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Sequence, Chains, Asymmetric and Biological Units

Title NMR SOLUTION STRUCTURE OF THE D3'-HAIRPIN FROM THE SC.AI5GAM II INTRON INCLUDING THE EBS1:DIBS1 RNA:DNA HYBRID
Keywords RNA, DNA, RIBOZYME, GROUP II INTRON, HYBRID, REVERSE SPLICIN RETROHOMING, DNA-RNA COMPLEX
Experiment NMR
Number of Models  18


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   2M1V     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  RNA    A 29 927 0
2  Other macromolecule   DNA_(5'-D(*CP*AP*GP*TP*GP*TP*C)-3')_  B 7 220 0
total       36 1147 0

Nucleic acids
Unit 1 G1 G2 A3 G4 U5 A6 U7 G8 U9 A10 U11 U12 G13 G14 C15 A16 C17 U18 G19 A20 G21 C22 A23 U24 A25 C26 U27 C28 C29

Other macromolecules
Unit 2 DC59 DA60 DG61 DT62 DG63 DT64 DC65

Chirality of ribose and phosphate atoms

Check the naming of phosphate and ribose substituents. Recommended for phosphate oxygens and for ribose hydrogens in NMR structures.


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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany