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Sequence, Chains, Asymmetric and Biological Units

Title STRUCTURAL MODEL FOR A 40-RESIDUE BETA-AMYLOID FIBRIL WITH T SYMMETRY, POSITIVE STAGGER
Keywords ALZHEIMER'S DISEASE, THREE-FOLD SYMMETRY, PROTEIN FIBRIL
Experiment NMR
Number of Models  10


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   2LMP     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   BETA-AMYLOID PROTEIN 40  A 32 475 0
2  Protein   BETA-AMYLOID PROTEIN 40  B 32 475 0
3  Protein   BETA-AMYLOID PROTEIN 40  C 32 475 0
4  Protein   BETA-AMYLOID PROTEIN 40  D 32 475 0
5  Protein   BETA-AMYLOID PROTEIN 40  E 32 475 0
6  Protein   BETA-AMYLOID PROTEIN 40  F 32 475 0
7  Protein   BETA-AMYLOID PROTEIN 40  G 32 475 0
8  Protein   BETA-AMYLOID PROTEIN 40  H 32 475 0
9  Protein   BETA-AMYLOID PROTEIN 40  I 32 475 0
10  Protein   BETA-AMYLOID PROTEIN 40  J 32 475 0
11  Protein   BETA-AMYLOID PROTEIN 40  K 32 475 0
12  Protein   BETA-AMYLOID PROTEIN 40  L 32 475 0
13  Protein   BETA-AMYLOID PROTEIN 40  M 32 475 0
14  Protein   BETA-AMYLOID PROTEIN 40  N 32 475 0
15  Protein   BETA-AMYLOID PROTEIN 40  O 32 475 0
16  Protein   BETA-AMYLOID PROTEIN 40  P 32 475 0
17  Protein   BETA-AMYLOID PROTEIN 40  Q 32 475 0
18  Protein    R 32 475 0
total       576 8550 0

Proteins
Unit 1 GLY9 TYR10 GLU11 VAL12 HIS13 HIS14 GLN15 LYS16 LEU17 VAL18 PHE19 PHE20 ALA21 GLU22 ASP23 VAL24 GLY25 SER26 ASN27 LYS28 GLY29 ALA30 ILE31 ILE32 GLY33 LEU34 MET35 VAL36 GLY37 GLY38 VAL39 VAL40
Unit 2 GLY9 TYR10 GLU11 VAL12 HIS13 HIS14 GLN15 LYS16 LEU17 VAL18 PHE19 PHE20 ALA21 GLU22 ASP23 VAL24 GLY25 SER26 ASN27 LYS28 GLY29 ALA30 ILE31 ILE32 GLY33 LEU34 MET35 VAL36 GLY37 GLY38 VAL39 VAL40
Unit 3 GLY9 TYR10 GLU11 VAL12 HIS13 HIS14 GLN15 LYS16 LEU17 VAL18 PHE19 PHE20 ALA21 GLU22 ASP23 VAL24 GLY25 SER26 ASN27 LYS28 GLY29 ALA30 ILE31 ILE32 GLY33 LEU34 MET35 VAL36 GLY37 GLY38 VAL39 VAL40
Unit 4 GLY9 TYR10 GLU11 VAL12 HIS13 HIS14 GLN15 LYS16 LEU17 VAL18 PHE19 PHE20 ALA21 GLU22 ASP23 VAL24 GLY25 SER26 ASN27 LYS28 GLY29 ALA30 ILE31 ILE32 GLY33 LEU34 MET35 VAL36 GLY37 GLY38 VAL39 VAL40
Unit 5 GLY9 TYR10 GLU11 VAL12 HIS13 HIS14 GLN15 LYS16 LEU17 VAL18 PHE19 PHE20 ALA21 GLU22 ASP23 VAL24 GLY25 SER26 ASN27 LYS28 GLY29 ALA30 ILE31 ILE32 GLY33 LEU34 MET35 VAL36 GLY37 GLY38 VAL39 VAL40
Unit 6 GLY9 TYR10 GLU11 VAL12 HIS13 HIS14 GLN15 LYS16 LEU17 VAL18 PHE19 PHE20 ALA21 GLU22 ASP23 VAL24 GLY25 SER26 ASN27 LYS28 GLY29 ALA30 ILE31 ILE32 GLY33 LEU34 MET35 VAL36 GLY37 GLY38 VAL39 VAL40
Unit 7 GLY9 TYR10 GLU11 VAL12 HIS13 HIS14 GLN15 LYS16 LEU17 VAL18 PHE19 PHE20 ALA21 GLU22 ASP23 VAL24 GLY25 SER26 ASN27 LYS28 GLY29 ALA30 ILE31 ILE32 GLY33 LEU34 MET35 VAL36 GLY37 GLY38 VAL39 VAL40
Unit 8 GLY9 TYR10 GLU11 VAL12 HIS13 HIS14 GLN15 LYS16 LEU17 VAL18 PHE19 PHE20 ALA21 GLU22 ASP23 VAL24 GLY25 SER26 ASN27 LYS28 GLY29 ALA30 ILE31 ILE32 GLY33 LEU34 MET35 VAL36 GLY37 GLY38 VAL39 VAL40
Unit 9 GLY9 TYR10 GLU11 VAL12 HIS13 HIS14 GLN15 LYS16 LEU17 VAL18 PHE19 PHE20 ALA21 GLU22 ASP23 VAL24 GLY25 SER26 ASN27 LYS28 GLY29 ALA30 ILE31 ILE32 GLY33 LEU34 MET35 VAL36 GLY37 GLY38 VAL39 VAL40
Unit 10 GLY9 TYR10 GLU11 VAL12 HIS13 HIS14 GLN15 LYS16 LEU17 VAL18 PHE19 PHE20 ALA21 GLU22 ASP23 VAL24 GLY25 SER26 ASN27 LYS28 GLY29 ALA30 ILE31 ILE32 GLY33 LEU34 MET35 VAL36 GLY37 GLY38 VAL39 VAL40
Unit 11 GLY9 TYR10 GLU11 VAL12 HIS13 HIS14 GLN15 LYS16 LEU17 VAL18 PHE19 PHE20 ALA21 GLU22 ASP23 VAL24 GLY25 SER26 ASN27 LYS28 GLY29 ALA30 ILE31 ILE32 GLY33 LEU34 MET35 VAL36 GLY37 GLY38 VAL39 VAL40
Unit 12 GLY9 TYR10 GLU11 VAL12 HIS13 HIS14 GLN15 LYS16 LEU17 VAL18 PHE19 PHE20 ALA21 GLU22 ASP23 VAL24 GLY25 SER26 ASN27 LYS28 GLY29 ALA30 ILE31 ILE32 GLY33 LEU34 MET35 VAL36 GLY37 GLY38 VAL39 VAL40
Unit 13 GLY9 TYR10 GLU11 VAL12 HIS13 HIS14 GLN15 LYS16 LEU17 VAL18 PHE19 PHE20 ALA21 GLU22 ASP23 VAL24 GLY25 SER26 ASN27 LYS28 GLY29 ALA30 ILE31 ILE32 GLY33 LEU34 MET35 VAL36 GLY37 GLY38 VAL39 VAL40
Unit 14 GLY9 TYR10 GLU11 VAL12 HIS13 HIS14 GLN15 LYS16 LEU17 VAL18 PHE19 PHE20 ALA21 GLU22 ASP23 VAL24 GLY25 SER26 ASN27 LYS28 GLY29 ALA30 ILE31 ILE32 GLY33 LEU34 MET35 VAL36 GLY37 GLY38 VAL39 VAL40
Unit 15 GLY9 TYR10 GLU11 VAL12 HIS13 HIS14 GLN15 LYS16 LEU17 VAL18 PHE19 PHE20 ALA21 GLU22 ASP23 VAL24 GLY25 SER26 ASN27 LYS28 GLY29 ALA30 ILE31 ILE32 GLY33 LEU34 MET35 VAL36 GLY37 GLY38 VAL39 VAL40
Unit 16 GLY9 TYR10 GLU11 VAL12 HIS13 HIS14 GLN15 LYS16 LEU17 VAL18 PHE19 PHE20 ALA21 GLU22 ASP23 VAL24 GLY25 SER26 ASN27 LYS28 GLY29 ALA30 ILE31 ILE32 GLY33 LEU34 MET35 VAL36 GLY37 GLY38 VAL39 VAL40
Unit 17 GLY9 TYR10 GLU11 VAL12 HIS13 HIS14 GLN15 LYS16 LEU17 VAL18 PHE19 PHE20 ALA21 GLU22 ASP23 VAL24 GLY25 SER26 ASN27 LYS28 GLY29 ALA30 ILE31 ILE32 GLY33 LEU34 MET35 VAL36 GLY37 GLY38 VAL39 VAL40
Unit 18 GLY9 TYR10 GLU11 VAL12 HIS13 HIS14 GLN15 LYS16 LEU17 VAL18 PHE19 PHE20 ALA21 GLU22 ASP23 VAL24 GLY25 SER26 ASN27 LYS28 GLY29 ALA30 ILE31 ILE32 GLY33 LEU34 MET35 VAL36 GLY37 GLY38 VAL39 VAL40

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany