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Sequence, Chains, Asymmetric and Biological Units

Title TETRALOOP-RECEPTOR RNA COMPLEX
Keywords RNA STRUCTURE, RNA:RNA COMPLEX, TETRALOOP-RECEPTOR, GAAA- TETRALOOP, RNA GLOBAL STRUCTURE, COMPLEX INTERFACE, RNA/RNA COMPLEX
Experiment NMR
Number of Models  10


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   2JYF     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  RNA    A 43 1382 0
2  RNA    B 43 1382 0
total       86 2764 0

Nucleic acids
Unit 1 G1 G2 G3 A4 U5 A6 U7 G8 G9 A10 A11 G12 A13 A14 C15 C16 G17 G18 G19 G20 A21 A22 A23 C24 U25 U26 G27 G28 U29 U30 C31 U32 U33 C34 C35 U36 A37 A38 G39 U40 C41 C42 U43
Unit 2 G44 G45 G46 A47 U48 A49 U50 G51 G52 A53 A54 G55 A56 A57 C58 C59 G60 G61 G62 G63 A64 A65 A66 C67 U68 U69 G70 G71 U72 U73 C74 U75 U76 C77 C78 U79 A80 A81 G82 U83 C84 C85 U86

Chirality of ribose and phosphate atoms

Check the naming of phosphate and ribose substituents. Recommended for phosphate oxygens and for ribose hydrogens in NMR structures.


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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany