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Sequence, Chains, Asymmetric and Biological Units

Title STRUCTURE OF THE TYROSYL TRNA SYNTHETASE FROM ACANTHAMOEBA P MIMIVIRUS COMPLEXED WITH TYROSYNOL
Keywords LIGASE, PROTEIN BIOSYNTHESIS, ATP-BINDING
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   2J5B     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   TYROSYL-TRNA SYNTHETASE  A 322 2591 0
2  Protein   TYROSYL-TRNA SYNTHETASE  B 321 2578 0
3  Ligand   TYROSYL-TRNA SYNTHETASE  A 1 0 12
4  Ligand   TYROSYL-TRNA SYNTHETASE  B 1 0 12
5 Water     330 0 330
total       975 5169 354

Proteins
Unit 1 ASP-3 HIS-2 THR-1 ASN0 ASN1 GLU2 HIS3 ARG4 LEU5 THR6 GLN7 LEU8 LEU9 SER10 ILE11 ALA12 GLU13 GLU14 CYS15 GLU16 THR17 LEU18 ASP19 ARG20 LEU21 LYS22 GLN23 LEU24 VAL25 ASP26 SER27 GLY28 ARG29 ILE30 PHE31 THR32 ALA33 TYR34 ASN35 GLY36 PHE37 GLU38 PRO39 SER40 GLY41 ARG42 ILE43 HIS44 ILE45 ALA46 GLN47 ALA48 LEU49 ILE50 THR51 VAL52 MET53 ASN54 THR55 ASN56 ASN57 MET58 ILE59 GLU60 CYS61 GLY62 GLY63 GLN64 MET65 ILE66 ILE67 TYR68 ILE69 ALA70 ASP71 TRP72 PHE73 ALA74 LYS75 MET76 ASN77 LEU78 LYS79 MET80 ASN81 GLY82 ASP83 ILE84 ASN85 LYS86 ILE87 ARG88 GLU89 LEU90 GLY91 ARG92 TYR93 PHE94 ILE95 GLU96 VAL97 PHE98 LYS99 ALA100 CYS101 GLY102 ILE103 ASN104 LEU105 ASP106 GLY107 THR108 ARG109 PHE110 ILE111 TRP112 ALA113 SER114 GLU115 PHE116 ILE117 ALA118 SER119 ASN120 PRO121 SER122 TYR123 ILE124 GLU125 ARG126 MET127 LEU128 ASP129 ILE130 ALA131 GLU132 PHE133 SER134 THR135 ILE136 SER137 ARG138 VAL139 LYS140 ARG141 ILE159 PHE160 TYR161 PRO162 CYS163 MET164 GLN165 ALA166 ALA167 ASP168 VAL169 PHE170 GLU171 LEU172 VAL173 PRO174 GLU175 GLY176 ILE177 ASP178 ILE179 CYS180 GLN181 LEU182 GLY183 ILE184 ASP185 GLN186 ARG187 LYS188 VAL189 ASN190 MET191 LEU192 ALA193 ILE194 GLU195 TYR196 ALA197 ASN198 ASP199 ARG200 GLY201 LEU202 LYS203 ILE204 PRO205 ILE206 SER207 LEU208 SER209 HIS210 HIS211 MET212 LEU213 MET214 SER215 LEU216 SER217 GLY218 PRO219 LYS220 LYS221 LYS222 MET223 SER224 LYS225 SER226 ASP227 PRO228 GLN229 GLY230 ALA231 ILE232 PHE233 MET234 ASP235 ASP236 THR237 GLU238 GLN239 GLU240 VAL241 SER242 GLU243 LYS244 ILE245 SER246 ARG247 ALA248 TYR249 CYS250 THR251 ASP252 GLU253 THR254 PHE255 ASP256 ASN257 PRO258 ILE259 PHE260 GLU261 TYR262 ILE263 LYS264 TYR265 LEU266 LEU267 LEU268 ARG269 TRP270 PHE271 GLY272 THR273 LEU274 ASN275 LEU276 CYS277 GLY278 LYS279 ILE280 TYR281 THR282 ASP283 ILE284 GLU285 SER286 ILE287 GLN288 GLU289 ASP290 PHE291 SER292 SER293 MET294 ASN295 LYS296 ARG297 GLU298 LEU299 LYS300 THR301 ASP302 VAL303 ALA304 ASN305 TYR306 ILE307 ASN308 THR309 ILE310 ILE311 ASP312 LEU313 VAL314 ARG315 GLU316 HIS317 PHE318 LYS319 LYS320 PRO321 GLU322 LEU323 SER324 GLU325 LEU326 LEU327 SER328 ASN329 VAL330 LYS331 SER332 TYR333 GLN334 GLN335
Unit 2 THR-1 ASN0 ASN1 GLU2 HIS3 ARG4 LEU5 THR6 GLN7 LEU8 LEU9 SER10 ILE11 ALA12 GLU13 GLU14 CYS15 GLU16 THR17 LEU18 ASP19 ARG20 LEU21 LYS22 GLN23 LEU24 VAL25 ASP26 SER27 GLY28 ARG29 ILE30 PHE31 THR32 ALA33 TYR34 ASN35 GLY36 PHE37 GLU38 PRO39 SER40 GLY41 ARG42 ILE43 HIS44 ILE45 ALA46 GLN47 ALA48 LEU49 ILE50 THR51 VAL52 MET53 ASN54 THR55 ASN56 ASN57 MET58 ILE59 GLU60 CYS61 GLY62 GLY63 GLN64 MET65 ILE66 ILE67 TYR68 ILE69 ALA70 ASP71 TRP72 PHE73 ALA74 LYS75 MET76 ASN77 LEU78 LYS79 MET80 ASN81 GLY82 ASP83 ILE84 ASN85 LYS86 ILE87 ARG88 GLU89 LEU90 GLY91 ARG92 TYR93 PHE94 ILE95 GLU96 VAL97 PHE98 LYS99 ALA100 CYS101 GLY102 ILE103 ASN104 LEU105 ASP106 GLY107 THR108 ARG109 PHE110 ILE111 TRP112 ALA113 SER114 GLU115 PHE116 ILE117 ALA118 SER119 ASN120 PRO121 SER122 TYR123 ILE124 GLU125 ARG126 MET127 LEU128 ASP129 ILE130 ALA131 GLU132 PHE133 SER134 THR135 ILE136 SER137 ARG138 VAL139 LYS140 ILE159 PHE160 TYR161 PRO162 CYS163 MET164 GLN165 ALA166 ALA167 ASP168 VAL169 PHE170 GLU171 LEU172 VAL173 PRO174 GLU175 GLY176 ILE177 ASP178 ILE179 CYS180 GLN181 LEU182 GLY183 ILE184 ASP185 GLN186 ARG187 LYS188 VAL189 ASN190 MET191 LEU192 ALA193 ILE194 GLU195 TYR196 ALA197 ASN198 ASP199 ARG200 GLY201 LEU202 LYS203 ILE204 PRO205 ILE206 SER207 LEU208 SER209 HIS210 HIS211 MET212 LEU213 MET214 SER215 LEU216 SER217 GLY218 PRO219 LYS220 LYS221 LYS222 MET223 SER224 LYS225 SER226 ASP227 PRO228 GLN229 GLY230 ALA231 ILE232 PHE233 MET234 ASP235 ASP236 THR237 GLU238 GLN239 GLU240 VAL241 SER242 GLU243 LYS244 ILE245 SER246 ARG247 ALA248 TYR249 CYS250 THR251 ASP252 GLU253 THR254 PHE255 ASP256 ASN257 PRO258 ILE259 PHE260 GLU261 TYR262 ILE263 LYS264 TYR265 LEU266 LEU267 LEU268 ARG269 TRP270 PHE271 GLY272 THR273 LEU274 ASN275 LEU276 CYS277 GLY278 LYS279 ILE280 TYR281 THR282 ASP283 ILE284 GLU285 SER286 ILE287 GLN288 GLU289 ASP290 PHE291 SER292 SER293 MET294 ASN295 LYS296 ARG297 GLU298 LEU299 LYS300 THR301 ASP302 VAL303 ALA304 ASN305 TYR306 ILE307 ASN308 THR309 ILE310 ILE311 ASP312 LEU313 VAL314 ARG315 GLU316 HIS317 PHE318 LYS319 LYS320 PRO321 GLU322 LEU323 SER324 GLU325 LEU326 LEU327 SER328 ASN329 VAL330 LYS331 SER332 TYR333 GLN334 GLN335 PRO336 SER337

Ligands
Unit 3 TYE1336
Unit 4 TYE1338

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany