Jena Library of Biological Macromolecules - Home Page [Image Library Home] [Image Library Entry]

Sequence, Chains, Asymmetric and Biological Units

Title NMR STRUCTURE OF THE II-III-VI THREE-WAY JUNCTION FROM THE V AND IDENTIFICATION OF MAGNESIUM-BINDING SITES USING PARAMAG RELAXATION ENHANCEMENT
Keywords RNA, VS RIBOZYME, CATALYSIS, MG2+ IONS
Experiment NMR
Number of Models  21


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   2N3R     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  RNA    A 62 2000 0
2  Ligand   RNA (62-MER)  A 8 0 8
3 Water     48 0 48
total       118 2000 56

Nucleic acids
Unit 1 G1 C2 A3 G4 C5 A6 G7 G8 G9 A10 A11 C12 U13 C14 A15 C16 G17 C18 U19 U20 G21 C22 G23 U24 A25 G26 A27 G28 G29 C30 U31 A32 A33 G34 U35 G36 C37 U38 U39 C40 G41 G42 C43 A44 C45 A46 G47 C48 A49 C50 A51 A52 G53 C54 C55 C56 G57 C58 U59 G60 C61 G62

Ligands
Unit 2 MG101 MG102 MG103 MG104 MG105 MG106 MG107 MG108

Chirality of ribose and phosphate atoms

Check the naming of phosphate and ribose substituents. Recommended for phosphate oxygens and for ribose hydrogens in NMR structures.


Go to    [Image Library Home]    [Image Library Entry]
Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany