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Title | INTERDOMAIN RRM PACKING CONTRIBUTES TO RNA RECOGNITION IN TH HRP1, ANCHOR RNA 3' PROCESSING TERNARY COMPLEX | |
Keywords | 3' PROCESSING, RRM DOMAIN, RNA15P, HRP1P, ENHANCER ELEMENT, POSITIONING ELEMENT, RNA RECOGNITION, MRNA PROCESSING, NUCL BINDING, NONSENSE-MEDIATED MRNA DECAY, PHOSPHOPROTEIN, RNA PROTEIN-RNA COMPLEX | |
Experiment | NMR | |
Number of Models | 10 |
Database | ID code | Status | Coordinate files | ||
Header | Asymmetric unit | Biological unit | |||
PDB | 2KM8 | released | available | available | Quaternary Structure Server |
Unit | Type | Name | Chain ID | Residues | Atoms | Hetatoms |
---|---|---|---|---|---|---|
1 | RNA | A | 13 | 414 | 0 | |
2 | Protein | MRNA 3'-END-PROCESSING PROTEIN RNA15 | B | 84 | 1296 | 0 |
3 | Protein | NUCLEAR POLYADENYLATED RNA-BINDING PROTEIN 4 | C | 167 | 2665 | 0 |
total | 264 | 4375 | 0 |
Unit 2 | ASN22 PRO23 PRO24 SER25 ARG26 VAL27 VAL28 TYR29 LEU30 GLY31 SER32 ILE33 PRO34 TYR35 ASP36 GLN37 THR38 GLU39 GLU40 GLN41 ILE42 LEU43 ASP44 LEU45 CYS46 SER47 ASN48 VAL49 GLY50 PRO51 VAL52 ILE53 ASN54 LEU55 LYS56 MET57 MET58 PHE59 ASP60 PRO61 GLN62 THR63 GLY64 ARG65 SER66 LYS67 GLY68 TYR69 ALA70 PHE71 ILE72 GLU73 PHE74 ARG75 ASP76 LEU77 GLU78 SER79 SER80 ALA81 SER82 ALA83 VAL84 ARG85 ASN86 LEU87 ASN88 GLY89 TYR90 GLN91 LEU92 GLY93 SER94 ARG95 PHE96 LEU97 LYS98 CYS99 GLY100 TYR101 SER102 SER103 ASN104 SER105 |
Unit 3 | LYS156 GLU157 SER158 CYS159 LYS160 MET161 PHE162 ILE163 GLY164 GLY165 LEU166 ASN167 TRP168 ASP169 THR170 THR171 GLU172 ASP173 ASN174 LEU175 ARG176 GLU177 TYR178 PHE179 GLY180 LYS181 TYR182 GLY183 THR184 VAL185 THR186 ASP187 LEU188 LYS189 ILE190 MET191 LYS192 ASP193 PRO194 ALA195 THR196 GLY197 ARG198 SER199 ARG200 GLY201 PHE202 GLY203 PHE204 LEU205 SER206 PHE207 GLU208 LYS209 PRO210 SER211 SER212 VAL213 ASP214 GLU215 VAL216 VAL217 LYS218 THR219 GLN220 HIS221 ILE222 LEU223 ASP224 GLY225 LYS226 VAL227 ILE228 ASP229 PRO230 LYS231 ARG232 ALA233 ILE234 PRO235 ARG236 ASP237 GLU238 GLN239 ASP240 LYS241 THR242 GLY243 LYS244 ILE245 PHE246 VAL247 GLY248 GLY249 ILE250 GLY251 PRO252 ASP253 VAL254 ARG255 PRO256 LYS257 GLU258 PHE259 GLU260 GLU261 PHE262 PHE263 SER264 GLN265 TRP266 GLY267 THR268 ILE269 ILE270 ASP271 ALA272 GLN273 LEU274 MET275 LEU276 ASP277 LYS278 ASP279 THR280 GLY281 GLN282 SER283 ARG284 GLY285 PHE286 GLY287 PHE288 VAL289 THR290 TYR291 ASP292 SER293 ALA294 ASP295 ALA296 VAL297 ASP298 ARG299 VAL300 CYS301 GLN302 ASN303 LYS304 PHE305 ILE306 ASP307 PHE308 LYS309 ASP310 ARG311 LYS312 ILE313 GLU314 ILE315 LYS316 ARG317 ALA318 GLU319 PRO320 ARG321 HIS322 |
Unit 1 | U1 A2 U3 A4 U5 A6 U7 A8 A9 U10 A11 A12 U13 |
Check the naming of phosphate and ribose substituents. Recommended for phosphate oxygens and for ribose hydrogens in NMR structures.
Perl script: | PDBscan.pl (15 Sep 2016) |
Author: | Peter Slickers (slickers@leibniz-fli.de), IMB Jena, Germany |