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Sequence, Chains, Asymmetric and Biological Units

Title SOLUTION NMR STRUCTURE OF A PREQ1 CLASS II RIBOSWITCH FROM STREPTOCOCCUS PNEUMONIAE
Keywords PREQ1, RIBOSWITCH, CLASSII, PSEUDOKNOT, STREPTOCOCCUS PNEUMO
Experiment NMR
Number of Models  18


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   2MIY     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  RNA    A 59 1887 0
2  Ligand   RNA_(59-MER)  A 1 0 22
total       60 1887 22

Nucleic acids
Unit 1 G-1 C1 U2 U3 G4 G5 U6 G7 C8 U9 U10 A11 G12 C13 U14 U15 C16 U17 U18 U19 C20 A21 C22 C23 A24 A25 G26 C27 A28 U29 A30 U31 U32 A33 C34 A35 C36 G37 C38 G39 G40 A41 U42 A43 A44 C45 C46 G47 C48 C49 A50 A51 A52 G53 G54 A55 G56 A57 A58

Ligands
Unit 2 PRF101

Chirality of ribose and phosphate atoms

Check the naming of phosphate and ribose substituents. Recommended for phosphate oxygens and for ribose hydrogens in NMR structures.


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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany