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Title | STRUCTURAL AND MECHANISTIC BASIS OF PENICILLIN BINDING PROTEIN INHIBITION BY LACTIVICINS | |
Keywords | PEPTIDOGLYCAN SYNTHESIS MULTIFUNCTIONAL ENZYME, CELL WALL, PEPTIDOGLYCAN, GAMMA LACTAM ANTIBIOTICS, DRUG-BINDING PROTEIN | |
Experiment | X-ray diffraction | |
Number of Models | 1 |
Database | ID code | Status | Coordinate files | ||
Header | Asymmetric unit | Biological unit | |||
PDB | 2JE5 | released | available | available | Quaternary Structure Server |
Unit | Type | Name | Chain ID | Residues | Atoms | Hetatoms |
---|---|---|---|---|---|---|
1 | Protein | PENICILLIN-BINDING PROTEIN 1B | A | 461 | 3546 | 0 |
2 | Protein | PENICILLIN-BINDING PROTEIN 1B | B | 462 | 3553 | 0 |
3 | Ligand | PENICILLIN-BINDING PROTEIN 1B | A | 4 | 0 | 26 |
4 | Ligand | PENICILLIN-BINDING PROTEIN 1B | B | 4 | 0 | 26 |
5 | Water | 79 | 0 | 79 | ||
total | 1010 | 7099 | 131 |
Unit 1 | SER106 GLU107 ILE108 THR109 TYR110 SER111 ASP112 GLY113 THR114 ASP337 TYR338 LEU339 TYR340 PHE341 THR342 THR343 LEU344 ALA345 GLU346 ALA347 GLN348 GLU349 ARG350 MET351 TYR352 ASP353 TYR354 LEU355 ALA356 GLN357 ARG358 ASP359 ASN360 VAL361 SER362 ALA363 LYS364 GLU365 LEU366 LYS367 ASN368 GLU369 ALA370 THR371 GLN372 LYS373 PHE374 TYR375 ARG376 ASP377 LEU378 ALA379 ALA380 LYS381 GLU382 ILE383 GLU384 ASN385 GLY386 GLY387 TYR388 LYS389 ILE390 THR391 THR392 THR393 ILE394 ASP395 GLN396 LYS397 ILE398 HIS399 SER400 ALA401 MET402 GLN403 SER404 ALA405 VAL406 ALA407 ASP408 TYR409 GLY410 TYR411 LEU412 LEU413 ASP414 ASP415 GLY416 THR417 GLY418 ARG419 VAL420 GLU421 VAL422 GLY423 ASN424 VAL425 LEU426 MET427 ASP428 ASN429 GLN430 THR431 GLY432 ALA433 ILE434 LEU435 GLY436 PHE437 VAL438 GLY439 GLY440 ARG441 ASN442 TYR443 GLN444 GLU445 ASN446 GLN447 ASN448 ASN449 HIS450 ALA451 PHE452 ASP453 THR454 LYS455 ARG456 SER457 PRO458 ALA459 SER460 THR461 THR462 LYS463 PRO464 LEU465 LEU466 ALA467 TYR468 GLY469 ILE470 ALA471 ILE472 ASP473 GLN474 GLY475 LEU476 MET477 GLY478 SER479 GLU480 THR481 ILE482 LEU483 SER484 ASN485 TYR486 PRO487 THR488 ASN489 PHE490 ALA491 ASN492 GLY493 ASN494 PRO495 ILE496 MET497 TYR498 ALA499 ASN500 SER501 LYS502 GLY503 THR504 GLY505 MET506 MET507 THR508 LEU509 GLY510 GLU511 ALA512 LEU513 ASN514 TYR515 SER516 TRP517 ASN518 ILE519 PRO520 ALA521 TYR522 TRP523 THR524 TYR525 ARG526 MET527 LEU528 ARG529 GLU530 ASN531 GLY532 VAL533 ASP534 VAL535 LYS536 GLY537 TYR538 MET539 GLU540 LYS541 MET542 GLY543 TYR544 GLU545 ILE546 PRO547 GLU548 TYR549 GLY550 ILE551 GLU552 SER553 LEU554 PRO555 MET556 GLY557 GLY558 GLY559 ILE560 GLU561 VAL562 THR563 VAL564 ALA565 GLN566 HIS567 THR568 ASN569 GLY570 TYR571 GLN572 THR573 LEU574 ALA575 ASN576 ASN577 GLY578 VAL579 TYR580 HIS581 GLN582 LYS583 HIS584 VAL585 ILE586 SER587 LYS588 ILE589 GLU590 ALA591 ALA592 ASP593 GLY594 ARG595 VAL596 VAL597 TYR598 GLU599 TYR600 GLN601 ASP602 LYS603 PRO604 VAL605 GLN606 VAL607 TYR608 SER609 LYS610 ALA611 THR612 ALA613 THR614 ILE615 MET616 GLN617 GLY618 LEU619 LEU620 ARG621 GLU622 VAL623 LEU624 SER625 SER626 ARG627 VAL628 THR629 THR630 THR631 PHE632 LYS633 SER634 ASN635 LEU636 THR637 SER638 LEU639 ASN640 PRO641 THR642 LEU643 ALA644 ASN645 ALA646 ASP647 TRP648 ILE649 GLY650 LYS651 THR652 GLY653 THR654 THR655 ASN656 GLN657 ASP658 GLU659 ASN660 MET661 TRP662 LEU663 MET664 LEU665 SER666 THR667 PRO668 ARG669 LEU670 THR671 LEU672 GLY673 GLY674 TRP675 ILE676 GLY677 HIS678 ASP679 ASP680 ASN681 HIS682 SER683 LEU684 SER685 GLN686 GLN687 ALA688 GLY689 TYR690 SER691 ASN692 ASN693 SER694 ASN695 TYR696 MET697 ALA698 HIS699 LEU700 VAL701 ASN702 ALA703 ILE704 GLN705 GLN706 ALA707 SER708 PRO709 SER710 ILE711 TRP712 GLY713 ASN714 GLU715 ARG716 PHE717 ALA718 LEU719 ASP720 PRO721 SER722 VAL723 VAL724 LYS725 SER726 GLU727 VAL728 LEU729 LYS730 SER731 THR732 GLY733 GLN734 LYS735 PRO736 GLY737 LYS738 VAL739 SER740 VAL741 GLU742 GLY743 LYS744 GLU745 VAL746 GLU747 VAL748 THR749 GLY750 SER751 THR752 VAL753 THR754 SER755 TYR756 TRP757 ALA758 ASN759 LYS760 SER761 GLY762 ALA763 PRO764 ALA765 THR766 SER767 TYR768 ARG769 PHE770 ALA771 ILE772 GLY773 GLY774 SER775 ASP776 ALA777 ASP778 TYR779 GLN780 ASN781 ALA782 TRP783 SER784 SER785 ILE786 VAL787 GLY788 |
Unit 2 | SER106 GLU107 ILE108 THR109 TYR110 SER111 ASP112 GLY113 THR114 VAL115 ASP337 TYR338 LEU339 TYR340 PHE341 THR342 THR343 LEU344 ALA345 GLU346 ALA347 GLN348 GLU349 ARG350 MET351 TYR352 ASP353 TYR354 LEU355 ALA356 GLN357 ARG358 ASP359 ASN360 VAL361 SER362 ALA363 LYS364 GLU365 LEU366 LYS367 ASN368 GLU369 ALA370 THR371 GLN372 LYS373 PHE374 TYR375 ARG376 ASP377 LEU378 ALA379 ALA380 LYS381 GLU382 ILE383 GLU384 ASN385 GLY386 GLY387 TYR388 LYS389 ILE390 THR391 THR392 THR393 ILE394 ASP395 GLN396 LYS397 ILE398 HIS399 SER400 ALA401 MET402 GLN403 SER404 ALA405 VAL406 ALA407 ASP408 TYR409 GLY410 TYR411 LEU412 LEU413 ASP414 ASP415 GLY416 THR417 GLY418 ARG419 VAL420 GLU421 VAL422 GLY423 ASN424 VAL425 LEU426 MET427 ASP428 ASN429 GLN430 THR431 GLY432 ALA433 ILE434 LEU435 GLY436 PHE437 VAL438 GLY439 GLY440 ARG441 ASN442 TYR443 GLN444 GLU445 ASN446 GLN447 ASN448 ASN449 HIS450 ALA451 PHE452 ASP453 THR454 LYS455 ARG456 SER457 PRO458 ALA459 SER460 THR461 THR462 LYS463 PRO464 LEU465 LEU466 ALA467 TYR468 GLY469 ILE470 ALA471 ILE472 ASP473 GLN474 GLY475 LEU476 MET477 GLY478 SER479 GLU480 THR481 ILE482 LEU483 SER484 ASN485 TYR486 PRO487 THR488 ASN489 PHE490 ALA491 ASN492 GLY493 ASN494 PRO495 ILE496 MET497 TYR498 ALA499 ASN500 SER501 LYS502 GLY503 THR504 GLY505 MET506 MET507 THR508 LEU509 GLY510 GLU511 ALA512 LEU513 ASN514 TYR515 SER516 TRP517 ASN518 ILE519 PRO520 ALA521 TYR522 TRP523 THR524 TYR525 ARG526 MET527 LEU528 ARG529 GLU530 ASN531 GLY532 VAL533 ASP534 VAL535 LYS536 GLY537 TYR538 MET539 GLU540 LYS541 MET542 GLY543 TYR544 GLU545 ILE546 PRO547 GLU548 TYR549 GLY550 ILE551 GLU552 SER553 LEU554 PRO555 MET556 GLY557 GLY558 GLY559 ILE560 GLU561 VAL562 THR563 VAL564 ALA565 GLN566 HIS567 THR568 ASN569 GLY570 TYR571 GLN572 THR573 LEU574 ALA575 ASN576 ASN577 GLY578 VAL579 TYR580 HIS581 GLN582 LYS583 HIS584 VAL585 ILE586 SER587 LYS588 ILE589 GLU590 ALA591 ALA592 ASP593 GLY594 ARG595 VAL596 VAL597 TYR598 GLU599 TYR600 GLN601 ASP602 LYS603 PRO604 VAL605 GLN606 VAL607 TYR608 SER609 LYS610 ALA611 THR612 ALA613 THR614 ILE615 MET616 GLN617 GLY618 LEU619 LEU620 ARG621 GLU622 VAL623 LEU624 SER625 SER626 ARG627 VAL628 THR629 THR630 THR631 PHE632 LYS633 SER634 ASN635 LEU636 THR637 SER638 LEU639 ASN640 PRO641 THR642 LEU643 ALA644 ASN645 ALA646 ASP647 TRP648 ILE649 GLY650 LYS651 THR652 GLY653 THR654 THR655 ASN656 GLN657 ASP658 GLU659 ASN660 MET661 TRP662 LEU663 MET664 LEU665 SER666 THR667 PRO668 ARG669 LEU670 THR671 LEU672 GLY673 GLY674 TRP675 ILE676 GLY677 HIS678 ASP679 ASP680 ASN681 HIS682 SER683 LEU684 SER685 GLN686 GLN687 ALA688 GLY689 TYR690 SER691 ASN692 ASN693 SER694 ASN695 TYR696 MET697 ALA698 HIS699 LEU700 VAL701 ASN702 ALA703 ILE704 GLN705 GLN706 ALA707 SER708 PRO709 SER710 ILE711 TRP712 GLY713 ASN714 GLU715 ARG716 PHE717 ALA718 LEU719 ASP720 PRO721 SER722 VAL723 VAL724 LYS725 SER726 GLU727 VAL728 LEU729 LYS730 SER731 THR732 GLY733 GLN734 LYS735 PRO736 GLY737 LYS738 VAL739 SER740 VAL741 GLU742 GLY743 LYS744 GLU745 VAL746 GLU747 VAL748 THR749 GLY750 SER751 THR752 VAL753 THR754 SER755 TYR756 TRP757 ALA758 ASN759 LYS760 SER761 GLY762 ALA763 PRO764 ALA765 THR766 SER767 TYR768 ARG769 PHE770 ALA771 ILE772 GLY773 GLY774 SER775 ASP776 ALA777 ASP778 TYR779 GLN780 ASN781 ALA782 TRP783 SER784 SER785 ILE786 VAL787 GLY788 |
Unit 3 | L4C1789 SO41790 CL1791 CL1792 |
Unit 4 | L4C1789 SO41790 CL1791 CL1792 |
Perl script: | PDBscan.pl (15 Sep 2016) |
Author: | Peter Slickers (slickers@leibniz-fli.de), IMB Jena, Germany |