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Title | STRUCTURE OF PTB RRM1(41-163) BOUND TO AN RNA STEMLOOP CONTA STRUCTURED LOOP DERIVED FROM VIRAL INTERNAL RIBOSOMAL ENTRY | |
Keywords | POLYPYIRIMINE TRACT BINDING PROTEIN, IRES, PTB, C-TERMINAL H FORMATION, RNA BINDING PROTEIN-RNA COMPLEX | |
Experiment | NMR | |
Number of Models | 20 |
Database | ID code | Status | Coordinate files | ||
Header | Asymmetric unit | Biological unit | |||
PDB | 2N3O | released | available | available | Quaternary Structure Server |
Unit | Type | Name | Chain ID | Residues | Atoms | Hetatoms |
---|---|---|---|---|---|---|
1 | Protein | POLYPYRIMIDINE TRACT-BINDING PROTEIN 1 | A | 123 | 1892 | 0 |
2 | RNA | B | 23 | 729 | 0 | |
total | 146 | 2621 | 0 |
Unit 1 | GLY41 ASN42 ASP43 SER44 LYS45 LYS46 PHE47 LYS48 GLY49 ASP50 SER51 ARG52 SER53 ALA54 GLY55 VAL56 PRO57 SER58 ARG59 VAL60 ILE61 HIS62 ILE63 ARG64 LYS65 LEU66 PRO67 ILE68 ASP69 VAL70 THR71 GLU72 GLY73 GLU74 VAL75 ILE76 SER77 LEU78 GLY79 LEU80 PRO81 PHE82 GLY83 LYS84 VAL85 THR86 ASN87 LEU88 LEU89 MET90 LEU91 LYS92 GLY93 LYS94 ASN95 GLN96 ALA97 PHE98 ILE99 GLU100 MET101 ASN102 THR103 GLU104 GLU105 ALA106 ALA107 ASN108 THR109 MET110 VAL111 ASN112 TYR113 TYR114 THR115 SER116 VAL117 THR118 PRO119 VAL120 LEU121 ARG122 GLY123 GLN124 PRO125 ILE126 TYR127 ILE128 GLN129 PHE130 SER131 ASN132 HIS133 LYS134 GLU135 LEU136 LYS137 THR138 ASP139 SER140 SER141 PRO142 ASN143 GLN144 ALA145 ARG146 ALA147 GLN148 ALA149 ALA150 LEU151 GLN152 ALA153 VAL154 ASN155 SER156 VAL157 GLN158 SER159 GLY160 ASN161 LEU162 ALA163 |
Unit 2 | G1 G2 G3 A4 C5 C6 U7 G8 G9 U10 C11 U12 U13 U14 C15 C16 A17 G18 G19 U20 C21 C22 C23 |
Check the naming of phosphate and ribose substituents. Recommended for phosphate oxygens and for ribose hydrogens in NMR structures.
Perl script: | PDBscan.pl (15 Sep 2016) |
Author: | Peter Slickers (slickers@leibniz-fli.de), IMB Jena, Germany |