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Sequence, Chains, Asymmetric and Biological Units

Title INHIBITOR INDUCED STRUCTURAL CHANGE IN THE HCV IRES DOMAIN I
Keywords HEPATITIS C VIRUS, RNA STRUCTURE, ANTIVIRAL, RNA
Experiment NMR
Number of Models  10


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   2KU0     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  RNA    A 38 1210 0
2  Ligand   HCV IRES DOMAIN IIA RNA  A 1 0 53
total       39 1210 53

Nucleic acids
Unit 1 G1 G2 A3 G4 G5 A6 A7 C8 U9 A10 C11 U12 G13 U14 C15 U16 U17 C18 C19 U20 U21 C22 G23 G24 G25 U26 C27 G28 U29 G30 C31 A32 G33 C34 C35 U36 C37 C38

Ligands
Unit 2 ISI39

Chirality of ribose and phosphate atoms

Check the naming of phosphate and ribose substituents. Recommended for phosphate oxygens and for ribose hydrogens in NMR structures.


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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany