2JE6 - Sequence, Chains, Asymmetric and Biological Units

• Title: STRUCTURE OF A 9-SUBUNIT ARCHAEAL EXOSOME
• Keywords: NUCLEASE, HYDROLASE, RNA-BINDING, EXONUCLEASE, PHOSPHOROLYTIC, EXORIBONUCLEASE, RNA DEGRADATION, RNA, RRP4, RRP42, RRP41, EXOSOME, ARCHAEAL, RNASE PH
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	2JE6	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	EXOSOME COMPLEX EXONUCLEASE 2	A	274	2073	0
2	Protein	EXOSOME COMPLEX EXONUCLEASE 1	B	234	1776	0
3	Protein	EXOSOME COMPLEX RNA-BINDING PROTEIN 1	I	207	1489	0
4	Ligand	EXOSOME COMPLEX EXONUCLEASE 2	A	2	0	23
5	Ligand	EXOSOME COMPLEX EXONUCLEASE 1	B	1	0	1
6	Water			398	0	398
total				1116	5338	422

Proteins

Unit 1	GLY -1 HIS 0 MET 1 SER 2 SER 3 THR 4 PRO 5 SER 6 ASN 7 GLN 8 ASN 9 ILE 10 ILE 11 PRO 12 ILE 13 ILE 14 LYS 15 LYS 16 GLU 17 SER 18 ILE 19 VAL 20 SER 21 LEU 22 PHE 23 GLU 24 LYS 25 GLY 26 ILE 27 ARG 28 GLN 29 ASP 30 GLY 31 ARG 32 LYS 33 LEU 34 THR 35 ASP 36 TYR 37 ARG 38 PRO 39 LEU 40 SER 41 ILE 42 THR 43 LEU 44 ASP 45 TYR 46 ALA 47 LYS 48 LYS 49 ALA 50 ASP 51 GLY 52 SER 53 ALA 54 LEU 55 VAL 56 LYS 57 LEU 58 GLY 59 THR 60 THR 61 MET 62 VAL 63 LEU 64 ALA 65 GLY 66 THR 67 LYS 68 LEU 69 GLU 70 ILE 71 ASP 72 LYS 73 PRO 74 TYR 75 GLU 76 ASP 77 THR 78 PRO 79 ASN 80 GLN 81 GLY 82 ASN 83 LEU 84 ILE 85 VAL 86 ASN 87 VAL 88 GLU 89 LEU 90 LEU 91 PRO 92 LEU 93 ALA 94 TYR 95 GLU 96 THR 97 PHE 98 GLU 99 PRO 100 GLY 101 PRO 102 PRO 103 ASP 104 GLU 105 ASN 106 ALA 107 ILE 108 GLU 109 LEU 110 ALA 111 ARG 112 VAL 113 VAL 114 ASP 115 ARG 116 SER 117 LEU 118 ARG 119 ASP 120 SER 121 LYS 122 ALA 123 LEU 124 ASP 125 LEU 126 THR 127 LYS 128 LEU 129 VAL 130 ILE 131 GLU 132 PRO 133 GLY 134 LYS 135 SER 136 VAL 137 TRP 138 THR 139 VAL 140 TRP 141 LEU 142 ASP 143 VAL 144 TYR 145 VAL 146 LEU 147 ASP 148 TYR 149 GLY 150 GLY 151 ASN 152 VAL 153 LEU 154 ASP 155 ALA 156 CYS 157 THR 158 LEU 159 ALA 160 SER 161 VAL 162 ALA 163 ALA 164 LEU 165 TYR 166 ASN 167 THR 168 LYS 169 VAL 170 TYR 171 LYS 172 VAL 173 GLU 174 GLN 175 HIS 176 ILE 180 SER 181 VAL 182 ASN 183 LYS 184 ASN 185 GLU 186 VAL 187 VAL 188 GLY 189 LYS 190 LEU 191 PRO 192 LEU 193 ASN 194 TYR 195 PRO 196 VAL 197 VAL 198 THR 199 ILE 200 SER 201 VAL 202 ALA 203 LYS 204 VAL 205 ASP 206 LYS 207 TYR 208 LEU 209 VAL 210 VAL 211 ASP 212 PRO 213 ASP 214 LEU 215 ASP 216 GLU 217 GLU 218 SER 219 ILE 220 MET 221 ASP 222 ALA 223 LYS 224 ILE 225 SER 226 PHE 227 SER 228 TYR 229 THR 230 PRO 231 ASP 232 LEU 233 LYS 234 ILE 235 VAL 236 GLY 237 ILE 238 GLN 239 LYS 240 SER 241 GLY 242 LYS 243 GLY 244 SER 245 MET 246 SER 247 LEU 248 GLN 249 ASP 250 ILE 251 ASP 252 GLN 253 ALA 254 GLU 255 ASN 256 THR 257 ALA 258 ARG 259 SER 260 THR 261 ALA 262 VAL 263 LYS 264 LEU 265 LEU 266 GLU 267 GLU 268 LEU 269 LYS 270 LYS 271 HIS 272 LEU 273 GLY 274 ILE 275
Unit 2	GLU 8 ARG 9 PRO 10 LYS 11 LEU 12 ILE 13 LEU 14 ASP 15 ASP 16 GLY 17 LYS 18 ARG 19 THR 20 ASP 21 GLY 22 ARG 23 LYS 24 PRO 25 ASP 26 GLU 27 LEU 28 ARG 29 SER 30 ILE 31 LYS 32 ILE 33 GLU 34 LEU 35 GLY 36 VAL 37 LEU 38 LYS 39 ASN 40 ALA 41 ASP 42 GLY 43 SER 44 ALA 45 ILE 46 PHE 47 GLU 48 MET 49 GLY 50 ASN 51 THR 52 LYS 53 ALA 54 ILE 55 ALA 56 ALA 57 VAL 58 TYR 59 GLY 60 PRO 61 LYS 62 GLU 63 MET 64 HIS 65 PRO 66 ARG 67 HIS 68 LEU 69 SER 70 LEU 71 PRO 72 ASP 73 ARG 74 ALA 75 VAL 76 LEU 77 ARG 78 VAL 79 ARG 80 TYR 81 HIS 82 MET 83 THR 84 PRO 85 PHE 86 SER 87 THR 88 ASP 89 GLU 90 ARG 91 LYS 92 ASN 93 PRO 94 ALA 95 PRO 96 SER 97 ARG 98 ARG 99 GLU 100 ILE 101 GLU 102 LEU 103 SER 104 LYS 105 VAL 106 ILE 107 ARG 108 GLU 109 ALA 110 LEU 111 GLU 112 SER 113 ALA 114 VAL 115 LEU 116 VAL 117 GLU 118 LEU 119 PHE 120 PRO 121 ARG 122 THR 123 ALA 124 ILE 125 ASP 126 VAL 127 PHE 128 THR 129 GLU 130 ILE 131 LEU 132 GLN 133 ALA 134 ASP 135 ALA 136 GLY 137 SER 138 ARG 139 LEU 140 VAL 141 SER 142 LEU 143 MET 144 ALA 145 ALA 146 SER 147 LEU 148 ALA 149 LEU 150 ALA 151 ASP 152 ALA 153 GLY 154 ILE 155 PRO 156 MET 157 ARG 158 ASP 159 LEU 160 ILE 161 ALA 162 GLY 163 VAL 164 ALA 165 VAL 166 GLY 167 LYS 168 ALA 169 ASP 170 GLY 171 VAL 172 ILE 173 ILE 174 LEU 175 ASP 176 LEU 177 ASN 178 GLU 179 THR 180 GLU 181 ALA 182 MET 183 TRP 184 GLY 185 GLU 186 ALA 187 ASP 188 MET 189 PRO 190 ILE 191 ALA 192 MET 193 MET 194 PRO 195 SER 196 LEU 197 ASN 198 GLN 199 VAL 200 THR 201 LEU 202 PHE 203 GLN 204 LEU 205 ASN 206 GLY 207 SER 208 MET 209 THR 210 PRO 211 ASP 212 GLU 213 PHE 214 ARG 215 GLN 216 ALA 217 PHE 218 ASP 219 LEU 220 ALA 221 VAL 222 LYS 223 GLY 224 ILE 225 ASN 226 ILE 227 ILE 228 TYR 229 ASN 230 LEU 231 GLU 232 ARG 233 GLU 234 ALA 235 LEU 236 LYS 237 SER 238 LYS 239 TYR 240 VAL 241
Unit 3	GLN 7 GLU 8 ILE 9 VAL 10 LEU 11 GLN 12 PRO 13 ARG 14 SER 15 ILE 16 VAL 17 VAL 18 PRO 19 GLY 20 GLU 21 LEU 22 LEU 23 ALA 24 GLU 25 GLY 26 GLU 27 PHE 28 GLN 29 ILE 30 PRO 31 TRP 32 SER 33 PRO 34 TYR 35 ILE 36 LEU 37 LYS 38 ILE 39 ASN 40 SER 41 LYS 42 TYR 43 TYR 44 SER 45 THR 46 VAL 47 VAL 48 GLY 49 LEU 50 PHE 51 ASP 52 VAL 53 LYS 54 ASP 55 THR 56 GLN 57 PHE 58 GLU 59 VAL 60 ILE 61 PRO 62 LEU 63 GLU 64 GLY 65 SER 66 PHE 67 TYR 68 TYR 69 PRO 70 LYS 71 ILE 72 ASN 73 ASP 74 ILE 75 VAL 76 ILE 77 GLY 78 LEU 79 VAL 80 GLU 81 ASP 82 VAL 83 GLU 84 ILE 85 TYR 86 GLY 87 TRP 88 VAL 89 VAL 90 ASP 91 ILE 92 LYS 93 ALA 94 PRO 95 TYR 96 LYS 97 ALA 98 TYR 99 LEU 100 PRO 101 ALA 102 SER 103 ASN 104 LEU 105 LEU 106 GLY 107 ARG 108 SER 109 ILE 110 ASN 111 VAL 112 GLY 113 GLU 114 ASP 115 LEU 116 ARG 117 ARG 118 TYR 119 LEU 120 ASP 121 VAL 122 GLY 123 ASP 124 TYR 125 VAL 126 ILE 127 ALA 128 ARG 129 ILE 130 GLU 131 ASN 132 PHE 133 ASP 134 ARG 135 SER 136 ILE 137 ASP 138 PRO 139 VAL 140 LEU 141 SER 142 VAL 143 LYS 144 GLY 145 LYS 146 ASP 147 LEU 148 GLY 149 ARG 150 VAL 151 SER 152 ASN 153 GLY 154 ILE 155 VAL 156 ILE 157 ASP 158 ILE 159 MET 160 PRO 161 VAL 162 LYS 163 VAL 164 PRO 165 ARG 166 VAL 167 ILE 168 GLY 169 LYS 170 ASN 171 LYS 172 SER 173 MET 174 TYR 175 GLU 176 THR 177 LEU 178 THR 179 SER 180 LYS 181 SER 182 ILE 186 PHE 187 VAL 188 ALA 189 ASN 190 ASN 191 GLY 192 ARG 193 ILE 194 TRP 195 ALA 196 PHE 202 SER 203 GLU 204 GLU 205 ILE 206 LEU 207 ILE 208 GLU 209 ALA 210 ILE 211 ARG 212 LYS 213 ILE 214 GLU 215 ASN 216 GLU 217 SER 218 HIS 219 ILE 220 LYS 221

Ligands

Unit 4	1PE 1276 PEG 1277
Unit 5	CL 1242