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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF HUMAN CYSTATHIONINE GAMMA LYASE
Keywords AMINO-ACID BIOSYNTHESIS, LYASE, PYRIDOXAL PHOPSHATE, STRUCTU GENOMICS, STRUCTURAL GENOMICS CONSORTIUM, SGC
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   2NMP     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   CYSTATHIONINE GAMMA-LYASE  A 376 2914 0
2  Protein   CYSTATHIONINE GAMMA-LYASE  B 376 2906 0
3  Protein   CYSTATHIONINE GAMMA-LYASE  C 390 3015 0
4  Protein   CYSTATHIONINE GAMMA-LYASE  D 390 3011 0
5  Ligand   CYSTATHIONINE GAMMA-LYASE  A 1 0 15
6  Ligand   CYSTATHIONINE GAMMA-LYASE  C 1 0 15
7  Ligand   CYSTATHIONINE GAMMA-LYASE  D 1 0 15
8 Water     157 0 157
total       1692 11846 202

Proteins
Unit 1 GLY10 PHE11 LEU12 PRO13 HIS14 PHE15 GLN16 HIS17 PHE18 ALA19 THR20 GLN21 ALA22 ILE23 HIS24 VAL25 GLY26 GLN27 ASP28 PRO29 GLU30 GLN31 TRP32 THR33 SER34 ARG35 ALA36 VAL37 VAL38 PRO39 PRO40 ILE41 SER42 LEU43 SER44 THR45 THR46 PHE47 LYS48 GLN49 GLY64 ASN65 PRO66 THR67 ARG68 ASN69 CYS70 LEU71 GLU72 LYS73 ALA74 VAL75 ALA76 ALA77 LEU78 ASP79 GLY80 ALA81 LYS82 TYR83 CYS84 LEU85 ALA86 PHE87 ALA88 SER89 GLY90 LEU91 ALA92 ALA93 THR94 VAL95 THR96 ILE97 THR98 HIS99 LEU100 LEU101 LYS102 ALA103 GLY104 ASP105 GLN106 ILE107 ILE108 CYS109 MET110 ASP111 ASP112 VAL113 TYR114 GLY115 GLY116 THR117 ASN118 ARG119 TYR120 PHE121 ARG122 GLN123 VAL124 ALA125 SER126 GLU127 PHE128 GLY129 LEU130 LYS131 ILE132 SER133 PHE134 VAL135 ASP136 CYS137 SER138 LYS139 ILE140 LYS141 LEU142 LEU143 GLU144 ALA145 ALA146 ILE147 THR148 PRO149 GLU150 THR151 LYS152 LEU153 VAL154 TRP155 ILE156 GLU157 THR158 PRO159 THR160 ASN161 PRO162 THR163 GLN164 LYS165 VAL166 ILE167 ASP168 ILE169 GLU170 GLY171 CYS172 ALA173 HIS174 ILE175 VAL176 HIS177 LYS178 HIS179 GLY180 ASP181 ILE182 ILE183 LEU184 VAL185 VAL186 ASP187 ASN188 THR189 PHE190 MET191 SER192 PRO193 TYR194 PHE195 GLN196 ARG197 PRO198 LEU199 ALA200 LEU201 GLY202 ALA203 ASP204 ILE205 SER206 MET207 TYR208 SER209 ALA210 THR211 LYS212 TYR213 MET214 ASN215 GLY216 HIS217 SER218 ASP219 VAL220 VAL221 MET222 GLY223 LEU224 VAL225 SER226 VAL227 ASN228 CYS229 GLU230 SER231 LEU232 HIS233 ASN234 ARG235 LEU236 ARG237 PHE238 LEU239 GLN240 ASN241 SER242 LEU243 GLY244 ALA245 VAL246 PRO247 SER248 PRO249 ILE250 ASP251 CYS252 TYR253 LEU254 CYS255 ASN256 ARG257 GLY258 LEU259 LYS260 THR261 LEU262 HIS263 VAL264 ARG265 MET266 GLU267 LYS268 HIS269 PHE270 LYS271 ASN272 GLY273 MET274 ALA275 VAL276 ALA277 GLN278 PHE279 LEU280 GLU281 SER282 ASN283 PRO284 TRP285 VAL286 GLU287 LYS288 VAL289 ILE290 TYR291 PRO292 GLY293 LEU294 PRO295 SER296 HIS297 PRO298 GLN299 HIS300 GLU301 LEU302 VAL303 LYS304 ARG305 GLN306 CYS307 THR308 GLY309 CYS310 THR311 GLY312 MET313 VAL314 THR315 PHE316 TYR317 ILE318 LYS319 GLY320 THR321 LEU322 GLN323 HIS324 ALA325 GLU326 ILE327 PHE328 LEU329 LYS330 ASN331 LEU332 LYS333 LEU334 PHE335 THR336 LEU337 ALA338 GLU339 SER340 LEU341 GLY342 GLY343 PHE344 GLU345 SER346 LEU347 ALA348 GLU349 LEU350 PRO351 ALA352 ILE353 MET354 THR355 HIS356 ALA357 SER358 VAL359 LEU360 LYS361 ASN362 ASP363 ARG364 ASP365 VAL366 LEU367 GLY368 ILE369 SER370 ASP371 THR372 LEU373 ILE374 ARG375 LEU376 SER377 VAL378 GLY379 LEU380 GLU381 ASP382 GLU383 GLU384 ASP385 LEU386 LEU387 GLU388 ASP389 LEU390 ASP391 GLN392 ALA393 LEU394 LYS395 ALA396 ALA397 HIS398 PRO399
Unit 2 GLY10 PHE11 LEU12 PRO13 HIS14 PHE15 GLN16 HIS17 PHE18 ALA19 THR20 GLN21 ALA22 ILE23 HIS24 VAL25 GLY26 GLN27 ASP28 PRO29 GLU30 GLN31 TRP32 THR33 SER34 ARG35 ALA36 VAL37 VAL38 PRO39 PRO40 ILE41 SER42 LEU43 SER44 THR45 THR46 PHE47 LYS48 GLN49 GLY50 ALA51 PRO52 GLY53 GLN54 HIS55 SER56 GLY57 PHE58 GLU59 TYR60 SER61 ARG62 SER63 GLY64 ASN65 PRO66 THR67 ARG68 ASN69 CYS70 LEU71 GLU72 LYS73 ALA74 VAL75 ALA76 ALA77 LEU78 ASP79 GLY80 ALA81 LYS82 TYR83 CYS84 LEU85 ALA86 PHE87 ALA88 SER89 GLY90 LEU91 ALA92 ALA93 THR94 VAL95 THR96 ILE97 THR98 HIS99 LEU100 LEU101 LYS102 ALA103 GLY104 ASP105 GLN106 ILE107 ILE108 CYS109 MET110 ASP111 ASP112 VAL113 TYR114 GLY115 GLY116 THR117 ASN118 ARG119 TYR120 PHE121 ARG122 GLN123 VAL124 ALA125 SER126 GLU127 PHE128 GLY129 LEU130 LYS131 ILE132 SER133 PHE134 VAL135 ASP136 CYS137 SER138 LYS139 ILE140 LYS141 LEU142 LEU143 GLU144 ALA145 ALA146 ILE147 THR148 PRO149 GLU150 THR151 LYS152 LEU153 VAL154 TRP155 ILE156 GLU157 THR158 PRO159 THR160 ASN161 PRO162 THR163 GLN164 LYS165 VAL166 ILE167 ASP168 ILE169 GLU170 GLY171 CYS172 ALA173 HIS174 ILE175 VAL176 HIS177 LYS178 HIS179 GLY180 ASP181 ILE182 ILE183 LEU184 VAL185 VAL186 ASP187 ASN188 THR189 PHE190 MET191 SER192 PRO193 TYR194 PHE195 GLN196 ARG197 PRO198 LEU199 ALA200 LEU201 GLY202 ALA203 ASP204 ILE205 SER206 MET207 TYR208 SER209 ALA210 THR211 LYS212 TYR213 MET214 ASN215 GLY216 HIS217 SER218 ASP219 VAL220 VAL221 MET222 GLY223 LEU224 VAL225 SER226 VAL227 ASN228 CYS229 GLU230 SER231 LEU232 HIS233 ASN234 ARG235 LEU236 ARG237 PHE238 LEU239 GLN240 ASN241 SER242 LEU243 GLY244 ALA245 VAL246 PRO247 SER248 PRO249 ILE250 ASP251 CYS252 TYR253 LEU254 CYS255 ASN256 ARG257 GLY258 LEU259 LYS260 THR261 LEU262 HIS263 VAL264 ARG265 MET266 GLU267 LYS268 HIS269 PHE270 LYS271 ASN272 GLY273 MET274 ALA275 VAL276 ALA277 GLN278 PHE279 LEU280 GLU281 SER282 ASN283 PRO284 TRP285 VAL286 GLU287 LYS288 VAL289 ILE290 TYR291 PRO292 GLY293 LEU294 PRO295 SER296 HIS297 PRO298 GLN299 HIS300 GLU301 LEU302 VAL303 LYS304 ARG305 GLN306 CYS307 THR308 GLY309 CYS310 THR311 GLY312 MET313 VAL314 THR315 PHE316 TYR317 ILE318 LYS319 GLY320 THR321 LEU322 GLN323 HIS324 ALA325 GLU326 ILE327 PHE328 LEU329 LYS330 ASN331 LEU332 LYS333 LEU334 PHE335 THR336 LEU337 ALA338 GLU339 SER340 LEU341 GLY342 GLY343 PHE344 GLU345 SER346 LEU347 ALA348 GLU349 LEU350 PRO351 ALA352 ILE353 ILE369 SER370 ASP371 THR372 LEU373 ILE374 ARG375 LEU376 SER377 VAL378 GLY379 LEU380 GLU381 ASP382 GLU383 GLU384 ASP385 LEU386 LEU387 GLU388 ASP389 LEU390 ASP391 GLN392 ALA393 LEU394 LYS395 ALA396 ALA397 HIS398 PRO399 PRO400
Unit 3 GLY10 PHE11 LEU12 PRO13 HIS14 PHE15 GLN16 HIS17 PHE18 ALA19 THR20 GLN21 ALA22 ILE23 HIS24 VAL25 GLY26 GLN27 ASP28 PRO29 GLU30 GLN31 TRP32 THR33 SER34 ARG35 ALA36 VAL37 VAL38 PRO39 PRO40 ILE41 SER42 LEU43 SER44 THR45 THR46 PHE47 LYS48 GLN49 GLY50 ALA51 PRO52 GLY53 GLN54 GLY57 PHE58 GLU59 TYR60 SER61 ARG62 SER63 GLY64 ASN65 PRO66 THR67 ARG68 ASN69 CYS70 LEU71 GLU72 LYS73 ALA74 VAL75 ALA76 ALA77 LEU78 ASP79 GLY80 ALA81 LYS82 TYR83 CYS84 LEU85 ALA86 PHE87 ALA88 SER89 GLY90 LEU91 ALA92 ALA93 THR94 VAL95 THR96 ILE97 THR98 HIS99 LEU100 LEU101 LYS102 ALA103 GLY104 ASP105 GLN106 ILE107 ILE108 CYS109 MET110 ASP111 ASP112 VAL113 TYR114 GLY115 GLY116 THR117 ASN118 ARG119 TYR120 PHE121 ARG122 GLN123 VAL124 ALA125 SER126 GLU127 PHE128 GLY129 LEU130 LYS131 ILE132 SER133 PHE134 VAL135 ASP136 CYS137 SER138 LYS139 ILE140 LYS141 LEU142 LEU143 GLU144 ALA145 ALA146 ILE147 THR148 PRO149 GLU150 THR151 LYS152 LEU153 VAL154 TRP155 ILE156 GLU157 THR158 PRO159 THR160 ASN161 PRO162 THR163 GLN164 LYS165 VAL166 ILE167 ASP168 ILE169 GLU170 GLY171 CYS172 ALA173 HIS174 ILE175 VAL176 HIS177 LYS178 HIS179 GLY180 ASP181 ILE182 ILE183 LEU184 VAL185 VAL186 ASP187 ASN188 THR189 PHE190 MET191 SER192 PRO193 TYR194 PHE195 GLN196 ARG197 PRO198 LEU199 ALA200 LEU201 GLY202 ALA203 ASP204 ILE205 SER206 MET207 TYR208 SER209 ALA210 THR211 LYS212 TYR213 MET214 ASN215 GLY216 HIS217 SER218 ASP219 VAL220 VAL221 MET222 GLY223 LEU224 VAL225 SER226 VAL227 ASN228 CYS229 GLU230 SER231 LEU232 HIS233 ASN234 ARG235 LEU236 ARG237 PHE238 LEU239 GLN240 ASN241 SER242 LEU243 GLY244 ALA245 VAL246 PRO247 SER248 PRO249 ILE250 ASP251 CYS252 TYR253 LEU254 CYS255 ASN256 ARG257 GLY258 LEU259 LYS260 THR261 LEU262 HIS263 VAL264 ARG265 MET266 GLU267 LYS268 HIS269 PHE270 LYS271 ASN272 GLY273 MET274 ALA275 VAL276 ALA277 GLN278 PHE279 LEU280 GLU281 SER282 ASN283 PRO284 TRP285 VAL286 GLU287 LYS288 VAL289 ILE290 TYR291 PRO292 GLY293 LEU294 PRO295 SER296 HIS297 PRO298 GLN299 HIS300 GLU301 LEU302 VAL303 LYS304 ARG305 GLN306 CYS307 THR308 GLY309 CYS310 THR311 GLY312 MET313 VAL314 THR315 PHE316 TYR317 ILE318 LYS319 GLY320 THR321 LEU322 GLN323 HIS324 ALA325 GLU326 ILE327 PHE328 LEU329 LYS330 ASN331 LEU332 LYS333 LEU334 PHE335 THR336 LEU337 ALA338 GLU339 SER340 LEU341 GLY342 GLY343 PHE344 GLU345 SER346 LEU347 ALA348 GLU349 LEU350 PRO351 ALA352 ILE353 MET354 THR355 HIS356 ALA357 SER358 VAL359 LEU360 LYS361 ASN362 ASP363 ARG364 ASP365 VAL366 LEU367 GLY368 ILE369 SER370 ASP371 THR372 LEU373 ILE374 ARG375 LEU376 SER377 VAL378 GLY379 LEU380 GLU381 ASP382 GLU383 GLU384 ASP385 LEU386 LEU387 GLU388 ASP389 LEU390 ASP391 GLN392 ALA393 LEU394 LYS395 ALA396 ALA397 HIS398 PRO399 PRO400 SER401
Unit 4 GLY10 PHE11 LEU12 PRO13 HIS14 PHE15 GLN16 HIS17 PHE18 ALA19 THR20 GLN21 ALA22 ILE23 HIS24 VAL25 GLY26 GLN27 ASP28 PRO29 GLU30 GLN31 TRP32 THR33 SER34 ARG35 ALA36 VAL37 VAL38 PRO39 PRO40 ILE41 SER42 LEU43 SER44 THR45 THR46 PHE47 LYS48 GLN49 GLY50 ALA51 PRO52 GLY53 GLN54 HIS55 SER56 GLY57 PHE58 GLU59 TYR60 SER61 ARG62 SER63 GLY64 ASN65 PRO66 THR67 ARG68 ASN69 CYS70 LEU71 GLU72 LYS73 ALA74 VAL75 ALA76 ALA77 LEU78 ASP79 GLY80 ALA81 LYS82 TYR83 CYS84 LEU85 ALA86 PHE87 ALA88 SER89 GLY90 LEU91 ALA92 ALA93 THR94 VAL95 THR96 ILE97 THR98 HIS99 LEU100 LEU101 LYS102 ALA103 GLY104 ASP105 GLN106 ILE107 ILE108 CYS109 MET110 ASP111 ASP112 VAL113 TYR114 GLY115 GLY116 THR117 ASN118 ARG119 TYR120 PHE121 ARG122 GLN123 VAL124 ALA125 SER126 GLU127 PHE128 GLY129 LEU130 LYS131 ILE132 SER133 PHE134 VAL135 ASP136 CYS137 SER138 LYS139 ILE140 LYS141 LEU142 LEU143 GLU144 ALA145 ALA146 ILE147 THR148 PRO149 GLU150 THR151 LYS152 LEU153 VAL154 TRP155 ILE156 GLU157 THR158 PRO159 THR160 ASN161 PRO162 THR163 GLN164 LYS165 VAL166 ILE167 ASP168 ILE169 GLU170 GLY171 CYS172 ALA173 HIS174 ILE175 VAL176 HIS177 LYS178 HIS179 GLY180 ASP181 ILE182 ILE183 LEU184 VAL185 VAL186 ASP187 ASN188 THR189 PHE190 MET191 SER192 PRO193 TYR194 PHE195 GLN196 ARG197 PRO198 LEU199 ALA200 LEU201 GLY202 ALA203 ASP204 ILE205 SER206 MET207 TYR208 SER209 ALA210 THR211 LYS212 TYR213 MET214 ASN215 GLY216 HIS217 SER218 ASP219 VAL220 VAL221 MET222 GLY223 LEU224 VAL225 SER226 VAL227 ASN228 CYS229 GLU230 SER231 LEU232 HIS233 ASN234 ARG235 LEU236 ARG237 PHE238 LEU239 GLN240 ASN241 SER242 LEU243 GLY244 ALA245 VAL246 PRO247 SER248 PRO249 ILE250 ASP251 CYS252 TYR253 LEU254 CYS255 ASN256 ARG257 GLY258 LEU259 LYS260 THR261 LEU262 HIS263 VAL264 ARG265 MET266 GLU267 LYS268 HIS269 PHE270 LYS271 ASN272 GLY273 MET274 ALA275 VAL276 ALA277 GLN278 PHE279 LEU280 GLU281 SER282 ASN283 PRO284 TRP285 VAL286 GLU287 LYS288 VAL289 ILE290 TYR291 PRO292 GLY293 LEU294 PRO295 SER296 HIS297 PRO298 GLN299 HIS300 GLU301 LEU302 VAL303 LYS304 ARG305 GLN306 CYS307 THR308 GLY309 CYS310 THR311 GLY312 MET313 VAL314 THR315 PHE316 TYR317 ILE318 LYS319 GLY320 THR321 LEU322 GLN323 HIS324 ALA325 GLU326 ILE327 PHE328 LEU329 LYS330 ASN331 LEU332 LYS333 LEU334 PHE335 THR336 LEU337 ALA338 GLU339 SER340 LEU341 GLY342 GLY343 PHE344 GLU345 SER346 LEU347 ALA348 GLU349 LEU350 PRO351 ALA352 ILE353 MET354 THR355 HIS356 ALA357 SER358 LYS361 ASN362 ASP363 ARG364 ASP365 VAL366 LEU367 GLY368 ILE369 SER370 ASP371 THR372 LEU373 ILE374 ARG375 LEU376 SER377 VAL378 GLY379 LEU380 GLU381 ASP382 GLU383 GLU384 ASP385 LEU386 LEU387 GLU388 ASP389 LEU390 ASP391 GLN392 ALA393 LEU394 LYS395 ALA396 ALA397 HIS398 PRO399 PRO400 SER401

Ligands
Unit 5 PLP500
Unit 6 PLP500
Unit 7 PLP500

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany