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Title | DATA-DRIVEN MODEL OF MED1:DNA COMPLEX | |
Keywords | ZINC FINGER, GATA-TYPE, DNA, TRANSCRIPTION FACTOR, METAL- BINDING, ZINC, ZINC-FINGER, TRANSCRIPTION/DNA COMPLEX | |
Experiment | NMR | |
Number of Models | 10 |
Database | ID code | Status | Coordinate files | ||
Header | Asymmetric unit | Biological unit | |||
PDB | 2KAE | released | available | available | Quaternary Structure Server |
Unit | Type | Name | Chain ID | Residues | Atoms | Hetatoms |
---|---|---|---|---|---|---|
1 | Protein | GATA-TYPE TRANSCRIPTION FACTOR | A | 56 | 950 | 0 |
2 | Other macromolecule | 5'- D(*DCP*DGP*DGP*DAP*DAP*DAP*DAP*DGP*DTP*DAP*DTP*DAP*DCP*DTP* DTP*DTP*DTP*DCP*DCP*DG)-3' | C | 20 | 635 | 0 |
3 | Other macromolecule | 5'- D(*DCP*DGP*DGP*DAP*DAP*DAP*DAP*DGP*DTP*DAP*DTP*DAP*DCP*DTP* DTP*DTP*DTP*DCP*DCP*DG)-3' | B | 20 | 635 | 0 |
4 | Ligand | GATA-TYPE TRANSCRIPTION FACTOR | A | 1 | 0 | 1 |
total | 97 | 2220 | 1 |
Unit 1 | SER111 PHE112 GLN113 CYS114 SER115 ASN116 CYS117 SER118 VAL119 THR120 GLU121 THR122 ILE123 ARG124 TRP125 ARG126 ASN127 ILE128 ARG129 SER130 LYS131 GLU132 GLY133 ILE134 GLN135 CYS136 ASN137 ALA138 CYS139 PHE140 ILE141 TYR142 GLN143 ARG144 LYS145 TYR146 ASN147 LYS148 THR149 ARG150 PRO151 VAL152 THR153 ALA154 VAL155 ASN156 LYS157 TYR158 GLN159 LYS160 ARG161 LYS162 LEU163 LYS164 VAL165 GLN166 |
Unit 2 | DC21 DG22 DG23 DA24 DA25 DA26 DA27 DG28 DT29 DA30 DT31 DA32 DC33 DT34 DT35 DT36 DT37 DC38 DC39 DG40 |
Unit 3 | DC1 DG2 DG3 DA4 DA5 DA6 DA7 DG8 DT9 DA10 DT11 DA12 DC13 DT14 DT15 DT16 DT17 DC18 DC19 DG20 |
Unit 4 | ZN175 |
Perl script: | PDBscan.pl (15 Sep 2016) |
Author: | Peter Slickers (slickers@leibniz-fli.de), IMB Jena, Germany |