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Sequence, Chains, Asymmetric and Biological Units

Title AN I-MOTIF STRUCTURE WITH INTERCALATED T T PAIRS
Keywords DNA
Experiment NMR
Number of Models  10


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   2KKK     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  DNA    A 9 247 31
2  DNA    B 9 247 31
3  DNA    C 9 247 31
4  DNA    D 9 247 31
total       36 988 124

Nucleic acids
Unit 1 MCY1 DC2 DT3 DC4 DT5 DC6 DT7 DC8 DC9
Unit 2 MCY1 DC2 DT3 DC4 DT5 DC6 DT7 DC8 DC9
Unit 3 MCY1 DC2 DT3 DC4 DT5 DC6 DT7 DC8 DC9
Unit 4 MCY1 DC2 DT3 DC4 DT5 DC6 DT7 DC8 DC9

Chirality of ribose and phosphate atoms

Check the naming of phosphate and ribose substituents. Recommended for phosphate oxygens and for ribose hydrogens in NMR structures.


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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany