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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE ANALYSIS OF CATALASE FROM EXIGUOBACTERIUM OXIDOTOLERANS
Keywords FUNCTIONAL CLASS, OXIDOREDUCTASE
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   2J2M     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   CATALASE  A 480 3894 0
2  Protein   CATALASE  B 480 3894 0
3  Protein   CATALASE  C 480 3894 0
4  Protein   CATALASE  D 480 3894 0
5  Ligand   CATALASE  A 1 0 43
6  Ligand   CATALASE  B 1 0 43
7  Ligand   CATALASE  C 1 0 43
8  Ligand   CATALASE  D 1 0 43
9 Water     536 0 536
total       2460 15576 708
Proteins
Unit 1 LYS6 LYS7 LEU8 THR9 THR10 ASN11 GLN12 GLY13 VAL14 PRO15 ILE16 GLY17 ASP18 ASN19 GLN20 ASN21 SER22 ARG23 THR24 ALA25 GLY26 ARG27 ARG28 GLY29 PRO30 THR31 LEU32 LEU33 GLU34 ASP35 TYR36 GLN37 LEU38 ILE39 GLU40 LYS41 ILE42 ALA43 HIS44 PHE45 ASP46 ARG47 GLU48 ARG49 VAL50 PRO51 GLU52 ARG53 VAL54 VAL55 HIS56 ALA57 ARG58 GLY59 PHE60 GLY61 ALA62 HIS63 GLY64 VAL65 PHE66 LYS67 VAL68 LYS69 ASN70 SER71 MET72 LYS73 LYS74 TYR75 THR76 LYS77 ALA78 ALA79 PHE80 LEU81 GLN82 GLU83 GLU84 GLY85 THR86 GLU87 VAL88 PRO89 VAL90 PHE91 ALA92 ARG93 PHE94 SER95 THR96 VAL97 ILE98 HIS99 GLY100 THR101 HIS102 SER103 PRO104 GLU105 THR106 LEU107 ARG108 ASP109 PRO110 ARG111 GLY112 PHE113 SER114 VAL115 LYS116 PHE117 TYR118 THR119 GLU120 GLU121 GLY122 ASN123 TRP124 ASP125 PHE126 VAL127 GLY128 ASN129 ASN130 LEU131 PRO132 VAL133 PHE134 PHE135 ILE136 ARG137 ASP138 ALA139 MET140 LYS141 PHE142 PRO143 ASP144 MET145 VAL146 HIS147 SER148 LEU149 LYS150 PRO151 ASP152 PRO153 ARG154 THR155 ASN156 ILE157 GLN158 ASP159 PRO160 ASP161 ARG162 TYR163 TRP164 ASP165 PHE166 MET167 THR168 LEU169 ARG170 PRO171 GLU172 SER173 THR174 ASN175 MET176 LEU177 MET178 HIS179 ILE180 PHE181 THR182 ASP183 GLU184 GLY185 ILE186 PRO187 ALA188 SER189 TYR190 ARG191 LYS192 MET193 ARG194 GLY195 SER196 SER197 VAL198 HIS199 SER200 PHE201 LYS202 TRP203 VAL204 ASN205 ALA206 HIS207 GLY208 ASN209 THR210 VAL211 TYR212 ILE213 LYS214 LEU215 ARG216 TRP217 VAL218 PRO219 LYS220 GLU221 GLY222 VAL223 HIS224 ASN225 LEU226 SER227 ALA228 ASP229 GLU230 ALA231 THR232 GLU233 VAL234 GLN235 GLY236 LYS237 ASP238 PHE239 ASN240 HIS241 ALA242 SER243 ASN244 ASP245 THR246 PHE247 GLN248 ALA249 ILE250 GLU251 ASN252 GLY253 ASP254 PHE255 PRO256 GLU257 TRP258 ASP259 LEU260 PHE261 VAL262 GLN263 VAL264 LEU265 ASP266 PRO267 ALA268 ASP269 VAL270 GLU271 ASN272 PHE273 ASP274 PHE275 ASP276 PRO277 LEU278 ASP279 ALA280 THR281 LYS282 ASP283 TRP284 PHE285 GLU286 ASP287 VAL288 ILE289 PRO290 PHE291 GLN292 HIS293 VAL294 GLY295 THR296 MET297 THR298 LEU299 ASN300 LYS301 ASN302 VAL303 ASP304 ASN305 TYR306 PHE307 ALA308 GLU309 THR310 GLU311 SER312 VAL313 GLY314 PHE315 ASN316 PRO317 GLY318 VAL319 LEU320 VAL321 PRO322 GLY323 MET324 LEU325 PRO326 SER327 GLU328 ASP329 LYS330 LEU331 LEU332 GLN333 GLY334 ARG335 LEU336 PHE337 SER338 TYR339 SER340 ASP341 THR342 GLN343 ARG344 HIS345 ARG346 ILE347 GLY348 PRO349 ASN350 TYR351 GLN352 GLN353 LEU354 PRO355 ILE356 ASN357 CYS358 PRO359 PHE360 ALA361 GLN362 VAL363 ASN364 ASN365 TYR366 GLN367 ARG368 ASP369 GLY370 ALA371 MET372 PRO373 PHE374 LYS375 GLN376 GLN377 THR378 SER379 SER380 VAL381 ASN382 TYR383 GLU384 PRO385 ASN386 ARG387 TYR388 GLN389 ASP390 GLU391 PRO392 LYS393 GLN394 THR395 PRO396 GLU397 TYR398 THR399 GLU400 ASP401 THR402 GLN403 PRO404 LEU405 HIS406 ASP407 ASP408 ILE409 HIS410 GLY411 ARG412 LEU413 GLU414 ILE415 GLU416 LYS417 THR418 ASN419 ASN420 PHE421 GLY422 GLN423 ALA424 GLY425 GLU426 VAL427 TYR428 ARG429 ARG430 MET431 THR432 GLU433 GLU434 GLU435 GLN436 MET437 ALA438 LEU439 LEU440 ASN441 ASN442 LEU443 VAL444 ASN445 ASP446 LEU447 GLN448 GLN449 VAL450 ARG451 HIS452 GLU453 ASN454 THR455 VAL456 LEU457 LEU458 ALA459 ILE460 CYS461 ASN462 PHE463 TYR464 ARG465 ALA466 ASP467 ALA468 SER469 LEU470 GLY471 GLU472 LYS473 LEU474 SER475 GLU476 ALA477 LEU478 ASN479 VAL480 ASP481 ILE482 LYS483 PRO484 PHE485
Unit 2 LYS6 LYS7 LEU8 THR9 THR10 ASN11 GLN12 GLY13 VAL14 PRO15 ILE16 GLY17 ASP18 ASN19 GLN20 ASN21 SER22 ARG23 THR24 ALA25 GLY26 ARG27 ARG28 GLY29 PRO30 THR31 LEU32 LEU33 GLU34 ASP35 TYR36 GLN37 LEU38 ILE39 GLU40 LYS41 ILE42 ALA43 HIS44 PHE45 ASP46 ARG47 GLU48 ARG49 VAL50 PRO51 GLU52 ARG53 VAL54 VAL55 HIS56 ALA57 ARG58 GLY59 PHE60 GLY61 ALA62 HIS63 GLY64 VAL65 PHE66 LYS67 VAL68 LYS69 ASN70 SER71 MET72 LYS73 LYS74 TYR75 THR76 LYS77 ALA78 ALA79 PHE80 LEU81 GLN82 GLU83 GLU84 GLY85 THR86 GLU87 VAL88 PRO89 VAL90 PHE91 ALA92 ARG93 PHE94 SER95 THR96 VAL97 ILE98 HIS99 GLY100 THR101 HIS102 SER103 PRO104 GLU105 THR106 LEU107 ARG108 ASP109 PRO110 ARG111 GLY112 PHE113 SER114 VAL115 LYS116 PHE117 TYR118 THR119 GLU120 GLU121 GLY122 ASN123 TRP124 ASP125 PHE126 VAL127 GLY128 ASN129 ASN130 LEU131 PRO132 VAL133 PHE134 PHE135 ILE136 ARG137 ASP138 ALA139 MET140 LYS141 PHE142 PRO143 ASP144 MET145 VAL146 HIS147 SER148 LEU149 LYS150 PRO151 ASP152 PRO153 ARG154 THR155 ASN156 ILE157 GLN158 ASP159 PRO160 ASP161 ARG162 TYR163 TRP164 ASP165 PHE166 MET167 THR168 LEU169 ARG170 PRO171 GLU172 SER173 THR174 ASN175 MET176 LEU177 MET178 HIS179 ILE180 PHE181 THR182 ASP183 GLU184 GLY185 ILE186 PRO187 ALA188 SER189 TYR190 ARG191 LYS192 MET193 ARG194 GLY195 SER196 SER197 VAL198 HIS199 SER200 PHE201 LYS202 TRP203 VAL204 ASN205 ALA206 HIS207 GLY208 ASN209 THR210 VAL211 TYR212 ILE213 LYS214 LEU215 ARG216 TRP217 VAL218 PRO219 LYS220 GLU221 GLY222 VAL223 HIS224 ASN225 LEU226 SER227 ALA228 ASP229 GLU230 ALA231 THR232 GLU233 VAL234 GLN235 GLY236 LYS237 ASP238 PHE239 ASN240 HIS241 ALA242 SER243 ASN244 ASP245 THR246 PHE247 GLN248 ALA249 ILE250 GLU251 ASN252 GLY253 ASP254 PHE255 PRO256 GLU257 TRP258 ASP259 LEU260 PHE261 VAL262 GLN263 VAL264 LEU265 ASP266 PRO267 ALA268 ASP269 VAL270 GLU271 ASN272 PHE273 ASP274 PHE275 ASP276 PRO277 LEU278 ASP279 ALA280 THR281 LYS282 ASP283 TRP284 PHE285 GLU286 ASP287 VAL288 ILE289 PRO290 PHE291 GLN292 HIS293 VAL294 GLY295 THR296 MET297 THR298 LEU299 ASN300 LYS301 ASN302 VAL303 ASP304 ASN305 TYR306 PHE307 ALA308 GLU309 THR310 GLU311 SER312 VAL313 GLY314 PHE315 ASN316 PRO317 GLY318 VAL319 LEU320 VAL321 PRO322 GLY323 MET324 LEU325 PRO326 SER327 GLU328 ASP329 LYS330 LEU331 LEU332 GLN333 GLY334 ARG335 LEU336 PHE337 SER338 TYR339 SER340 ASP341 THR342 GLN343 ARG344 HIS345 ARG346 ILE347 GLY348 PRO349 ASN350 TYR351 GLN352 GLN353 LEU354 PRO355 ILE356 ASN357 CYS358 PRO359 PHE360 ALA361 GLN362 VAL363 ASN364 ASN365 TYR366 GLN367 ARG368 ASP369 GLY370 ALA371 MET372 PRO373 PHE374 LYS375 GLN376 GLN377 THR378 SER379 SER380 VAL381 ASN382 TYR383 GLU384 PRO385 ASN386 ARG387 TYR388 GLN389 ASP390 GLU391 PRO392 LYS393 GLN394 THR395 PRO396 GLU397 TYR398 THR399 GLU400 ASP401 THR402 GLN403 PRO404 LEU405 HIS406 ASP407 ASP408 ILE409 HIS410 GLY411 ARG412 LEU413 GLU414 ILE415 GLU416 LYS417 THR418 ASN419 ASN420 PHE421 GLY422 GLN423 ALA424 GLY425 GLU426 VAL427 TYR428 ARG429 ARG430 MET431 THR432 GLU433 GLU434 GLU435 GLN436 MET437 ALA438 LEU439 LEU440 ASN441 ASN442 LEU443 VAL444 ASN445 ASP446 LEU447 GLN448 GLN449 VAL450 ARG451 HIS452 GLU453 ASN454 THR455 VAL456 LEU457 LEU458 ALA459 ILE460 CYS461 ASN462 PHE463 TYR464 ARG465 ALA466 ASP467 ALA468 SER469 LEU470 GLY471 GLU472 LYS473 LEU474 SER475 GLU476 ALA477 LEU478 ASN479 VAL480 ASP481 ILE482 LYS483 PRO484 PHE485
Unit 3 LYS6 LYS7 LEU8 THR9 THR10 ASN11 GLN12 GLY13 VAL14 PRO15 ILE16 GLY17 ASP18 ASN19 GLN20 ASN21 SER22 ARG23 THR24 ALA25 GLY26 ARG27 ARG28 GLY29 PRO30 THR31 LEU32 LEU33 GLU34 ASP35 TYR36 GLN37 LEU38 ILE39 GLU40 LYS41 ILE42 ALA43 HIS44 PHE45 ASP46 ARG47 GLU48 ARG49 VAL50 PRO51 GLU52 ARG53 VAL54 VAL55 HIS56 ALA57 ARG58 GLY59 PHE60 GLY61 ALA62 HIS63 GLY64 VAL65 PHE66 LYS67 VAL68 LYS69 ASN70 SER71 MET72 LYS73 LYS74 TYR75 THR76 LYS77 ALA78 ALA79 PHE80 LEU81 GLN82 GLU83 GLU84 GLY85 THR86 GLU87 VAL88 PRO89 VAL90 PHE91 ALA92 ARG93 PHE94 SER95 THR96 VAL97 ILE98 HIS99 GLY100 THR101 HIS102 SER103 PRO104 GLU105 THR106 LEU107 ARG108 ASP109 PRO110 ARG111 GLY112 PHE113 SER114 VAL115 LYS116 PHE117 TYR118 THR119 GLU120 GLU121 GLY122 ASN123 TRP124 ASP125 PHE126 VAL127 GLY128 ASN129 ASN130 LEU131 PRO132 VAL133 PHE134 PHE135 ILE136 ARG137 ASP138 ALA139 MET140 LYS141 PHE142 PRO143 ASP144 MET145 VAL146 HIS147 SER148 LEU149 LYS150 PRO151 ASP152 PRO153 ARG154 THR155 ASN156 ILE157 GLN158 ASP159 PRO160 ASP161 ARG162 TYR163 TRP164 ASP165 PHE166 MET167 THR168 LEU169 ARG170 PRO171 GLU172 SER173 THR174 ASN175 MET176 LEU177 MET178 HIS179 ILE180 PHE181 THR182 ASP183 GLU184 GLY185 ILE186 PRO187 ALA188 SER189 TYR190 ARG191 LYS192 MET193 ARG194 GLY195 SER196 SER197 VAL198 HIS199 SER200 PHE201 LYS202 TRP203 VAL204 ASN205 ALA206 HIS207 GLY208 ASN209 THR210 VAL211 TYR212 ILE213 LYS214 LEU215 ARG216 TRP217 VAL218 PRO219 LYS220 GLU221 GLY222 VAL223 HIS224 ASN225 LEU226 SER227 ALA228 ASP229 GLU230 ALA231 THR232 GLU233 VAL234 GLN235 GLY236 LYS237 ASP238 PHE239 ASN240 HIS241 ALA242 SER243 ASN244 ASP245 THR246 PHE247 GLN248 ALA249 ILE250 GLU251 ASN252 GLY253 ASP254 PHE255 PRO256 GLU257 TRP258 ASP259 LEU260 PHE261 VAL262 GLN263 VAL264 LEU265 ASP266 PRO267 ALA268 ASP269 VAL270 GLU271 ASN272 PHE273 ASP274 PHE275 ASP276 PRO277 LEU278 ASP279 ALA280 THR281 LYS282 ASP283 TRP284 PHE285 GLU286 ASP287 VAL288 ILE289 PRO290 PHE291 GLN292 HIS293 VAL294 GLY295 THR296 MET297 THR298 LEU299 ASN300 LYS301 ASN302 VAL303 ASP304 ASN305 TYR306 PHE307 ALA308 GLU309 THR310 GLU311 SER312 VAL313 GLY314 PHE315 ASN316 PRO317 GLY318 VAL319 LEU320 VAL321 PRO322 GLY323 MET324 LEU325 PRO326 SER327 GLU328 ASP329 LYS330 LEU331 LEU332 GLN333 GLY334 ARG335 LEU336 PHE337 SER338 TYR339 SER340 ASP341 THR342 GLN343 ARG344 HIS345 ARG346 ILE347 GLY348 PRO349 ASN350 TYR351 GLN352 GLN353 LEU354 PRO355 ILE356 ASN357 CYS358 PRO359 PHE360 ALA361 GLN362 VAL363 ASN364 ASN365 TYR366 GLN367 ARG368 ASP369 GLY370 ALA371 MET372 PRO373 PHE374 LYS375 GLN376 GLN377 THR378 SER379 SER380 VAL381 ASN382 TYR383 GLU384 PRO385 ASN386 ARG387 TYR388 GLN389 ASP390 GLU391 PRO392 LYS393 GLN394 THR395 PRO396 GLU397 TYR398 THR399 GLU400 ASP401 THR402 GLN403 PRO404 LEU405 HIS406 ASP407 ASP408 ILE409 HIS410 GLY411 ARG412 LEU413 GLU414 ILE415 GLU416 LYS417 THR418 ASN419 ASN420 PHE421 GLY422 GLN423 ALA424 GLY425 GLU426 VAL427 TYR428 ARG429 ARG430 MET431 THR432 GLU433 GLU434 GLU435 GLN436 MET437 ALA438 LEU439 LEU440 ASN441 ASN442 LEU443 VAL444 ASN445 ASP446 LEU447 GLN448 GLN449 VAL450 ARG451 HIS452 GLU453 ASN454 THR455 VAL456 LEU457 LEU458 ALA459 ILE460 CYS461 ASN462 PHE463 TYR464 ARG465 ALA466 ASP467 ALA468 SER469 LEU470 GLY471 GLU472 LYS473 LEU474 SER475 GLU476 ALA477 LEU478 ASN479 VAL480 ASP481 ILE482 LYS483 PRO484 PHE485
Unit 4 LYS6 LYS7 LEU8 THR9 THR10 ASN11 GLN12 GLY13 VAL14 PRO15 ILE16 GLY17 ASP18 ASN19 GLN20 ASN21 SER22 ARG23 THR24 ALA25 GLY26 ARG27 ARG28 GLY29 PRO30 THR31 LEU32 LEU33 GLU34 ASP35 TYR36 GLN37 LEU38 ILE39 GLU40 LYS41 ILE42 ALA43 HIS44 PHE45 ASP46 ARG47 GLU48 ARG49 VAL50 PRO51 GLU52 ARG53 VAL54 VAL55 HIS56 ALA57 ARG58 GLY59 PHE60 GLY61 ALA62 HIS63 GLY64 VAL65 PHE66 LYS67 VAL68 LYS69 ASN70 SER71 MET72 LYS73 LYS74 TYR75 THR76 LYS77 ALA78 ALA79 PHE80 LEU81 GLN82 GLU83 GLU84 GLY85 THR86 GLU87 VAL88 PRO89 VAL90 PHE91 ALA92 ARG93 PHE94 SER95 THR96 VAL97 ILE98 HIS99 GLY100 THR101 HIS102 SER103 PRO104 GLU105 THR106 LEU107 ARG108 ASP109 PRO110 ARG111 GLY112 PHE113 SER114 VAL115 LYS116 PHE117 TYR118 THR119 GLU120 GLU121 GLY122 ASN123 TRP124 ASP125 PHE126 VAL127 GLY128 ASN129 ASN130 LEU131 PRO132 VAL133 PHE134 PHE135 ILE136 ARG137 ASP138 ALA139 MET140 LYS141 PHE142 PRO143 ASP144 MET145 VAL146 HIS147 SER148 LEU149 LYS150 PRO151 ASP152 PRO153 ARG154 THR155 ASN156 ILE157 GLN158 ASP159 PRO160 ASP161 ARG162 TYR163 TRP164 ASP165 PHE166 MET167 THR168 LEU169 ARG170 PRO171 GLU172 SER173 THR174 ASN175 MET176 LEU177 MET178 HIS179 ILE180 PHE181 THR182 ASP183 GLU184 GLY185 ILE186 PRO187 ALA188 SER189 TYR190 ARG191 LYS192 MET193 ARG194 GLY195 SER196 SER197 VAL198 HIS199 SER200 PHE201 LYS202 TRP203 VAL204 ASN205 ALA206 HIS207 GLY208 ASN209 THR210 VAL211 TYR212 ILE213 LYS214 LEU215 ARG216 TRP217 VAL218 PRO219 LYS220 GLU221 GLY222 VAL223 HIS224 ASN225 LEU226 SER227 ALA228 ASP229 GLU230 ALA231 THR232 GLU233 VAL234 GLN235 GLY236 LYS237 ASP238 PHE239 ASN240 HIS241 ALA242 SER243 ASN244 ASP245 THR246 PHE247 GLN248 ALA249 ILE250 GLU251 ASN252 GLY253 ASP254 PHE255 PRO256 GLU257 TRP258 ASP259 LEU260 PHE261 VAL262 GLN263 VAL264 LEU265 ASP266 PRO267 ALA268 ASP269 VAL270 GLU271 ASN272 PHE273 ASP274 PHE275 ASP276 PRO277 LEU278 ASP279 ALA280 THR281 LYS282 ASP283 TRP284 PHE285 GLU286 ASP287 VAL288 ILE289 PRO290 PHE291 GLN292 HIS293 VAL294 GLY295 THR296 MET297 THR298 LEU299 ASN300 LYS301 ASN302 VAL303 ASP304 ASN305 TYR306 PHE307 ALA308 GLU309 THR310 GLU311 SER312 VAL313 GLY314 PHE315 ASN316 PRO317 GLY318 VAL319 LEU320 VAL321 PRO322 GLY323 MET324 LEU325 PRO326 SER327 GLU328 ASP329 LYS330 LEU331 LEU332 GLN333 GLY334 ARG335 LEU336 PHE337 SER338 TYR339 SER340 ASP341 THR342 GLN343 ARG344 HIS345 ARG346 ILE347 GLY348 PRO349 ASN350 TYR351 GLN352 GLN353 LEU354 PRO355 ILE356 ASN357 CYS358 PRO359 PHE360 ALA361 GLN362 VAL363 ASN364 ASN365 TYR366 GLN367 ARG368 ASP369 GLY370 ALA371 MET372 PRO373 PHE374 LYS375 GLN376 GLN377 THR378 SER379 SER380 VAL381 ASN382 TYR383 GLU384 PRO385 ASN386 ARG387 TYR388 GLN389 ASP390 GLU391 PRO392 LYS393 GLN394 THR395 PRO396 GLU397 TYR398 THR399 GLU400 ASP401 THR402 GLN403 PRO404 LEU405 HIS406 ASP407 ASP408 ILE409 HIS410 GLY411 ARG412 LEU413 GLU414 ILE415 GLU416 LYS417 THR418 ASN419 ASN420 PHE421 GLY422 GLN423 ALA424 GLY425 GLU426 VAL427 TYR428 ARG429 ARG430 MET431 THR432 GLU433 GLU434 GLU435 GLN436 MET437 ALA438 LEU439 LEU440 ASN441 ASN442 LEU443 VAL444 ASN445 ASP446 LEU447 GLN448 GLN449 VAL450 ARG451 HIS452 GLU453 ASN454 THR455 VAL456 LEU457 LEU458 ALA459 ILE460 CYS461 ASN462 PHE463 TYR464 ARG465 ALA466 ASP467 ALA468 SER469 LEU470 GLY471 GLU472 LYS473 LEU474 SER475 GLU476 ALA477 LEU478 ASN479 VAL480 ASP481 ILE482 LYS483 PRO484 PHE485
Ligands
Unit 5 HEM501
Unit 6 HEM501
Unit 7 HEM501
Unit 8 HEM501
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany