2JAP - Sequence, Chains, Asymmetric and Biological Units

• Title: CLAVULANIC ACID DEHYDROGENASE: STRUCTURAL AND BIOCHEMICAL ANALYSIS OF THE FINAL STEP IN THE BIOSYNTHESIS OF THE BETA- LACTAMASE INHIBITOR CLAVULANIC ACID
• Keywords: SHORT-CHAIN DEHYDROGENASE/REDUCTASE, OXIDOREDUCTASE, ANTIBIO BIOSYNTHESIS, BETA-LACTAMASE INHIBITOR
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	2JAP	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	CLAVALDEHYDE DEHYDROGENASE	A	245	1832	0
2	Protein	CLAVALDEHYDE DEHYDROGENASE	B	245	1832	0
3	Protein	CLAVALDEHYDE DEHYDROGENASE	C	246	1839	0
4	Protein	CLAVALDEHYDE DEHYDROGENASE	D	245	1832	0
5	Ligand	CLAVALDEHYDE DEHYDROGENASE	A	2	0	62
6	Ligand	CLAVALDEHYDE DEHYDROGENASE	B	2	0	62
7	Ligand	CLAVALDEHYDE DEHYDROGENASE	C	2	0	62
8	Ligand	CLAVALDEHYDE DEHYDROGENASE	D	2	0	62
9	Water			253	0	253
total				1242	7335	501

Proteins

Unit 1	SER 3 ALA 4 LEU 5 GLN 6 GLY 7 LYS 8 VAL 9 ALA 10 LEU 11 ILE 12 THR 13 GLY 14 ALA 15 SER 16 SER 17 GLY 18 ILE 19 GLY 20 GLU 21 ALA 22 THR 23 ALA 24 ARG 25 ALA 26 LEU 27 ALA 28 ALA 29 GLU 30 GLY 31 ALA 32 ALA 33 VAL 34 ALA 35 ILE 36 ALA 37 ALA 38 ARG 39 ARG 40 VAL 41 GLU 42 LYS 43 LEU 44 ARG 45 ALA 46 LEU 47 GLY 48 ASP 49 GLU 50 LEU 51 THR 52 ALA 53 ALA 54 GLY 55 ALA 56 LYS 57 VAL 58 HIS 59 VAL 60 LEU 61 GLU 62 LEU 63 ASP 64 VAL 65 ALA 66 ASP 67 ARG 68 GLN 69 GLY 70 VAL 71 ASP 72 ALA 73 ALA 74 VAL 75 ALA 76 SER 77 THR 78 VAL 79 GLU 80 ALA 81 LEU 82 GLY 83 GLY 84 LEU 85 ASP 86 ILE 87 LEU 88 VAL 89 ASN 90 ASN 91 ALA 92 GLY 93 ILE 94 MET 95 LEU 96 LEU 97 GLY 98 PRO 99 VAL 100 GLU 101 ASP 102 ALA 103 ASP 104 THR 105 THR 106 ASP 107 TRP 108 THR 109 ARG 110 MET 111 ILE 112 ASP 113 THR 114 ASN 115 LEU 116 LEU 117 GLY 118 LEU 119 MET 120 TYR 121 MET 122 THR 123 ARG 124 ALA 125 ALA 126 LEU 127 PRO 128 HIS 129 LEU 130 LEU 131 ARG 132 SER 133 LYS 134 GLY 135 THR 136 VAL 137 VAL 138 GLN 139 MET 140 SER 141 SER 142 ILE 143 ALA 144 GLY 145 ARG 146 VAL 147 ASN 148 VAL 149 ARG 150 ASN 151 ALA 152 ALA 153 VAL 154 TYR 155 GLN 156 ALA 157 THR 158 LYS 159 PHE 160 GLY 161 VAL 162 ASN 163 ALA 164 PHE 165 SER 166 GLU 167 THR 168 LEU 169 ARG 170 GLN 171 GLU 172 VAL 173 THR 174 GLU 175 ARG 176 GLY 177 VAL 178 ARG 179 VAL 180 VAL 181 VAL 182 ILE 183 GLU 184 PRO 185 GLY 186 THR 187 THR 188 ASP 189 THR 190 GLU 191 LEU 192 ARG 193 GLY 194 HIS 195 ILE 196 THR 197 HIS 198 THR 199 ALA 200 THR 201 LYS 202 GLU 203 MET 204 TYR 205 GLU 206 GLN 207 ARG 208 ILE 209 SER 210 GLN 211 ILE 212 ARG 213 LYS 214 LEU 215 GLN 216 ALA 217 GLN 218 ASP 219 ILE 220 ALA 221 GLU 222 ALA 223 VAL 224 ARG 225 TYR 226 ALA 227 VAL 228 THR 229 ALA 230 PRO 231 HIS 232 HIS 233 ALA 234 THR 235 VAL 236 HIS 237 GLU 238 ILE 239 PHE 240 ILE 241 ARG 242 PRO 243 THR 244 ASP 245 GLN 246 VAL 247
Unit 2	SER 3 ALA 4 LEU 5 GLN 6 GLY 7 LYS 8 VAL 9 ALA 10 LEU 11 ILE 12 THR 13 GLY 14 ALA 15 SER 16 SER 17 GLY 18 ILE 19 GLY 20 GLU 21 ALA 22 THR 23 ALA 24 ARG 25 ALA 26 LEU 27 ALA 28 ALA 29 GLU 30 GLY 31 ALA 32 ALA 33 VAL 34 ALA 35 ILE 36 ALA 37 ALA 38 ARG 39 ARG 40 VAL 41 GLU 42 LYS 43 LEU 44 ARG 45 ALA 46 LEU 47 GLY 48 ASP 49 GLU 50 LEU 51 THR 52 ALA 53 ALA 54 GLY 55 ALA 56 LYS 57 VAL 58 HIS 59 VAL 60 LEU 61 GLU 62 LEU 63 ASP 64 VAL 65 ALA 66 ASP 67 ARG 68 GLN 69 GLY 70 VAL 71 ASP 72 ALA 73 ALA 74 VAL 75 ALA 76 SER 77 THR 78 VAL 79 GLU 80 ALA 81 LEU 82 GLY 83 GLY 84 LEU 85 ASP 86 ILE 87 LEU 88 VAL 89 ASN 90 ASN 91 ALA 92 GLY 93 ILE 94 MET 95 LEU 96 LEU 97 GLY 98 PRO 99 VAL 100 GLU 101 ASP 102 ALA 103 ASP 104 THR 105 THR 106 ASP 107 TRP 108 THR 109 ARG 110 MET 111 ILE 112 ASP 113 THR 114 ASN 115 LEU 116 LEU 117 GLY 118 LEU 119 MET 120 TYR 121 MET 122 THR 123 ARG 124 ALA 125 ALA 126 LEU 127 PRO 128 HIS 129 LEU 130 LEU 131 ARG 132 SER 133 LYS 134 GLY 135 THR 136 VAL 137 VAL 138 GLN 139 MET 140 SER 141 SER 142 ILE 143 ALA 144 GLY 145 ARG 146 VAL 147 ASN 148 VAL 149 ARG 150 ASN 151 ALA 152 ALA 153 VAL 154 TYR 155 GLN 156 ALA 157 THR 158 LYS 159 PHE 160 GLY 161 VAL 162 ASN 163 ALA 164 PHE 165 SER 166 GLU 167 THR 168 LEU 169 ARG 170 GLN 171 GLU 172 VAL 173 THR 174 GLU 175 ARG 176 GLY 177 VAL 178 ARG 179 VAL 180 VAL 181 VAL 182 ILE 183 GLU 184 PRO 185 GLY 186 THR 187 THR 188 ASP 189 THR 190 GLU 191 LEU 192 ARG 193 GLY 194 HIS 195 ILE 196 THR 197 HIS 198 THR 199 ALA 200 THR 201 LYS 202 GLU 203 MET 204 TYR 205 GLU 206 GLN 207 ARG 208 ILE 209 SER 210 GLN 211 ILE 212 ARG 213 LYS 214 LEU 215 GLN 216 ALA 217 GLN 218 ASP 219 ILE 220 ALA 221 GLU 222 ALA 223 VAL 224 ARG 225 TYR 226 ALA 227 VAL 228 THR 229 ALA 230 PRO 231 HIS 232 HIS 233 ALA 234 THR 235 VAL 236 HIS 237 GLU 238 ILE 239 PHE 240 ILE 241 ARG 242 PRO 243 THR 244 ASP 245 GLN 246 VAL 247
Unit 3	PRO 2 SER 3 ALA 4 LEU 5 GLN 6 GLY 7 LYS 8 VAL 9 ALA 10 LEU 11 ILE 12 THR 13 GLY 14 ALA 15 SER 16 SER 17 GLY 18 ILE 19 GLY 20 GLU 21 ALA 22 THR 23 ALA 24 ARG 25 ALA 26 LEU 27 ALA 28 ALA 29 GLU 30 GLY 31 ALA 32 ALA 33 VAL 34 ALA 35 ILE 36 ALA 37 ALA 38 ARG 39 ARG 40 VAL 41 GLU 42 LYS 43 LEU 44 ARG 45 ALA 46 LEU 47 GLY 48 ASP 49 GLU 50 LEU 51 THR 52 ALA 53 ALA 54 GLY 55 ALA 56 LYS 57 VAL 58 HIS 59 VAL 60 LEU 61 GLU 62 LEU 63 ASP 64 VAL 65 ALA 66 ASP 67 ARG 68 GLN 69 GLY 70 VAL 71 ASP 72 ALA 73 ALA 74 VAL 75 ALA 76 SER 77 THR 78 VAL 79 GLU 80 ALA 81 LEU 82 GLY 83 GLY 84 LEU 85 ASP 86 ILE 87 LEU 88 VAL 89 ASN 90 ASN 91 ALA 92 GLY 93 ILE 94 MET 95 LEU 96 LEU 97 GLY 98 PRO 99 VAL 100 GLU 101 ASP 102 ALA 103 ASP 104 THR 105 THR 106 ASP 107 TRP 108 THR 109 ARG 110 MET 111 ILE 112 ASP 113 THR 114 ASN 115 LEU 116 LEU 117 GLY 118 LEU 119 MET 120 TYR 121 MET 122 THR 123 ARG 124 ALA 125 ALA 126 LEU 127 PRO 128 HIS 129 LEU 130 LEU 131 ARG 132 SER 133 LYS 134 GLY 135 THR 136 VAL 137 VAL 138 GLN 139 MET 140 SER 141 SER 142 ILE 143 ALA 144 GLY 145 ARG 146 VAL 147 ASN 148 VAL 149 ARG 150 ASN 151 ALA 152 ALA 153 VAL 154 TYR 155 GLN 156 ALA 157 THR 158 LYS 159 PHE 160 GLY 161 VAL 162 ASN 163 ALA 164 PHE 165 SER 166 GLU 167 THR 168 LEU 169 ARG 170 GLN 171 GLU 172 VAL 173 THR 174 GLU 175 ARG 176 GLY 177 VAL 178 ARG 179 VAL 180 VAL 181 VAL 182 ILE 183 GLU 184 PRO 185 GLY 186 THR 187 THR 188 ASP 189 THR 190 GLU 191 LEU 192 ARG 193 GLY 194 HIS 195 ILE 196 THR 197 HIS 198 THR 199 ALA 200 THR 201 LYS 202 GLU 203 MET 204 TYR 205 GLU 206 GLN 207 ARG 208 ILE 209 SER 210 GLN 211 ILE 212 ARG 213 LYS 214 LEU 215 GLN 216 ALA 217 GLN 218 ASP 219 ILE 220 ALA 221 GLU 222 ALA 223 VAL 224 ARG 225 TYR 226 ALA 227 VAL 228 THR 229 ALA 230 PRO 231 HIS 232 HIS 233 ALA 234 THR 235 VAL 236 HIS 237 GLU 238 ILE 239 PHE 240 ILE 241 ARG 242 PRO 243 THR 244 ASP 245 GLN 246 VAL 247
Unit 4	SER 3 ALA 4 LEU 5 GLN 6 GLY 7 LYS 8 VAL 9 ALA 10 LEU 11 ILE 12 THR 13 GLY 14 ALA 15 SER 16 SER 17 GLY 18 ILE 19 GLY 20 GLU 21 ALA 22 THR 23 ALA 24 ARG 25 ALA 26 LEU 27 ALA 28 ALA 29 GLU 30 GLY 31 ALA 32 ALA 33 VAL 34 ALA 35 ILE 36 ALA 37 ALA 38 ARG 39 ARG 40 VAL 41 GLU 42 LYS 43 LEU 44 ARG 45 ALA 46 LEU 47 GLY 48 ASP 49 GLU 50 LEU 51 THR 52 ALA 53 ALA 54 GLY 55 ALA 56 LYS 57 VAL 58 HIS 59 VAL 60 LEU 61 GLU 62 LEU 63 ASP 64 VAL 65 ALA 66 ASP 67 ARG 68 GLN 69 GLY 70 VAL 71 ASP 72 ALA 73 ALA 74 VAL 75 ALA 76 SER 77 THR 78 VAL 79 GLU 80 ALA 81 LEU 82 GLY 83 GLY 84 LEU 85 ASP 86 ILE 87 LEU 88 VAL 89 ASN 90 ASN 91 ALA 92 GLY 93 ILE 94 MET 95 LEU 96 LEU 97 GLY 98 PRO 99 VAL 100 GLU 101 ASP 102 ALA 103 ASP 104 THR 105 THR 106 ASP 107 TRP 108 THR 109 ARG 110 MET 111 ILE 112 ASP 113 THR 114 ASN 115 LEU 116 LEU 117 GLY 118 LEU 119 MET 120 TYR 121 MET 122 THR 123 ARG 124 ALA 125 ALA 126 LEU 127 PRO 128 HIS 129 LEU 130 LEU 131 ARG 132 SER 133 LYS 134 GLY 135 THR 136 VAL 137 VAL 138 GLN 139 MET 140 SER 141 SER 142 ILE 143 ALA 144 GLY 145 ARG 146 VAL 147 ASN 148 VAL 149 ARG 150 ASN 151 ALA 152 ALA 153 VAL 154 TYR 155 GLN 156 ALA 157 THR 158 LYS 159 PHE 160 GLY 161 VAL 162 ASN 163 ALA 164 PHE 165 SER 166 GLU 167 THR 168 LEU 169 ARG 170 GLN 171 GLU 172 VAL 173 THR 174 GLU 175 ARG 176 GLY 177 VAL 178 ARG 179 VAL 180 VAL 181 VAL 182 ILE 183 GLU 184 PRO 185 GLY 186 THR 187 THR 188 ASP 189 THR 190 GLU 191 LEU 192 ARG 193 GLY 194 HIS 195 ILE 196 THR 197 HIS 198 THR 199 ALA 200 THR 201 LYS 202 GLU 203 MET 204 TYR 205 GLU 206 GLN 207 ARG 208 ILE 209 SER 210 GLN 211 ILE 212 ARG 213 LYS 214 LEU 215 GLN 216 ALA 217 GLN 218 ASP 219 ILE 220 ALA 221 GLU 222 ALA 223 VAL 224 ARG 225 TYR 226 ALA 227 VAL 228 THR 229 ALA 230 PRO 231 HIS 232 HIS 233 ALA 234 THR 235 VAL 236 HIS 237 GLU 238 ILE 239 PHE 240 ILE 241 ARG 242 PRO 243 THR 244 ASP 245 GLN 246 VAL 247

Ligands

Unit 5	NDP 1248 J01 1249
Unit 6	NDP 1248 J01 1249
Unit 7	NDP 1248 J01 1249
Unit 8	NDP 1248 J01 1249