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Sequence, Chains, Asymmetric and Biological Units

Title RIBONUCLEOTIDE PERTURBATION OF DNA STRUCTURE: SOLUTION STRUC [D(CGC)R(G)D(AATTCGCG)]2
Keywords RIBONUCLEOTIDE SUBSTITUTED DNA, DNA, RNA
Experiment NMR
Number of Models  5


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   2L7D     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  RNA    A 12 380 0
2  RNA    B 12 380 0
total       24 760 0

Nucleic acids
Unit 1 DC1 DG2 DC3 G4 DA5 DA6 DT7 DT8 DC9 DG10 DC11 DG12
Unit 2 DC13 DG14 DC15 G16 DA17 DA18 DT19 DT20 DC21 DG22 DC23 DG24

Chirality of ribose and phosphate atoms

Check the naming of phosphate and ribose substituents. Recommended for phosphate oxygens and for ribose hydrogens in NMR structures.


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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany