|
[Image Library Home] | [Image Library Entry] |
| Title | STRUCTURE OF HUMAN SHORT-BRANCHED CHAIN ACYL-COA DEHYDROGENA (ACADSB) | |
| Keywords | MITOCHONDRION, OXIDOREDUCTASE, TRANSIT PEPTIDE, FATTY ACID METABOLISM, FAD, FLAVOPROTEIN, DISEASE MUTATION, LIPID META | |
| Experiment | X-ray diffraction | |
| Number of Models | 1 |
| Database | ID code | Status | Coordinate files | ||
| Header | Asymmetric unit | Biological unit | |||
| PDB | 2JIF | released | available | available | Quaternary Structure Server |
| Unit | Type | Name | Chain ID | Residues | Atoms | Hetatoms |
|---|---|---|---|---|---|---|
| 1 | Protein | A | 381 | 2912 | 0 | |
| 2 | Protein | B | 377 | 2882 | 0 | |
| 3 | Protein | C | 377 | 2898 | 0 | |
| 4 | Protein | D | 381 | 2928 | 0 | |
| 5 | Ligand | A | 5 | 0 | 108 | |
| 6 | Ligand | B | 6 | 0 | 109 | |
| 7 | Ligand | C | 5 | 0 | 108 | |
| 8 | Ligand | D | 9 | 0 | 121 | |
| 9 | Water | 913 | 0 | 913 | ||
| total | 2454 | 11620 | 1359 |
| Unit 1 | ALA52 PRO53 LEU54 GLN55 THR56 PHE57 THR58 ASP59 GLU60 GLU61 MET62 MET63 ILE64 LYS65 SER66 SER67 VAL68 LYS69 LYS70 PHE71 ALA72 GLN73 GLU74 GLN75 ILE76 ALA77 PRO78 LEU79 VAL80 SER81 THR82 MET83 ASP84 GLU85 ASN86 SER87 LYS88 MET89 GLU90 LYS91 SER92 VAL93 ILE94 GLN95 GLY96 LEU97 PHE98 GLN99 GLN100 GLY101 LEU102 MET103 GLY104 ILE105 GLU106 VAL107 ASP108 PRO109 GLU110 TYR111 GLY112 GLY113 THR114 GLY115 ALA116 SER117 PHE118 LEU119 SER120 THR121 VAL122 LEU123 VAL124 ILE125 GLU126 GLU127 LEU128 ALA129 LYS130 VAL131 ASP132 ALA133 SER134 VAL135 ALA136 VAL137 PHE138 CYS139 GLU140 ILE141 GLN142 ASN143 THR144 LEU145 ILE146 ASN147 THR148 LEU149 ILE150 ARG151 LYS152 HIS153 GLY154 THR155 GLU156 GLU157 GLN158 LYS159 ALA160 THR161 TYR162 LEU163 PRO164 GLN165 LEU166 THR167 THR168 GLU169 LYS170 VAL171 GLY172 SER173 PHE174 CYS175 LEU176 SER177 GLU178 ALA179 GLY180 ALA181 GLY182 SER183 ASP184 SER185 PHE186 ALA187 LEU188 LYS189 THR190 ARG191 ALA192 ASP193 LYS194 GLU195 GLY196 ASP197 TYR198 TYR199 VAL200 LEU201 ASN202 GLY203 SER204 LYS205 MET206 TRP207 ILE208 SER209 SER210 ALA211 GLU212 HIS213 ALA214 GLY215 LEU216 PHE217 LEU218 VAL219 MET220 ALA221 ASN222 VAL223 ASP224 PRO225 THR226 ILE227 GLY228 TYR229 LYS230 GLY231 ILE232 THR233 SER234 PHE235 LEU236 VAL237 ASP238 ARG239 ASP240 THR241 PRO242 GLY243 LEU244 HIS245 ILE246 GLY247 LYS248 PRO249 GLU250 ASN251 LYS252 LEU253 GLY254 LEU255 ARG256 ALA257 SER258 SER259 THR260 CYS261 PRO262 LEU263 THR264 PHE265 GLU266 ASN267 VAL268 LYS269 VAL270 PRO271 GLU272 ALA273 ASN274 ILE275 LEU276 GLY277 GLN278 ILE279 GLY280 HIS281 GLY282 TYR283 LYS284 TYR285 ALA286 ILE287 GLY288 SER289 LEU290 ASN291 GLU292 GLY293 ARG294 ILE295 GLY296 ILE297 ALA298 ALA299 GLN300 MET301 LEU302 GLY303 LEU304 ALA305 GLN306 GLY307 CYS308 PHE309 ASP310 TYR311 THR312 ILE313 PRO314 TYR315 ILE316 LYS317 GLU318 ARG319 ILE320 GLN321 PHE322 GLY323 LYS324 ARG325 LEU326 PHE327 ASP328 PHE329 GLN330 GLY331 LEU332 GLN333 HIS334 GLN335 VAL336 ALA337 HIS338 VAL339 ALA340 THR341 GLN342 LEU343 GLU344 ALA345 ALA346 ARG347 LEU348 LEU349 THR350 TYR351 ASN352 ALA353 ALA354 ARG355 LEU356 LEU357 GLU358 ALA359 GLY360 LYS361 PRO362 PHE363 ILE364 LYS365 GLU366 ALA367 SER368 MET369 ALA370 LYS371 TYR372 TYR373 ALA374 SER375 GLU376 ILE377 ALA378 GLY379 GLN380 THR381 THR382 SER383 LYS384 CYS385 ILE386 GLU387 TRP388 MET389 GLY390 GLY391 VAL392 GLY393 TYR394 THR395 LYS396 ASP397 TYR398 PRO399 VAL400 GLU401 LYS402 TYR403 PHE404 ARG405 ASP406 ALA407 LYS408 ILE409 GLY410 THR411 ILE412 TYR413 GLU414 GLY415 ALA416 SER417 ASN418 ILE419 GLN420 LEU421 ASN422 THR423 ILE424 ALA425 LYS426 HIS427 ILE428 ASP429 ALA430 GLU431 TYR432 |
| Unit 2 | THR56 PHE57 THR58 ASP59 GLU60 GLU61 MET62 MET63 ILE64 LYS65 SER66 SER67 VAL68 LYS69 LYS70 PHE71 ALA72 GLN73 GLU74 GLN75 ILE76 ALA77 PRO78 LEU79 VAL80 SER81 THR82 MET83 ASP84 GLU85 ASN86 SER87 LYS88 MET89 GLU90 LYS91 SER92 VAL93 ILE94 GLN95 GLY96 LEU97 PHE98 GLN99 GLN100 GLY101 LEU102 MET103 GLY104 ILE105 GLU106 VAL107 ASP108 PRO109 GLU110 TYR111 GLY112 GLY113 THR114 GLY115 ALA116 SER117 PHE118 LEU119 SER120 THR121 VAL122 LEU123 VAL124 ILE125 GLU126 GLU127 LEU128 ALA129 LYS130 VAL131 ASP132 ALA133 SER134 VAL135 ALA136 VAL137 PHE138 CYS139 GLU140 ILE141 GLN142 ASN143 THR144 LEU145 ILE146 ASN147 THR148 LEU149 ILE150 ARG151 LYS152 HIS153 GLY154 THR155 GLU156 GLU157 GLN158 LYS159 ALA160 THR161 TYR162 LEU163 PRO164 GLN165 LEU166 THR167 THR168 GLU169 LYS170 VAL171 GLY172 SER173 PHE174 CYS175 LEU176 SER177 GLU178 ALA179 GLY180 ALA181 GLY182 SER183 ASP184 SER185 PHE186 ALA187 LEU188 LYS189 THR190 ARG191 ALA192 ASP193 LYS194 GLU195 GLY196 ASP197 TYR198 TYR199 VAL200 LEU201 ASN202 GLY203 SER204 LYS205 MET206 TRP207 ILE208 SER209 SER210 ALA211 GLU212 HIS213 ALA214 GLY215 LEU216 PHE217 LEU218 VAL219 MET220 ALA221 ASN222 VAL223 ASP224 PRO225 THR226 ILE227 GLY228 TYR229 LYS230 GLY231 ILE232 THR233 SER234 PHE235 LEU236 VAL237 ASP238 ARG239 ASP240 THR241 PRO242 GLY243 LEU244 HIS245 ILE246 GLY247 LYS248 PRO249 GLU250 ASN251 LYS252 LEU253 GLY254 LEU255 ARG256 ALA257 SER258 SER259 THR260 CYS261 PRO262 LEU263 THR264 PHE265 GLU266 ASN267 VAL268 LYS269 VAL270 PRO271 GLU272 ALA273 ASN274 ILE275 LEU276 GLY277 GLN278 ILE279 GLY280 HIS281 GLY282 TYR283 LYS284 TYR285 ALA286 ILE287 GLY288 SER289 LEU290 ASN291 GLU292 GLY293 ARG294 ILE295 GLY296 ILE297 ALA298 ALA299 GLN300 MET301 LEU302 GLY303 LEU304 ALA305 GLN306 GLY307 CYS308 PHE309 ASP310 TYR311 THR312 ILE313 PRO314 TYR315 ILE316 LYS317 GLU318 ARG319 ILE320 GLN321 PHE322 GLY323 LYS324 ARG325 LEU326 PHE327 ASP328 PHE329 GLN330 GLY331 LEU332 GLN333 HIS334 GLN335 VAL336 ALA337 HIS338 VAL339 ALA340 THR341 GLN342 LEU343 GLU344 ALA345 ALA346 ARG347 LEU348 LEU349 THR350 TYR351 ASN352 ALA353 ALA354 ARG355 LEU356 LEU357 GLU358 ALA359 GLY360 LYS361 PRO362 PHE363 ILE364 LYS365 GLU366 ALA367 SER368 MET369 ALA370 LYS371 TYR372 TYR373 ALA374 SER375 GLU376 ILE377 ALA378 GLY379 GLN380 THR381 THR382 SER383 LYS384 CYS385 ILE386 GLU387 TRP388 MET389 GLY390 GLY391 VAL392 GLY393 TYR394 THR395 LYS396 ASP397 TYR398 PRO399 VAL400 GLU401 LYS402 TYR403 PHE404 ARG405 ASP406 ALA407 LYS408 ILE409 GLY410 THR411 ILE412 TYR413 GLU414 GLY415 ALA416 SER417 ASN418 ILE419 GLN420 LEU421 ASN422 THR423 ILE424 ALA425 LYS426 HIS427 ILE428 ASP429 ALA430 GLU431 TYR432 |
| Unit 3 | THR56 PHE57 THR58 ASP59 GLU60 GLU61 MET62 MET63 ILE64 LYS65 SER66 SER67 VAL68 LYS69 LYS70 PHE71 ALA72 GLN73 GLU74 GLN75 ILE76 ALA77 PRO78 LEU79 VAL80 SER81 THR82 MET83 ASP84 GLU85 ASN86 SER87 LYS88 MET89 GLU90 LYS91 SER92 VAL93 ILE94 GLN95 GLY96 LEU97 PHE98 GLN99 GLN100 GLY101 LEU102 MET103 GLY104 ILE105 GLU106 VAL107 ASP108 PRO109 GLU110 TYR111 GLY112 GLY113 THR114 GLY115 ALA116 SER117 PHE118 LEU119 SER120 THR121 VAL122 LEU123 VAL124 ILE125 GLU126 GLU127 LEU128 ALA129 LYS130 VAL131 ASP132 ALA133 SER134 VAL135 ALA136 VAL137 PHE138 CYS139 GLU140 ILE141 GLN142 ASN143 THR144 LEU145 ILE146 ASN147 THR148 LEU149 ILE150 ARG151 LYS152 HIS153 GLY154 THR155 GLU156 GLU157 GLN158 LYS159 ALA160 THR161 TYR162 LEU163 PRO164 GLN165 LEU166 THR167 THR168 GLU169 LYS170 VAL171 GLY172 SER173 PHE174 CYS175 LEU176 SER177 GLU178 ALA179 GLY180 ALA181 GLY182 SER183 ASP184 SER185 PHE186 ALA187 LEU188 LYS189 THR190 ARG191 ALA192 ASP193 LYS194 GLU195 GLY196 ASP197 TYR198 TYR199 VAL200 LEU201 ASN202 GLY203 SER204 LYS205 MET206 TRP207 ILE208 SER209 SER210 ALA211 GLU212 HIS213 ALA214 GLY215 LEU216 PHE217 LEU218 VAL219 MET220 ALA221 ASN222 VAL223 ASP224 PRO225 THR226 ILE227 GLY228 TYR229 LYS230 GLY231 ILE232 THR233 SER234 PHE235 LEU236 VAL237 ASP238 ARG239 ASP240 THR241 PRO242 GLY243 LEU244 HIS245 ILE246 GLY247 LYS248 PRO249 GLU250 ASN251 LYS252 LEU253 GLY254 LEU255 ARG256 ALA257 SER258 SER259 THR260 CYS261 PRO262 LEU263 THR264 PHE265 GLU266 ASN267 VAL268 LYS269 VAL270 PRO271 GLU272 ALA273 ASN274 ILE275 LEU276 GLY277 GLN278 ILE279 GLY280 HIS281 GLY282 TYR283 LYS284 TYR285 ALA286 ILE287 GLY288 SER289 LEU290 ASN291 GLU292 GLY293 ARG294 ILE295 GLY296 ILE297 ALA298 ALA299 GLN300 MET301 LEU302 GLY303 LEU304 ALA305 GLN306 GLY307 CYS308 PHE309 ASP310 TYR311 THR312 ILE313 PRO314 TYR315 ILE316 LYS317 GLU318 ARG319 ILE320 GLN321 PHE322 GLY323 LYS324 ARG325 LEU326 PHE327 ASP328 PHE329 GLN330 GLY331 LEU332 GLN333 HIS334 GLN335 VAL336 ALA337 HIS338 VAL339 ALA340 THR341 GLN342 LEU343 GLU344 ALA345 ALA346 ARG347 LEU348 LEU349 THR350 TYR351 ASN352 ALA353 ALA354 ARG355 LEU356 LEU357 GLU358 ALA359 GLY360 LYS361 PRO362 PHE363 ILE364 LYS365 GLU366 ALA367 SER368 MET369 ALA370 LYS371 TYR372 TYR373 ALA374 SER375 GLU376 ILE377 ALA378 GLY379 GLN380 THR381 THR382 SER383 LYS384 CYS385 ILE386 GLU387 TRP388 MET389 GLY390 GLY391 VAL392 GLY393 TYR394 THR395 LYS396 ASP397 TYR398 PRO399 VAL400 GLU401 LYS402 TYR403 PHE404 ARG405 ASP406 ALA407 LYS408 ILE409 GLY410 THR411 ILE412 TYR413 GLU414 GLY415 ALA416 SER417 ASN418 ILE419 GLN420 LEU421 ASN422 THR423 ILE424 ALA425 LYS426 HIS427 ILE428 ASP429 ALA430 GLU431 TYR432 |
| Unit 4 | ALA52 PRO53 LEU54 GLN55 THR56 PHE57 THR58 ASP59 GLU60 GLU61 MET62 MET63 ILE64 LYS65 SER66 SER67 VAL68 LYS69 LYS70 PHE71 ALA72 GLN73 GLU74 GLN75 ILE76 ALA77 PRO78 LEU79 VAL80 SER81 THR82 MET83 ASP84 GLU85 ASN86 SER87 LYS88 MET89 GLU90 LYS91 SER92 VAL93 ILE94 GLN95 GLY96 LEU97 PHE98 GLN99 GLN100 GLY101 LEU102 MET103 GLY104 ILE105 GLU106 VAL107 ASP108 PRO109 GLU110 TYR111 GLY112 GLY113 THR114 GLY115 ALA116 SER117 PHE118 LEU119 SER120 THR121 VAL122 LEU123 VAL124 ILE125 GLU126 GLU127 LEU128 ALA129 LYS130 VAL131 ASP132 ALA133 SER134 VAL135 ALA136 VAL137 PHE138 CYS139 GLU140 ILE141 GLN142 ASN143 THR144 LEU145 ILE146 ASN147 THR148 LEU149 ILE150 ARG151 LYS152 HIS153 GLY154 THR155 GLU156 GLU157 GLN158 LYS159 ALA160 THR161 TYR162 LEU163 PRO164 GLN165 LEU166 THR167 THR168 GLU169 LYS170 VAL171 GLY172 SER173 PHE174 CYS175 LEU176 SER177 GLU178 ALA179 GLY180 ALA181 GLY182 SER183 ASP184 SER185 PHE186 ALA187 LEU188 LYS189 THR190 ARG191 ALA192 ASP193 LYS194 GLU195 GLY196 ASP197 TYR198 TYR199 VAL200 LEU201 ASN202 GLY203 SER204 LYS205 MET206 TRP207 ILE208 SER209 SER210 ALA211 GLU212 HIS213 ALA214 GLY215 LEU216 PHE217 LEU218 VAL219 MET220 ALA221 ASN222 VAL223 ASP224 PRO225 THR226 ILE227 GLY228 TYR229 LYS230 GLY231 ILE232 THR233 SER234 PHE235 LEU236 VAL237 ASP238 ARG239 ASP240 THR241 PRO242 GLY243 LEU244 HIS245 ILE246 GLY247 LYS248 PRO249 GLU250 ASN251 LYS252 LEU253 GLY254 LEU255 ARG256 ALA257 SER258 SER259 THR260 CYS261 PRO262 LEU263 THR264 PHE265 GLU266 ASN267 VAL268 LYS269 VAL270 PRO271 GLU272 ALA273 ASN274 ILE275 LEU276 GLY277 GLN278 ILE279 GLY280 HIS281 GLY282 TYR283 LYS284 TYR285 ALA286 ILE287 GLY288 SER289 LEU290 ASN291 GLU292 GLY293 ARG294 ILE295 GLY296 ILE297 ALA298 ALA299 GLN300 MET301 LEU302 GLY303 LEU304 ALA305 GLN306 GLY307 CYS308 PHE309 ASP310 TYR311 THR312 ILE313 PRO314 TYR315 ILE316 LYS317 GLU318 ARG319 ILE320 GLN321 PHE322 GLY323 LYS324 ARG325 LEU326 PHE327 ASP328 PHE329 GLN330 GLY331 LEU332 GLN333 HIS334 GLN335 VAL336 ALA337 HIS338 VAL339 ALA340 THR341 GLN342 LEU343 GLU344 ALA345 ALA346 ARG347 LEU348 LEU349 THR350 TYR351 ASN352 ALA353 ALA354 ARG355 LEU356 LEU357 GLU358 ALA359 GLY360 LYS361 PRO362 PHE363 ILE364 LYS365 GLU366 ALA367 SER368 MET369 ALA370 LYS371 TYR372 TYR373 ALA374 SER375 GLU376 ILE377 ALA378 GLY379 GLN380 THR381 THR382 SER383 LYS384 CYS385 ILE386 GLU387 TRP388 MET389 GLY390 GLY391 VAL392 GLY393 TYR394 THR395 LYS396 ASP397 TYR398 PRO399 VAL400 GLU401 LYS402 TYR403 PHE404 ARG405 ASP406 ALA407 LYS408 ILE409 GLY410 THR411 ILE412 TYR413 GLU414 GLY415 ALA416 SER417 ASN418 ILE419 GLN420 LEU421 ASN422 THR423 ILE424 ALA425 LYS426 HIS427 ILE428 ASP429 ALA430 GLU431 TYR432 |
| Unit 5 | FAD1433 COS1434 EDO1435 CL1436 CL1437 |
| Unit 6 | FAD1433 COS1434 EDO1435 CL1436 CL1437 CL1438 |
| Unit 7 | FAD1433 COS1434 EDO1435 CL1436 CL1437 |
| Unit 8 | FAD1433 COS1434 EDO1435 EDO1436 EDO1437 EDO1438 CL1439 CL1440 CL1441 |
| Perl script: | PDBscan.pl (15 Sep 2016) |
| Author: | Peter Slickers (slickers@leibniz-fli.de), IMB Jena, Germany |