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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF HELICOBACTER PYLORI GLUTAMATE RACEMASE IN COMPLEX WITH D-GLUTAMATE
Keywords CELL WALL, ISOMERASE, CELL SHAPE, GLUTAMATE RACEMASE, PEPTIDOGLYCAN SYNTHESIS, PEPTIDOGLYCAN BIOSYNTHESIS
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   2JFX     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   GLUTAMATE RACEMASE  A 250 1970 0
2  Protein   GLUTAMATE RACEMASE  B 248 1951 0
3  Ligand   GLUTAMATE RACEMASE  A 1 0 10
4  Ligand   GLUTAMATE RACEMASE  B 1 0 10
5 Water     108 0 108
total       608 3921 128

Proteins
Unit 1 MET1 LYS2 ILE3 GLY4 VAL5 PHE6 ASP7 SER8 GLY9 VAL10 GLY11 GLY12 PHE13 SER14 VAL15 LEU16 LYS17 SER18 LEU19 LEU20 LYS21 ALA22 ARG23 LEU24 PHE25 ASP26 GLU27 ILE28 ILE29 TYR30 TYR31 GLY32 ASP33 SER34 ALA35 ARG36 VAL37 PRO38 TYR39 GLY40 THR41 LYS42 ASP43 PRO44 THR45 THR46 ILE47 LYS48 GLN49 PHE50 GLY51 LEU52 GLU53 ALA54 LEU55 ASP56 PHE57 PHE58 LYS59 PRO60 HIS61 GLU62 ILE63 GLU64 LEU65 LEU66 ILE67 VAL68 ALA69 CYS70 ASN71 THR72 ALA73 SER74 ALA75 LEU76 ALA77 LEU78 GLU79 GLU80 MET81 GLN82 LYS83 TYR84 SER85 LYS86 ILE87 PRO88 ILE89 VAL90 GLY91 VAL92 ILE93 GLU94 PRO95 SER96 ILE97 LEU98 ALA99 ILE100 LYS101 ARG102 GLN103 VAL104 GLU105 ASP106 LYS107 ASN108 ALA109 PRO110 ILE111 LEU112 VAL113 LEU114 GLY115 THR116 LYS117 ALA118 THR119 ILE120 GLN121 SER122 ASN123 ALA124 TYR125 ASP126 ASN127 ALA128 LEU129 LYS130 GLN131 GLN132 GLY133 TYR134 LEU135 ASN136 ILE137 SER138 HIS139 LEU140 ALA141 THR142 SER143 LEU144 PHE145 VAL146 PRO147 LEU148 ILE149 GLU150 GLU151 SER152 ILE153 LEU154 GLU155 GLY156 GLU157 LEU158 LEU159 GLU160 THR161 CYS162 MET163 HIS164 TYR165 TYR166 PHE167 THR168 PRO169 LEU170 GLU171 ILE172 LEU173 PRO174 GLU175 VAL176 ILE177 ILE178 LEU179 GLY180 CYS181 THR182 HIS183 PHE184 PRO185 LEU186 ILE187 ALA188 GLN189 LYS190 ILE191 GLU192 GLY193 TYR194 PHE195 MET196 GLY197 HIS198 PHE199 ALA200 LEU201 PRO202 THR203 PRO204 PRO205 LEU206 LEU207 ILE208 HIS209 SER210 GLY211 ASP212 ALA213 ILE214 VAL215 GLU216 TYR217 LEU218 GLN219 GLN220 LYS221 TYR222 ALA223 LEU224 LYS225 PHE231 PRO232 LYS233 VAL234 GLU235 PHE236 HIS237 ALA238 SER239 GLY240 ASP241 VAL242 ILE243 TRP244 LEU245 GLU246 ARG247 GLN248 ALA249 LYS250 GLU251 TRP252 LEU253 LYS254 LEU255
Unit 2 MET1 LYS2 ILE3 GLY4 VAL5 PHE6 ASP7 SER8 GLY9 VAL10 GLY11 GLY12 PHE13 SER14 VAL15 LEU16 LYS17 SER18 LEU19 LEU20 LYS21 ALA22 ARG23 LEU24 PHE25 ASP26 GLU27 ILE28 ILE29 TYR30 TYR31 GLY32 ASP33 SER34 ALA35 ARG36 VAL37 PRO38 TYR39 GLY40 THR41 LYS42 ASP43 PRO44 THR45 THR46 ILE47 LYS48 GLN49 PHE50 GLY51 LEU52 GLU53 ALA54 LEU55 ASP56 PHE57 PHE58 LYS59 PRO60 HIS61 GLU62 ILE63 GLU64 LEU65 LEU66 ILE67 VAL68 ALA69 CYS70 ASN71 THR72 ALA73 SER74 ALA75 LEU76 ALA77 LEU78 GLU79 GLU80 MET81 GLN82 LYS83 TYR84 SER85 LYS86 ILE87 PRO88 ILE89 VAL90 GLY91 VAL92 ILE93 GLU94 PRO95 SER96 ILE97 LEU98 ALA99 ILE100 LYS101 ARG102 GLN103 VAL104 GLU105 ASP106 LYS107 ASN108 ALA109 PRO110 ILE111 LEU112 VAL113 LEU114 GLY115 THR116 LYS117 ALA118 THR119 ILE120 GLN121 SER122 ASN123 ALA124 TYR125 ASP126 ASN127 ALA128 LEU129 LYS130 GLN131 GLN132 GLY133 TYR134 LEU135 ASN136 ILE137 SER138 HIS139 LEU140 ALA141 THR142 SER143 LEU144 PHE145 VAL146 PRO147 LEU148 ILE149 GLU150 GLU151 SER152 ILE153 LEU154 GLU155 GLY156 GLU157 LEU158 LEU159 GLU160 THR161 CYS162 MET163 HIS164 TYR165 TYR166 PHE167 THR168 PRO169 LEU170 GLU171 ILE172 LEU173 PRO174 GLU175 VAL176 ILE177 ILE178 LEU179 GLY180 CYS181 THR182 HIS183 PHE184 PRO185 LEU186 ILE187 ALA188 GLN189 LYS190 ILE191 GLU192 GLY193 TYR194 PHE195 MET196 GLY197 HIS198 PHE199 ALA200 LEU201 PRO202 THR203 PRO204 PRO205 LEU206 LEU207 ILE208 HIS209 SER210 GLY211 ASP212 ALA213 ILE214 VAL215 GLU216 TYR217 LEU218 GLN219 GLN220 LYS221 TYR222 ALA223 LEU224 PRO232 LYS233 VAL234 GLU235 PHE236 HIS237 ALA238 SER239 GLY240 ASP241 VAL242 ILE243 TRP244 LEU245 GLU246 ARG247 GLN248 ALA249 LYS250 GLU251 TRP252 LEU253 LYS254 LEU255

Ligands
Unit 3 DGL1256
Unit 4 DGL1256

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany