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Sequence, Chains, Asymmetric and Biological Units

Title SOLUTION NMR STRUCTURE OF THE U5-PRIMER BINDING SITE (U5-PBS OF MURINE LEUKEMIA VIRUS RNA GENOME
Keywords RNA, U5-PRIMER BINDING SITE, U5-PBS, YNMG TETRALOOP
Experiment NMR
Number of Models  10


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   2MQT     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  RNA    A 68 2179 0
total       68 2179 0

Nucleic acids
Unit 1 G93 G94 G95 C96 G97 A98 G99 G100 G101 U102 C103 U104 C105 C106 U107 C108 U109 G110 A111 G112 U113 G114 A115 U116 U117 G118 A119 C120 U121 A122 C123 C124 C125 G126 U127 C128 A129 G130 C131 G132 G133 G134 G135 G136 U137 C138 U139 U140 U141 C142 A143 U144 U145 U146 G147 G148 G149 G150 G151 C152 U153 C154 G155 U156 G157 C158 C159 C160

Chirality of ribose and phosphate atoms

Check the naming of phosphate and ribose substituents. Recommended for phosphate oxygens and for ribose hydrogens in NMR structures.


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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany