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Sequence, Chains, Asymmetric and Biological Units

Title 2 ANGSTROM X-RAY STRUCTURE OF THE YEAST ESCRT-I VPS28 C-TERM COMPLEX WITH THE NZF-N DOMAIN FROM ESCRT-II
Keywords ZINC-FINGER, METAL-BINDING, PROTEIN TRANSPORT
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   2J9U     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 28  A 94 769 0
2  Protein   VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 36  B 47 352 0
3  Protein   VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 28  C 94 769 0
4  Protein   VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 36  D 47 352 0
5  Ligand   VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 36  B 1 0 1
6  Ligand   VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 36  D 1 0 1
7 Water     51 0 51
total       335 2242 53

Proteins
Unit 1 PHE148 ASN149 ALA150 LYS151 TYR152 VAL153 ALA154 GLU155 ALA156 THR157 GLY158 ASN159 PHE160 ILE161 THR162 VAL163 MET164 ASP165 ALA166 LEU167 LYS168 LEU169 ASN170 TYR171 ASN172 ALA173 LYS174 ASP175 GLN176 LEU177 HIS178 PRO179 LEU180 LEU181 ALA182 GLU183 LEU184 LEU185 ILE186 SER187 ILE188 ASN189 ARG190 VAL191 THR192 ARG193 ASP194 ASP195 PHE196 GLU197 ASN198 ARG199 SER200 LYS201 LEU202 ILE203 ASP204 TRP205 ILE206 VAL207 ARG208 ILE209 ASN210 LYS211 LEU212 SER213 ILE214 GLY215 ASP216 THR217 LEU218 THR219 GLU220 THR221 GLN222 ILE223 ARG224 GLU225 LEU226 LEU227 PHE228 ASP229 LEU230 GLU231 LEU232 ALA233 TYR234 LYS235 SER236 PHE237 TYR238 ALA239 LEU240 LEU241
Unit 2 VAL115 SER116 THR117 TRP118 VAL119 CYS120 PRO121 ILE122 CYS123 MET124 VAL125 SER126 ASN127 GLU128 THR129 GLN130 GLY131 GLU132 PHE133 THR134 LYS135 ASP136 THR137 LEU138 PRO139 THR140 PRO141 ILE142 CYS143 ILE144 ASN145 CYS146 GLY147 VAL148 PRO149 ALA150 ASP151 TYR152 GLU153 LEU154 THR155 LYS156 SER157 SER158 ILE159 ASN160 CYS161
Unit 3 PHE148 ASN149 ALA150 LYS151 TYR152 VAL153 ALA154 GLU155 ALA156 THR157 GLY158 ASN159 PHE160 ILE161 THR162 VAL163 MET164 ASP165 ALA166 LEU167 LYS168 LEU169 ASN170 TYR171 ASN172 ALA173 LYS174 ASP175 GLN176 LEU177 HIS178 PRO179 LEU180 LEU181 ALA182 GLU183 LEU184 LEU185 ILE186 SER187 ILE188 ASN189 ARG190 VAL191 THR192 ARG193 ASP194 ASP195 PHE196 GLU197 ASN198 ARG199 SER200 LYS201 LEU202 ILE203 ASP204 TRP205 ILE206 VAL207 ARG208 ILE209 ASN210 LYS211 LEU212 SER213 ILE214 GLY215 ASP216 THR217 LEU218 THR219 GLU220 THR221 GLN222 ILE223 ARG224 GLU225 LEU226 LEU227 PHE228 ASP229 LEU230 GLU231 LEU232 ALA233 TYR234 LYS235 SER236 PHE237 TYR238 ALA239 LEU240 LEU241
Unit 4 VAL115 SER116 THR117 TRP118 VAL119 CYS120 PRO121 ILE122 CYS123 MET124 VAL125 SER126 ASN127 GLU128 THR129 GLN130 GLY131 GLU132 PHE133 THR134 LYS135 ASP136 THR137 LEU138 PRO139 THR140 PRO141 ILE142 CYS143 ILE144 ASN145 CYS146 GLY147 VAL148 PRO149 ALA150 ASP151 TYR152 GLU153 LEU154 THR155 LYS156 SER157 SER158 ILE159 ASN160 CYS161

Ligands
Unit 5 ZN1162
Unit 6 ZN1162

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany