2J7Q - Sequence, Chains, Asymmetric and Biological Units

• Title: CRYSTAL STRUCTURE OF THE UBIQUITIN-SPECIFIC PROTEASE ENCODED BY MURINE CYTOMEGALOVIRUS TEGUMENT PROTEIN M48 IN COMPLEX WITH A UBQUITIN-BASED SUICIDE SUBSTRATE
• Keywords: HERPESVIRIDAE, NUCLEAR PROTEIN, COVALENT ENZYME-LIGAND COMPL DEUBIQUITINATING ENZYME, HYDROLASE, PAPAIN-LIKE FOLD, CYSTE PROTEASE
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	2J7Q	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	MCMV TEGUMENT PROTEIN M48 ENCODED UBIQUITIN- SPEC  PROTEASE, M48USP	A	232	1732	48
2	Protein	UBIQUITIN	B	75	597	0
3	Protein	MCMV TEGUMENT PROTEIN M48 ENCODED UBIQUITIN- SPEC  PROTEASE, M48USP	C	232	1733	48
4	Protein	UBIQUITIN	D	75	597	0
5	Ligand	MCMV TEGUMENT PROTEIN M48 ENCODED UBIQUITIN- SPEC  PROTEASE, M48USP	A	2	0	9
6	Ligand	UBIQUITIN	B	2	0	14
7	Ligand	MCMV TEGUMENT PROTEIN M48 ENCODED UBIQUITIN- SPEC  PROTEASE, M48USP	C	2	0	14
8	Ligand	UBIQUITIN	D	1	0	1
9	Water			707	0	707
total				1328	4659	841

Proteins

Unit 1	MSE 1 LYS 2 ILE 3 VAL 4 ARG 5 ALA 6 SER 7 ARG 8 ASP 9 GLN 10 SER 11 ALA 12 PRO 13 VAL 14 TYR 15 GLY 16 PRO 17 ARG 18 ALA 19 GLY 20 SER 21 GLN 22 CYS 23 MSE 24 SER 25 ASN 26 CYS 27 PHE 28 THR 29 PHE 30 LEU 31 HIS 32 THR 33 CYS 34 TYR 35 LEU 36 MSE 37 GLY 38 ILE 39 ASP 40 PRO 41 VAL 42 LEU 43 ASP 44 THR 45 THR 46 SER 47 LEU 48 ASP 49 ALA 50 VAL 51 LEU 52 ASP 53 SER 54 GLY 55 ALA 56 ARG 57 LEU 58 ASP 59 ALA 60 ILE 61 ALA 62 ASP 63 GLU 64 LYS 65 VAL 66 LYS 67 ARG 68 GLN 69 ALA 70 LEU 71 THR 72 ASP 73 HIS 74 PRO 75 TYR 76 ARG 77 LEU 78 GLY 79 THR 80 GLU 81 ILE 82 PRO 83 THR 84 VAL 85 ILE 86 GLU 87 THR 88 PRO 89 ALA 90 GLY 91 ILE 92 THR 93 GLY 94 HIS 95 ALA 96 LEU 97 SER 98 ARG 99 PRO 100 PHE 101 ASN 102 GLY 103 THR 104 ALA 105 GLU 106 THR 107 GLN 108 ASP 109 LEU 110 GLY 111 GLY 112 TYR 113 LYS 114 CYS 115 LEU 116 GLY 117 ILE 118 LEU 119 ASP 120 PHE 121 LEU 122 THR 123 TYR 124 ALA 125 ARG 126 GLY 127 LYS 128 PRO 129 LEU 130 PRO 131 VAL 132 TYR 133 ILE 134 ILE 135 VAL 136 THR 137 VAL 138 GLY 139 VAL 140 HIS 141 THR 142 ARG 143 GLY 144 VAL 145 ILE 146 VAL 147 ALA 148 ARG 149 GLY 150 ALA 151 THR 152 TYR 153 VAL 154 PHE 155 ASP 156 PRO 157 HIS 158 THR 159 THR 160 ASP 161 LEU 162 SER 163 ALA 164 GLU 165 ALA 166 ALA 167 VAL 168 TYR 169 VAL 170 CYS 171 ASP 172 ASP 173 PHE 174 THR 175 GLU 176 ALA 177 ILE 178 SER 179 ALA 180 LEU 181 SER 182 PHE 183 PHE 184 THR 185 GLU 186 MSE 187 ILE 188 GLY 189 ASP 190 PHE 191 TYR 192 TYR 193 ASP 194 ALA 195 VAL 196 LEU 197 VAL 198 TYR 199 PHE 200 THR 201 ARG 202 CYS 203 ARG 204 THR 205 THR 206 LEU 207 ILE 208 SER 209 PRO 210 SER 211 GLU 212 LEU 213 LEU 214 VAL 215 GLN 216 ILE 217 MSE 218 ASP 219 GLN 220 TYR 221 LYS 222 ASP 223 PRO 224 ASP 225 ILE 226 ASP 227 ALA 228 SER 229 VAL 230 MSE 231 SER 232
Unit 2	MET 1 GLN 2 ILE 3 PHE 4 VAL 5 LYS 6 THR 7 LEU 8 THR 9 GLY 10 LYS 11 THR 12 ILE 13 THR 14 LEU 15 GLU 16 VAL 17 GLU 18 PRO 19 SER 20 ASP 21 THR 22 ILE 23 GLU 24 ASN 25 VAL 26 LYS 27 ALA 28 LYS 29 ILE 30 GLN 31 ASP 32 LYS 33 GLU 34 GLY 35 ILE 36 PRO 37 PRO 38 ASP 39 GLN 40 GLN 41 ARG 42 LEU 43 ILE 44 PHE 45 ALA 46 GLY 47 LYS 48 GLN 49 LEU 50 GLU 51 ASP 52 GLY 53 ARG 54 THR 55 LEU 56 SER 57 ASP 58 TYR 59 ASN 60 ILE 61 GLN 62 LYS 63 GLU 64 SER 65 THR 66 LEU 67 HIS 68 LEU 69 VAL 70 LEU 71 ARG 72 LEU 73 ARG 74 GLY 75
Unit 3	MSE 1 LYS 2 ILE 3 VAL 4 ARG 5 ALA 6 SER 7 ARG 8 ASP 9 GLN 10 SER 11 ALA 12 PRO 13 VAL 14 TYR 15 GLY 16 PRO 17 ARG 18 ALA 19 GLY 20 SER 21 GLN 22 CYS 23 MSE 24 SER 25 ASN 26 CYS 27 PHE 28 THR 29 PHE 30 LEU 31 HIS 32 THR 33 CYS 34 TYR 35 LEU 36 MSE 37 GLY 38 ILE 39 ASP 40 PRO 41 VAL 42 LEU 43 ASP 44 THR 45 THR 46 SER 47 LEU 48 ASP 49 ALA 50 VAL 51 LEU 52 ASP 53 SER 54 GLY 55 ALA 56 ARG 57 LEU 58 ASP 59 ALA 60 ILE 61 ALA 62 ASP 63 GLU 64 LYS 65 VAL 66 LYS 67 ARG 68 GLN 69 ALA 70 LEU 71 THR 72 ASP 73 HIS 74 PRO 75 TYR 76 ARG 77 LEU 78 GLY 79 THR 80 GLU 81 ILE 82 PRO 83 THR 84 VAL 85 ILE 86 GLU 87 THR 88 PRO 89 ALA 90 GLY 91 ILE 92 THR 93 GLY 94 HIS 95 ALA 96 LEU 97 SER 98 ARG 99 PRO 100 PHE 101 ASN 102 GLY 103 THR 104 ALA 105 GLU 106 THR 107 GLN 108 ASP 109 LEU 110 GLY 111 GLY 112 TYR 113 LYS 114 CYS 115 LEU 116 GLY 117 ILE 118 LEU 119 ASP 120 PHE 121 LEU 122 THR 123 TYR 124 ALA 125 ARG 126 GLY 127 LYS 128 PRO 129 LEU 130 PRO 131 VAL 132 TYR 133 ILE 134 ILE 135 VAL 136 THR 137 VAL 138 GLY 139 VAL 140 PHE 141 THR 142 ARG 143 GLY 144 VAL 145 ILE 146 VAL 147 ALA 148 ARG 149 GLY 150 ALA 151 THR 152 TYR 153 VAL 154 PHE 155 ASP 156 PRO 157 HIS 158 THR 159 THR 160 ASP 161 LEU 162 SER 163 ALA 164 GLU 165 ALA 166 ALA 167 VAL 168 TYR 169 VAL 170 CYS 171 ASP 172 ASP 173 PHE 174 THR 175 GLU 176 ALA 177 ILE 178 SER 179 ALA 180 LEU 181 SER 182 PHE 183 PHE 184 THR 185 GLU 186 MSE 187 ILE 188 GLY 189 ASP 190 PHE 191 TYR 192 TYR 193 ASP 194 ALA 195 VAL 196 LEU 197 VAL 198 TYR 199 PHE 200 THR 201 ARG 202 CYS 203 ARG 204 THR 205 THR 206 LEU 207 ILE 208 SER 209 PRO 210 SER 211 GLU 212 LEU 213 LEU 214 VAL 215 GLN 216 ILE 217 MSE 218 ASP 219 GLN 220 TYR 221 LYS 222 ASP 223 PRO 224 ASP 225 ILE 226 ASP 227 ALA 228 SER 229 VAL 230 MSE 231 SER 232
Unit 4	MET 1 GLN 2 ILE 3 PHE 4 VAL 5 LYS 6 THR 7 LEU 8 THR 9 GLY 10 LYS 11 THR 12 ILE 13 THR 14 LEU 15 GLU 16 VAL 17 GLU 18 PRO 19 SER 20 ASP 21 THR 22 ILE 23 GLU 24 ASN 25 VAL 26 LYS 27 ALA 28 LYS 29 ILE 30 GLN 31 ASP 32 LYS 33 GLU 34 GLY 35 ILE 36 PRO 37 PRO 38 ASP 39 GLN 40 GLN 41 ARG 42 LEU 43 ILE 44 PHE 45 ALA 46 GLY 47 LYS 48 GLN 49 LEU 50 GLU 51 ASP 52 GLY 53 ARG 54 THR 55 LEU 56 SER 57 ASP 58 TYR 59 ASN 60 ILE 61 GLN 62 LYS 63 GLU 64 SER 65 THR 66 LEU 67 HIS 68 LEU 69 VAL 70 LEU 71 ARG 72 LEU 73 ARG 74 GLY 75

Ligands

Unit 5	MG 1234 GVE 1235
Unit 6	MG 1076 PG4 1077
Unit 7	GOL 1234 GVE 1235
Unit 8	MG 1076