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Sequence, Chains, Asymmetric and Biological Units

Title NMR DATA-DRIVEN MODEL OF GTPASE KRAS-GNP:ARAFRBD COMPLEX TET LIPID-BILAYER NANODISC
Keywords K-RAS, NANODISC, PRE, DOCKING, A-RAFRBD, LIPID BINDING PROTE
Experiment NMR
Number of Models  10


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   2MSE     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   APOLIPOPROTEIN A-I  A 198 1645 0
2  Protein   APOLIPOPROTEIN A-I  C 198 1646 0
3  Protein   GTPASE KRAS  B 185 1492 0
4  Protein   SERINE/THREONINE-PROTEIN KINASE A-RAF  D 73 573 0
5  Ligand   APOLIPOPROTEIN A-I  A 80 0 4320
6  Ligand   GTPASE KRAS  B 2 0 33
total       736 5356 4353

Proteins
Unit 1 LEU201 LYS202 LEU203 LEU204 ASP205 ASN206 TRP207 ASP208 SER209 VAL210 THR211 SER212 THR213 PHE214 SER215 LYS216 LEU217 ARG218 GLU219 GLN220 LEU221 GLY222 PRO223 VAL224 THR225 GLN226 GLU227 PHE228 TRP229 ASP230 ASN231 LEU232 GLU233 LYS234 GLU235 THR236 GLU237 GLY238 LEU239 ARG240 GLN241 GLU242 MET243 SER244 LYS245 ASP246 LEU247 GLU248 GLU249 VAL250 LYS251 ALA252 LYS253 VAL254 GLN255 PRO256 TYR257 LEU258 ASP259 ASP260 PHE261 GLN262 LYS263 LYS264 TRP265 GLN266 GLU267 GLU268 MET269 GLU270 LEU271 TYR272 ARG273 GLN274 LYS275 VAL276 GLU277 PRO278 LEU279 ARG280 ALA281 GLU282 LEU283 GLN284 GLU285 GLY286 ALA287 ARG288 GLN289 LYS290 LEU291 HIS292 GLU293 LEU294 GLN295 GLU296 LYS297 LEU298 SER299 PRO300 LEU301 GLY302 GLU303 GLU304 MET305 ARG306 ASP307 ARG308 ALA309 ARG310 ALA311 HIS312 VAL313 ASP314 ALA315 LEU316 ARG317 THR318 HIS319 LEU320 ALA321 PRO322 TYR323 SER324 ASP325 GLU326 LEU327 ARG328 GLN329 ARG330 LEU331 ALA332 ALA333 ARG334 LEU335 GLU336 ALA337 LEU338 LYS339 GLU340 ASN341 GLY342 GLY343 ALA344 ARG345 LEU346 ALA347 GLU348 TYR349 HIS350 ALA351 LYS352 ALA353 THR354 GLU355 HIS356 LEU357 SER358 THR359 LEU360 SER361 GLU362 LYS363 ALA364 LYS365 PRO366 ALA367 LEU368 GLU369 ASP370 LEU371 ARG372 GLN373 GLY374 LEU375 LEU376 PRO377 VAL378 LEU379 GLU380 SER381 PHE382 LYS383 VAL384 SER385 PHE386 LEU387 SER388 ALA389 LEU390 GLU391 GLU392 TYR393 THR394 LYS395 LYS396 LEU397 ASN398
Unit 2 LEU399 LYS400 LEU401 LEU402 ASP403 ASN404 TRP405 ASP406 SER407 VAL408 THR409 SER410 THR411 PHE412 SER413 LYS414 LEU415 ARG416 GLU417 GLN418 LEU419 GLY420 PRO421 VAL422 THR423 GLN424 GLU425 PHE426 TRP427 ASP428 ASN429 LEU430 GLU431 LYS432 GLU433 THR434 GLU435 GLY436 LEU437 ARG438 GLN439 GLU440 MET441 SER442 LYS443 ASP444 LEU445 GLU446 GLU447 VAL448 LYS449 ALA450 LYS451 VAL452 GLN453 PRO454 TYR455 LEU456 ASP457 ASP458 PHE459 GLN460 LYS461 LYS462 TRP463 GLN464 GLU465 GLU466 MET467 GLU468 LEU469 TYR470 ARG471 GLN472 LYS473 VAL474 GLU475 PRO476 LEU477 ARG478 ALA479 GLU480 LEU481 GLN482 GLU483 GLY484 ALA485 ARG486 GLN487 LYS488 LEU489 HIS490 GLU491 LEU492 GLN493 GLU494 LYS495 LEU496 SER497 PRO498 LEU499 GLY500 GLU501 GLU502 MET503 ARG504 ASP505 ARG506 ALA507 ARG508 ALA509 HIS510 VAL511 ASP512 ALA513 LEU514 ARG515 THR516 HIS517 LEU518 ALA519 PRO520 TYR521 SER522 ASP523 GLU524 LEU525 ARG526 GLN527 ARG528 LEU529 ALA530 ALA531 ARG532 LEU533 GLU534 ALA535 LEU536 LYS537 GLU538 ASN539 GLY540 GLY541 ALA542 ARG543 LEU544 ALA545 GLU546 TYR547 HIS548 ALA549 LYS550 ALA551 THR552 GLU553 HIS554 LEU555 SER556 THR557 LEU558 SER559 GLU560 LYS561 ALA562 LYS563 PRO564 ALA565 LEU566 GLU567 ASP568 LEU569 ARG570 GLN571 GLY572 LEU573 LEU574 PRO575 VAL576 LEU577 GLU578 SER579 PHE580 LYS581 VAL582 SER583 PHE584 LEU585 SER586 ALA587 LEU588 GLU589 GLU590 TYR591 THR592 LYS593 LYS594 LEU595 ASN596
Unit 3 MET1 THR2 GLU3 TYR4 LYS5 LEU6 VAL7 VAL8 VAL9 GLY10 ALA11 GLY12 GLY13 VAL14 GLY15 LYS16 SER17 ALA18 LEU19 THR20 ILE21 GLN22 LEU23 ILE24 GLN25 ASN26 HIS27 PHE28 VAL29 ASP30 GLU31 TYR32 ASP33 PRO34 THR35 ILE36 GLU37 ASP38 SER39 TYR40 ARG41 LYS42 GLN43 VAL44 VAL45 ILE46 ASP47 GLY48 GLU49 THR50 CYS51 LEU52 LEU53 ASP54 ILE55 LEU56 ASP57 THR58 ALA59 GLY60 GLN61 GLU62 GLU63 TYR64 SER65 ALA66 MET67 ARG68 ASP69 GLN70 TYR71 MET72 ARG73 THR74 GLY75 GLU76 GLY77 PHE78 LEU79 CYS80 VAL81 PHE82 ALA83 ILE84 ASN85 ASN86 THR87 LYS88 SER89 PHE90 GLU91 ASP92 ILE93 HIS94 HIS95 TYR96 ARG97 GLU98 GLN99 ILE100 LYS101 ARG102 VAL103 LYS104 ASP105 SER106 GLU107 ASP108 VAL109 PRO110 MET111 VAL112 LEU113 VAL114 GLY115 ASN116 LYS117 CYS118 ASP119 LEU120 PRO121 SER122 ARG123 THR124 VAL125 ASP126 THR127 LYS128 GLN129 ALA130 GLN131 ASP132 LEU133 ALA134 ARG135 SER136 TYR137 GLY138 ILE139 PRO140 PHE141 ILE142 GLU143 THR144 SER145 ALA146 LYS147 THR148 ARG149 GLN150 GLY151 VAL152 ASP153 ASP154 ALA155 PHE156 TYR157 THR158 LEU159 VAL160 ARG161 GLU162 ILE163 ARG164 LYS165 HIS166 LYS167 GLU168 LYS169 MET170 SER171 LYS172 ASP173 GLY174 LYS175 LYS176 LYS177 LYS178 LYS179 LYS180 SER181 LYS182 THR183 LYS184 CYS185
Unit 4 GLY808 THR809 VAL810 LYS811 VAL812 TYR813 LEU814 PRO815 ASN816 LYS817 GLN818 ARG819 THR820 VAL821 VAL822 THR823 VAL824 ARG825 ASP826 GLY827 MET828 SER829 VAL830 TYR831 ASP832 SER833 LEU834 ASP835 LYS836 ALA837 LEU838 LYS839 VAL840 ARG841 GLY842 LEU843 ASN844 GLN845 ASP846 CYS847 CYS848 VAL849 VAL850 TYR851 ARG852 LEU853 ILE854 LYS855 GLY856 ARG857 LYS858 THR859 VAL860 THR861 ALA862 TRP863 ASP864 THR865 ALA866 ILE867 ALA868 PRO869 LEU870 ASP871 GLY872 GLU873 GLU874 LEU875 ILE876 VAL877 GLU878 VAL879 LEU880

Ligands
Unit 5 PCW1 PCW2 PCW3 PCW4 PCW5 PCW6 PCW7 PCW8 PCW9 PCW10 PCW11 PCW12 PCW13 PCW14 PCW15 PCW16 PCW17 PCW18 PCW19 PCW20 PCW21 PCW22 PCW23 PCW24 PCW25 PCW26 PCW27 PCW28 PCW29 PCW30 PCW31 PCW32 17F33 17F34 17F35 17F36 17F37 17F38 17F39 17F40 PCW41 PCW42 PCW43 PCW44 PCW45 PCW46 PCW47 PCW48 PCW49 PCW50 PCW51 PCW52 PCW53 PCW54 PCW55 PCW56 PCW57 PCW58 PCW59 PCW60 PCW61 PCW62 PCW63 PCW64 PCW65 PCW66 PCW67 PCW68 PCW69 PCW70 PCW71 PCW72 17F73 17F74 17F75 17F76 17F77 17F78 17F79 17F80
Unit 6 GNP201 MG202

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany