL1421 VAL1422 HIS1423 CYS1424 SER1425 ALA1426 GLY1427 VAL1428 GLY1429 ARG1430 THR1431 GLY1432 CYS1433 PHE1434 ILE1435 VAL1436 ILE1437 ASP1438 ALA1439 MET1440 LEU1441 GLU1442 ARG1443 ILE1444 LYS1445 HIS1446 GLU1447 LYS1448 THR1449 VAL1450 ASP1451 ILE1452 TYR1453 GLY1454 HIS1455 VAL1456 THR1457 LEU1458 MET1459 ARG1460 ALA1461 GLN1462 ARG1463 ASN1464 TYR1465 MET1466 VAL1467 GLN1468 THR1469 GLU1470 ASP1471 GLN1472 TYR1473 ILE1474 PHE1475 ILE1476 HIS1477 ASP1478 ALA1479 LEU1480 LEU1481 GLU1482 ALA1483 VAL1484 THR1485 CYS1486
Unit 2 SER1204 HIS1205 PRO1206 PRO1207 ILE1208 PRO1209 ILE1210 LEU1211 GLU1212 LEU1213 ALA1214 ASP1215 HIS1216 ILE1217 GLU1218 ARG1219 LEU1220 LYS1221 ALA1222 ASN1223 ASP1224 ASN1225 LEU1226 LYS1227 PHE1228 SER1229 GLN1230 GLU1231 TYR1232 GLU1233 SER1234 ILE1235 ASP1236 PRO1237 GLY1238 GLN1239 GLN1240 PHE1241 THR1242 TRP1243 GLU1244 HIS1245 SER1246 ASN1247 LEU1248 GLU1249 VAL1250 ASN1251 LYS1252 PRO1253 LYS1254 ASN1255 ARG1256 TYR1257 ALA1258 ASN1259 VAL1260 ILE1261 ALA1262 TYR1263 ASP1264 HIS1265 SER1266 ARG1267 VAL1268 LEU1269 LEU1270 SER1271 ALA1272 ILE1273 GLU1274 GLY1275 ILE1276 PRO1277 GLY1278 SER1279 ASP1280 TYR1281 VAL1282 ASN1283 ALA1284 ASN1285 TYR1286 ILE1287 ASP1288 GLY1289 TYR1290 ARG1291 LYS1292 GLN1293 ASN1294 ALA1295 TYR1296 ILE1297 ALA1298 THR1299 GLN1300 GLY1301 SER1302 LEU1303 PRO1304 GLU1305 THR1306 PHE1307 GLY1308 ASP1309 PHE1310 TRP1311 ARG1312 MET1313 ILE1314 TRP1315 GLU1316 GLN1317 ARG1318 SER1319 ALA1320 THR1321 VAL1322 VAL1323 MET1324 MET1325 THR1326 LYS1327 LEU1328 GLU1329 GLU1330 ARG1331 SER1332 ARG1333 VAL1334 LYS1335 CYS1336 ASP1337 GLN1338 TYR1339 TRP1340 PRO1341 SER1342 ARG1343 GLY1344 THR1345 GLU1346 THR1347 HIS1348 GLY1349 LEU1350 VAL1351 GLN1352 VAL1353 THR1354 LEU1355 LEU1356 ASP1357 THR1358 VAL1359 GLU1360 LEU1361 ALA1362 THR1363 TYR1364 CYS1365 VAL1366 ARG1367 THR1368 PHE1369 ALA1370 LEU1371 TYR1372 LYS1373 ASN1374 GLY1375 SER1376 SER1377 GLU1378 LYS1379 ARG1380 GLU1381 VAL1382 ARG1383 GLN1384 PHE1385 GLN1386 PHE1387 THR1388 ALA1389 TRP1390 PRO1391 ASP1392 HIS1393 GLY1394 VAL1395 PRO1396 GLU1397 HIS1398 PRO1399 THR1400 PRO1401 PHE1402 LEU1403 ALA1404 PHE1405 LEU1406 ARG1407 ARG1408 VAL1409 LYS1410 THR1411 CYS1412 ASN1413 PRO1414 PRO1415 ASP1416 ALA1417 GLY1418 PRO1419 MET1420 VAL1421 VAL1422 HIS1423 CYS1424 SER1425 ALA1426 GLY1427 VAL1428 GLY1429 ARG1430 THR1431 GLY1432 CYS1433 PHE1434 ILE1435 VAL1436 ILE1437 ASP1438 ALA1439 MET1440 LEU1441 GLU1442 ARG1443 ILE1444 LYS1445 HIS1446 GLU1447 LYS1448 THR1449 VAL1450 ASP1451 ILE1452 TYR1453 GLY1454 HIS1455 VAL1456 THR1457 LEU1458 MET1459 ARG1460 ALA1461 GLN1462 ARG1463 ASN1464 TYR1465 MET1466 VAL1467 GLN1468 THR1469 GLU1470 ASP1471 GLN1472 TYR1473 ILE1474 PHE1475 ILE1476 HIS1477 ASP1478 ALA1479 LEU1480 LEU1481 GLU1482 ALA1483 VAL1484 THR1485 CYS1486
Unit 3 SER1204 HIS1205 PRO1206 PRO1207 ILE1208 PRO1209 ILE1210 LEU1211 GLU1212 LEU1213 ALA1214 ASP1215 HIS1216 ILE1217 GLU1218 ARG1219 LEU1220 LYS1221 ALA1222 ASN1223 ASP1224 ASN1225 LEU1226 LYS1227 PHE1228 SER1229 GLN1230 GLU1231 TYR1232 GLU1233 SER1234 ILE1235 ASP1236 PRO1237 GLY1238 GLN1239 GLN1240 PHE1241 THR1242 TRP1243 GLU1244 HIS1245 SER1246 ASN1247 LEU1248 GLU1249 VAL1250 ASN1251 LYS1252 PRO1253 LYS1254 ASN1255 ARG1256 TYR1257 ALA1258 ASN1259 VAL1260 ILE1261 ALA1262 TYR1263 ASP1264 HIS1265 SER1266 ARG1267 VAL1268 LEU1269 LEU1270 SER1271 ALA1272 ILE1273 GLU1274 GLY1275 ILE1276 PRO1277 GLY1278 SER1279 ASP1280 TYR1281 VAL1282 ASN1283 ALA1284 ASN1285 TYR1286 ILE1287 ASP1288 GLY1289 TYR1290 ARG1291 LYS1292 GLN1293 ASN1294 ALA1295 TYR1296 ILE1297 ALA1298 THR1299 GLN1300 GLY1301 SER1302 LEU1303 PRO1304 GLU1305 THR1306 PHE1307 GLY1308 ASP1309 PHE1310 TRP1311 ARG1312 MET1313 ILE1314 TRP1315 GLU1316 GLN1317 ARG1318 SER1319 ALA1320 THR1321 VAL1322 VAL1323 MET1324 MET1325 THR1326 LYS1327 LEU1328 GLU1329 GLU1330 ARG1331 SER1332 ARG1333 VAL1334 LYS1335 CYS1336 ASP1337 GLN1338 TYR1339 TRP1340 PRO1341 SER1342 ARG1343 GLY1344 THR1345 GLU1346 THR1347 HIS1348 GLY1349 LEU1350 VAL1351 GLN1352 VAL1353 THR1354 LEU1355 LEU1356 ASP1357 THR1358 VAL1359 GLU1360 LEU1361 ALA1362 THR1363 TYR1364 CYS1365 VAL1366 ARG1367 THR1368 PHE1369 ALA1370 LEU1371 TYR1372 LYS1373 ASN1374 GLY1375 SER1376 SER1377 GLU1378 LYS1379 ARG1380 GLU1381 VAL1382 ARG1383 GLN1384 PHE1385 GLN1386 PHE1387 THR1388 ALA1389 TRP1390 PRO1391 ASP1392 HIS1393 GLY1394 VAL1395 PRO1396 GLU1397 HIS1398 PRO1399 THR1400 PRO1401 PHE1402 LEU1403 ALA1404 PHE1405 LEU1406 ARG1407 ARG1408 VAL1409 LYS1410 THR1411 CYS1412 ASN1413 PRO1414 PRO1415 ASP1416 ALA1417 GLY1418 PRO1419 MET1420 VAL1421 VAL1422 HIS1423 CYS1424 SER1425 ALA1426 GLY1427 VAL1428 GLY1429 ARG1430 THR1431 GLY1432 CYS1433 PHE1434 ILE1435 VAL1436 ILE1437 ASP1438 ALA1439 MET1440 LEU1441 GLU1442 ARG1443 ILE1444 LYS1445 HIS1446 GLU1447 LYS1448 THR1449 VAL1450 ASP1451 ILE1452 TYR1453 GLY1454 HIS1455 VAL1456 THR1457 LEU1458 MET1459 ARG1460 ALA1461 GLN1462 ARG1463 ASN1464 TYR1465 MET1466 VAL1467 GLN1468 THR1469 GLU1470 ASP1471 GLN1472 TYR1473 ILE1474 PHE1475 ILE1476 HIS1477 ASP1478 ALA1479 LEU1480 LEU1481 GLU1482 ALA1483 VAL1484 THR1485 CYS1486

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany