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Sequence, Chains, Asymmetric and Biological Units

Title HIGH RESOLUTION CRYSTAL STRUCTURE OF ESCHERICHIA COLI ENDONU (ENDO IV) Y72A MUTANT BOUND TO DAMAGED DNA
Keywords TIM-BARREL, TRINUCLEAR ZN ACTIVE SITE, HYDROLASE-DNA COMPLEX
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   2NQ9     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Other macromolecule   5'-D(*AP*TP*AP*TP*CP*T)-3'  B 6 118 0
2  Other macromolecule   5'-D(P*(3DR)P*AP*GP*AP*T)-3'  C 5 84 12
3  Other macromolecule   5'-D(*AP*TP*CP*TP*GP*AP*AP*GP*TP*AP*T)-3'  D 11 224 0
4  Protein   ENDONUCLEASE 4  A 279 2166 0
5  Ligand   ENDONUCLEASE 4  A 3 0 3
6 Water     346 0 346
total       650 2592 361

Proteins
Unit 4 MET1 LYS2 TYR3 ILE4 GLY5 ALA6 HIS7 VAL8 SER9 ALA10 ALA11 GLY12 GLY13 LEU14 ALA15 ASN16 ALA17 ALA18 ILE19 ARG20 ALA21 ALA22 GLU23 ILE24 ASP25 ALA26 THR27 ALA28 PHE29 ALA30 LEU31 PHE32 THR33 LYS34 ASN35 GLN36 ARG37 GLN38 TRP39 ARG40 ALA41 ALA42 PRO43 LEU44 THR45 THR46 GLN47 THR48 ILE49 ASP50 GLU51 PHE52 LYS53 ALA54 ALA55 CYS56 GLU57 LYS58 TYR59 HIS60 TYR61 THR62 SER63 ALA64 GLN65 ILE66 LEU67 PRO68 HIS69 ASP70 SER71 ALA72 LEU73 ILE74 ASN75 LEU76 GLY77 HIS78 PRO79 VAL80 THR81 GLU82 ALA83 LEU84 GLU85 LYS86 SER87 ARG88 ASP89 ALA90 PHE91 ILE92 ASP93 GLU94 MET95 GLN96 ARG97 CYS98 GLU99 GLN100 LEU101 GLY102 LEU103 SER104 LEU105 LEU106 ASN107 PHE108 HIS109 PRO110 GLY111 SER112 HIS113 LEU114 MET115 GLN116 ILE117 SER118 GLU119 GLU120 ASP121 CYS122 LEU123 ALA124 ARG125 ILE126 ALA127 GLU128 SER129 ILE130 ASN131 ILE132 ALA133 LEU134 ASP135 LYS136 THR137 GLN138 GLY139 VAL140 THR141 ALA142 VAL143 ILE144 GLU145 ASN146 THR147 ALA148 GLY149 GLN150 GLY151 SER152 ASN153 LEU154 GLY155 PHE156 LYS157 PHE158 GLU159 HIS160 LEU161 ALA162 ALA163 ILE164 ILE165 ASP166 GLY167 VAL168 GLU169 ASP170 LYS171 SER172 ARG173 VAL174 GLY175 VAL176 CYS177 ILE178 ASP179 THR180 CYS181 HIS182 ALA183 PHE184 ALA185 ALA186 GLY187 TYR188 ASP189 LEU190 ARG191 THR192 PRO193 ALA194 GLU195 CYS196 GLU197 LYS198 THR199 PHE200 ALA201 ASP202 PHE203 ALA204 ARG205 THR206 VAL207 GLY208 PHE209 LYS210 TYR211 LEU212 ARG213 GLY214 MET215 HIS216 LEU217 ASN218 ASP219 ALA220 LYS221 SER222 THR223 PHE224 GLY225 SER226 ARG227 VAL228 ASP229 ARG230 HIS231 HIS232 SER233 LEU234 GLY235 GLU236 GLY237 ASN238 ILE239 GLY240 HIS241 ASP242 ALA243 PHE244 ARG245 TRP246 ILE247 MET248 GLN249 ASP250 ASP251 ARG252 PHE253 ASP254 GLY255 ILE256 PRO257 LEU258 ILE259 LEU260 GLU261 THR262 ILE263 ASN264 PRO265 ASP266 ILE267 TRP268 ALA269 GLU270 GLU271 ILE272 ALA273 TRP274 LEU275 LYS276 ALA277 GLN278 GLN279

Other macromolecules
Unit 1 DA301 DT302 DA303 DT304 DC305 DT306
Unit 2 3DR307 DA308 DG309 DA310 DT311
Unit 3 DA335 DT336 DC337 DT338 DG339 DA340 DA341 DG342 DT343 DA344 DT345

Ligands
Unit 5 ZN401 ZN402 ZN403

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany