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| Title | STRUCTURAL BASIS FOR NON-COMPETITIVE PRODUCT INHIBITION IN HUMAN THYMIDINE PHOSPHORYLASE: IMPLICATION FOR DRUG DESIGN | |
| Keywords | HTP, CHEMOTAXIS, TRANSFERASE, POLYMORPHISM, DISEASE MUTATION, GLYCOSYLTRANSFERASE, ANGIOGENESIS, GROWTH FACTOR, DIFFERENTIATION, DEVELOPMENTAL PROTEIN, HUMAN THYMIDINE PHOSPHORYLASE | |
| Experiment | X-ray diffraction | |
| Number of Models | 1 |
| Database | ID code | Status | Coordinate files | ||
| Header | Asymmetric unit | Biological unit | |||
| PDB | 2J0F | released | available | available | Quaternary Structure Server |
| Unit | Type | Name | Chain ID | Residues | Atoms | Hetatoms |
|---|---|---|---|---|---|---|
| 1 | Protein | THYMIDINE PHOSPHORYLASE | A | 446 | 3259 | 0 |
| 2 | Protein | THYMIDINE PHOSPHORYLASE | B | 446 | 3259 | 0 |
| 3 | Protein | THYMIDINE PHOSPHORYLASE | C | 446 | 3259 | 0 |
| 4 | Protein | THYMIDINE PHOSPHORYLASE | D | 446 | 3259 | 0 |
| 5 | Ligand | THYMIDINE PHOSPHORYLASE | A | 1 | 0 | 9 |
| 6 | Ligand | THYMIDINE PHOSPHORYLASE | B | 1 | 0 | 9 |
| 7 | Ligand | THYMIDINE PHOSPHORYLASE | C | 1 | 0 | 9 |
| 8 | Water | 450 | 0 | 450 | ||
| total | 2237 | 13036 | 477 |
| Unit 1 | LYS34 GLN35 LEU36 PRO37 GLU38 LEU39 ILE40 ARG41 MET42 LYS43 ARG44 ASP45 GLY46 GLY47 ARG48 LEU49 SER50 GLU51 ALA52 ASP53 ILE54 ARG55 GLY56 PHE57 VAL58 ALA59 ALA60 VAL61 VAL62 ASN63 GLY64 SER65 ALA66 GLN67 GLY68 ALA69 GLN70 ILE71 GLY72 ALA73 MET74 LEU75 MET76 ALA77 ILE78 ARG79 LEU80 ARG81 GLY82 MET83 ASP84 LEU85 GLU86 GLU87 THR88 SER89 VAL90 LEU91 THR92 GLN93 ALA94 LEU95 ALA96 GLN97 SER98 GLY99 GLN100 GLN101 LEU102 GLU103 TRP104 PRO105 GLU106 ALA107 TRP108 ARG109 GLN110 GLN111 LEU112 VAL113 ASP114 LYS115 HIS116 SER117 THR118 GLY119 GLY120 VAL121 GLY122 ASP123 LYS124 VAL125 SER126 LEU127 VAL128 LEU129 ALA130 PRO131 ALA132 LEU133 ALA134 ALA135 CYS136 GLY137 CYS138 LYS139 VAL140 PRO141 MET142 ILE143 SER144 GLY145 ARG146 GLY147 LEU148 GLY149 HIS150 THR151 GLY152 GLY153 THR154 LEU155 ASP156 LYS157 LEU158 GLU159 SER160 ILE161 PRO162 GLY163 PHE164 ASN165 VAL166 ILE167 GLN168 SER169 PRO170 GLU171 GLN172 MET173 GLN174 VAL175 LEU176 LEU177 ASP178 GLN179 ALA180 GLY181 CYS182 CYS183 ILE184 VAL185 GLY186 GLN187 SER188 GLU189 GLN190 LEU191 VAL192 PRO193 ALA194 ASP195 GLY196 ILE197 LEU198 TYR199 ALA200 ALA201 ARG202 ASP203 VAL204 THR205 ALA206 THR207 VAL208 ASP209 SER210 LEU211 PRO212 LEU213 ILE214 THR215 ALA216 SER217 ILE218 LEU219 SER220 LYS221 LYS222 LEU223 VAL224 GLU225 GLY226 LEU227 SER228 ALA229 LEU230 VAL231 VAL232 ASP233 VAL234 LYS235 PHE236 GLY237 ALA238 GLY239 ALA240 VAL241 PHE242 PRO243 ASN244 GLN245 GLU246 GLN247 ALA248 ARG249 GLU250 LEU251 ALA252 LYS253 THR254 LEU255 VAL256 GLY257 VAL258 GLY259 ALA260 SER261 LEU262 GLY263 LEU264 ARG265 VAL266 ALA267 ALA268 ALA269 LEU270 THR271 ALA272 MET273 ASP274 LYS275 PRO276 LEU277 GLY278 ARG279 CYS280 VAL281 GLY282 HIS283 ALA284 LEU285 GLU286 VAL287 GLU288 GLU289 ALA290 LEU291 LEU292 CYS293 MET294 ASP295 GLY296 ALA297 GLY298 PRO299 PRO300 ASP301 LEU302 ARG303 ASP304 LEU305 VAL306 THR307 THR308 LEU309 GLY310 GLY311 ALA312 LEU313 LEU314 TRP315 LEU316 SER317 GLY318 HIS319 ALA320 GLY321 THR322 GLN323 ALA324 GLN325 GLY326 ALA327 ALA328 ARG329 VAL330 ALA331 ALA332 ALA333 LEU334 ASP335 ASP336 GLY337 SER338 ALA339 LEU340 GLY341 ARG342 PHE343 GLU344 ARG345 MET346 LEU347 ALA348 ALA349 GLN350 GLY351 VAL352 ASP353 PRO354 GLY355 LEU356 ALA357 ARG358 ALA359 LEU360 CYS361 SER362 GLY363 SER364 PRO365 ALA366 GLU367 ARG368 ARG369 GLN370 LEU371 LEU372 PRO373 ARG374 ALA375 ARG376 GLU377 GLN378 GLU379 GLU380 LEU381 LEU382 ALA383 PRO384 ALA385 ASP386 GLY387 THR388 VAL389 GLU390 LEU391 VAL392 ARG393 ALA394 LEU395 PRO396 LEU397 ALA398 LEU399 VAL400 LEU401 HIS402 GLU403 LEU404 GLY405 ALA406 GLY407 ARG408 SER409 ARG410 ALA411 GLY412 GLU413 PRO414 LEU415 ARG416 LEU417 GLY418 VAL419 GLY420 ALA421 GLU422 LEU423 LEU424 VAL425 ASP426 VAL427 GLY428 GLN429 ARG430 LEU431 ARG432 ARG433 GLY434 THR435 PRO436 TRP437 LEU438 ARG439 VAL440 HIS441 ARG442 ASP443 GLY444 PRO445 ALA446 LEU447 SER448 GLY449 PRO450 GLN451 SER452 ARG453 ALA454 LEU455 GLN456 GLU457 ALA458 LEU459 VAL460 LEU461 SER462 ASP463 ARG464 ALA465 PRO466 PHE467 ALA468 ALA469 PRO470 LEU471 PRO472 PHE473 ALA474 GLU475 LEU476 VAL477 LEU478 PRO479 |
| Unit 2 | LYS34 GLN35 LEU36 PRO37 GLU38 LEU39 ILE40 ARG41 MET42 LYS43 ARG44 ASP45 GLY46 GLY47 ARG48 LEU49 SER50 GLU51 ALA52 ASP53 ILE54 ARG55 GLY56 PHE57 VAL58 ALA59 ALA60 VAL61 VAL62 ASN63 GLY64 SER65 ALA66 GLN67 GLY68 ALA69 GLN70 ILE71 GLY72 ALA73 MET74 LEU75 MET76 ALA77 ILE78 ARG79 LEU80 ARG81 GLY82 MET83 ASP84 LEU85 GLU86 GLU87 THR88 SER89 VAL90 LEU91 THR92 GLN93 ALA94 LEU95 ALA96 GLN97 SER98 GLY99 GLN100 GLN101 LEU102 GLU103 TRP104 PRO105 GLU106 ALA107 TRP108 ARG109 GLN110 GLN111 LEU112 VAL113 ASP114 LYS115 HIS116 SER117 THR118 GLY119 GLY120 VAL121 GLY122 ASP123 LYS124 VAL125 SER126 LEU127 VAL128 LEU129 ALA130 PRO131 ALA132 LEU133 ALA134 ALA135 CYS136 GLY137 CYS138 LYS139 VAL140 PRO141 MET142 ILE143 SER144 GLY145 ARG146 GLY147 LEU148 GLY149 HIS150 THR151 GLY152 GLY153 THR154 LEU155 ASP156 LYS157 LEU158 GLU159 SER160 ILE161 PRO162 GLY163 PHE164 ASN165 VAL166 ILE167 GLN168 SER169 PRO170 GLU171 GLN172 MET173 GLN174 VAL175 LEU176 LEU177 ASP178 GLN179 ALA180 GLY181 CYS182 CYS183 ILE184 VAL185 GLY186 GLN187 SER188 GLU189 GLN190 LEU191 VAL192 PRO193 ALA194 ASP195 GLY196 ILE197 LEU198 TYR199 ALA200 ALA201 ARG202 ASP203 VAL204 THR205 ALA206 THR207 VAL208 ASP209 SER210 LEU211 PRO212 LEU213 ILE214 THR215 ALA216 SER217 ILE218 LEU219 SER220 LYS221 LYS222 LEU223 VAL224 GLU225 GLY226 LEU227 SER228 ALA229 LEU230 VAL231 VAL232 ASP233 VAL234 LYS235 PHE236 GLY237 ALA238 GLY239 ALA240 VAL241 PHE242 PRO243 ASN244 GLN245 GLU246 GLN247 ALA248 ARG249 GLU250 LEU251 ALA252 LYS253 THR254 LEU255 VAL256 GLY257 VAL258 GLY259 ALA260 SER261 LEU262 GLY263 LEU264 ARG265 VAL266 ALA267 ALA268 ALA269 LEU270 THR271 ALA272 MET273 ASP274 LYS275 PRO276 LEU277 GLY278 ARG279 CYS280 VAL281 GLY282 HIS283 ALA284 LEU285 GLU286 VAL287 GLU288 GLU289 ALA290 LEU291 LEU292 CYS293 MET294 ASP295 GLY296 ALA297 GLY298 PRO299 PRO300 ASP301 LEU302 ARG303 ASP304 LEU305 VAL306 THR307 THR308 LEU309 GLY310 GLY311 ALA312 LEU313 LEU314 TRP315 LEU316 SER317 GLY318 HIS319 ALA320 GLY321 THR322 GLN323 ALA324 GLN325 GLY326 ALA327 ALA328 ARG329 VAL330 ALA331 ALA332 ALA333 LEU334 ASP335 ASP336 GLY337 SER338 ALA339 LEU340 GLY341 ARG342 PHE343 GLU344 ARG345 MET346 LEU347 ALA348 ALA349 GLN350 GLY351 VAL352 ASP353 PRO354 GLY355 LEU356 ALA357 ARG358 ALA359 LEU360 CYS361 SER362 GLY363 SER364 PRO365 ALA366 GLU367 ARG368 ARG369 GLN370 LEU371 LEU372 PRO373 ARG374 ALA375 ARG376 GLU377 GLN378 GLU379 GLU380 LEU381 LEU382 ALA383 PRO384 ALA385 ASP386 GLY387 THR388 VAL389 GLU390 LEU391 VAL392 ARG393 ALA394 LEU395 PRO396 LEU397 ALA398 LEU399 VAL400 LEU401 HIS402 GLU403 LEU404 GLY405 ALA406 GLY407 ARG408 SER409 ARG410 ALA411 GLY412 GLU413 PRO414 LEU415 ARG416 LEU417 GLY418 VAL419 GLY420 ALA421 GLU422 LEU423 LEU424 VAL425 ASP426 VAL427 GLY428 GLN429 ARG430 LEU431 ARG432 ARG433 GLY434 THR435 PRO436 TRP437 LEU438 ARG439 VAL440 HIS441 ARG442 ASP443 GLY444 PRO445 ALA446 LEU447 SER448 GLY449 PRO450 GLN451 SER452 ARG453 ALA454 LEU455 GLN456 GLU457 ALA458 LEU459 VAL460 LEU461 SER462 ASP463 ARG464 ALA465 PRO466 PHE467 ALA468 ALA469 PRO470 LEU471 PRO472 PHE473 ALA474 GLU475 LEU476 VAL477 LEU478 PRO479 |
| Unit 3 | LYS34 GLN35 LEU36 PRO37 GLU38 LEU39 ILE40 ARG41 MET42 LYS43 ARG44 ASP45 GLY46 GLY47 ARG48 LEU49 SER50 GLU51 ALA52 ASP53 ILE54 ARG55 GLY56 PHE57 VAL58 ALA59 ALA60 VAL61 VAL62 ASN63 GLY64 SER65 ALA66 GLN67 GLY68 ALA69 GLN70 ILE71 GLY72 ALA73 MET74 LEU75 MET76 ALA77 ILE78 ARG79 LEU80 ARG81 GLY82 MET83 ASP84 LEU85 GLU86 GLU87 THR88 SER89 VAL90 LEU91 THR92 GLN93 ALA94 LEU95 ALA96 GLN97 SER98 GLY99 GLN100 GLN101 LEU102 GLU103 TRP104 PRO105 GLU106 ALA107 TRP108 ARG109 GLN110 GLN111 LEU112 VAL113 ASP114 LYS115 HIS116 SER117 THR118 GLY119 GLY120 VAL121 GLY122 ASP123 LYS124 VAL125 SER126 LEU127 VAL128 LEU129 ALA130 PRO131 ALA132 LEU133 ALA134 ALA135 CYS136 GLY137 CYS138 LYS139 VAL140 PRO141 MET142 ILE143 SER144 GLY145 ARG146 GLY147 LEU148 GLY149 HIS150 THR151 GLY152 GLY153 THR154 LEU155 ASP156 LYS157 LEU158 GLU159 SER160 ILE161 PRO162 GLY163 PHE164 ASN165 VAL166 ILE167 GLN168 SER169 PRO170 GLU171 GLN172 MET173 GLN174 VAL175 LEU176 LEU177 ASP178 GLN179 ALA180 GLY181 CYS182 CYS183 ILE184 VAL185 GLY186 GLN187 SER188 GLU189 GLN190 LEU191 VAL192 PRO193 ALA194 ASP195 GLY196 ILE197 LEU198 TYR199 ALA200 ALA201 ARG202 ASP203 VAL204 THR205 ALA206 THR207 VAL208 ASP209 SER210 LEU211 PRO212 LEU213 ILE214 THR215 ALA216 SER217 ILE218 LEU219 SER220 LYS221 LYS222 LEU223 VAL224 GLU225 GLY226 LEU227 SER228 ALA229 LEU230 VAL231 VAL232 ASP233 VAL234 LYS235 PHE236 GLY237 ALA238 GLY239 ALA240 VAL241 PHE242 PRO243 ASN244 GLN245 GLU246 GLN247 ALA248 ARG249 GLU250 LEU251 ALA252 LYS253 THR254 LEU255 VAL256 GLY257 VAL258 GLY259 ALA260 SER261 LEU262 GLY263 LEU264 ARG265 VAL266 ALA267 ALA268 ALA269 LEU270 THR271 ALA272 MET273 ASP274 LYS275 PRO276 LEU277 GLY278 ARG279 CYS280 VAL281 GLY282 HIS283 ALA284 LEU285 GLU286 VAL287 GLU288 GLU289 ALA290 LEU291 LEU292 CYS293 MET294 ASP295 GLY296 ALA297 GLY298 PRO299 PRO300 ASP301 LEU302 ARG303 ASP304 LEU305 VAL306 THR307 THR308 LEU309 GLY310 GLY311 ALA312 LEU313 LEU314 TRP315 LEU316 SER317 GLY318 HIS319 ALA320 GLY321 THR322 GLN323 ALA324 GLN325 GLY326 ALA327 ALA328 ARG329 VAL330 ALA331 ALA332 ALA333 LEU334 ASP335 ASP336 GLY337 SER338 ALA339 LEU340 GLY341 ARG342 PHE343 GLU344 ARG345 MET346 LEU347 ALA348 ALA349 GLN350 GLY351 VAL352 ASP353 PRO354 GLY355 LEU356 ALA357 ARG358 ALA359 LEU360 CYS361 SER362 GLY363 SER364 PRO365 ALA366 GLU367 ARG368 ARG369 GLN370 LEU371 LEU372 PRO373 ARG374 ALA375 ARG376 GLU377 GLN378 GLU379 GLU380 LEU381 LEU382 ALA383 PRO384 ALA385 ASP386 GLY387 THR388 VAL389 GLU390 LEU391 VAL392 ARG393 ALA394 LEU395 PRO396 LEU397 ALA398 LEU399 VAL400 LEU401 HIS402 GLU403 LEU404 GLY405 ALA406 GLY407 ARG408 SER409 ARG410 ALA411 GLY412 GLU413 PRO414 LEU415 ARG416 LEU417 GLY418 VAL419 GLY420 ALA421 GLU422 LEU423 LEU424 VAL425 ASP426 VAL427 GLY428 GLN429 ARG430 LEU431 ARG432 ARG433 GLY434 THR435 PRO436 TRP437 LEU438 ARG439 VAL440 HIS441 ARG442 ASP443 GLY444 PRO445 ALA446 LEU447 SER448 GLY449 PRO450 GLN451 SER452 ARG453 ALA454 LEU455 GLN456 GLU457 ALA458 LEU459 VAL460 LEU461 SER462 ASP463 ARG464 ALA465 PRO466 PHE467 ALA468 ALA469 PRO470 LEU471 PRO472 PHE473 ALA474 GLU475 LEU476 VAL477 LEU478 PRO479 |
| Unit 4 | LYS34 GLN35 LEU36 PRO37 GLU38 LEU39 ILE40 ARG41 MET42 LYS43 ARG44 ASP45 GLY46 GLY47 ARG48 LEU49 SER50 GLU51 ALA52 ASP53 ILE54 ARG55 GLY56 PHE57 VAL58 ALA59 ALA60 VAL61 VAL62 ASN63 GLY64 SER65 ALA66 GLN67 GLY68 ALA69 GLN70 ILE71 GLY72 ALA73 MET74 LEU75 MET76 ALA77 ILE78 ARG79 LEU80 ARG81 GLY82 MET83 ASP84 LEU85 GLU86 GLU87 THR88 SER89 VAL90 LEU91 THR92 GLN93 ALA94 LEU95 ALA96 GLN97 SER98 GLY99 GLN100 GLN101 LEU102 GLU103 TRP104 PRO105 GLU106 ALA107 TRP108 ARG109 GLN110 GLN111 LEU112 VAL113 ASP114 LYS115 HIS116 SER117 THR118 GLY119 GLY120 VAL121 GLY122 ASP123 LYS124 VAL125 SER126 LEU127 VAL128 LEU129 ALA130 PRO131 ALA132 LEU133 ALA134 ALA135 CYS136 GLY137 CYS138 LYS139 VAL140 PRO141 MET142 ILE143 SER144 GLY145 ARG146 GLY147 LEU148 GLY149 HIS150 THR151 GLY152 GLY153 THR154 LEU155 ASP156 LYS157 LEU158 GLU159 SER160 ILE161 PRO162 GLY163 PHE164 ASN165 VAL166 ILE167 GLN168 SER169 PRO170 GLU171 GLN172 MET173 GLN174 VAL175 LEU176 LEU177 ASP178 GLN179 ALA180 GLY181 CYS182 CYS183 ILE184 VAL185 GLY186 GLN187 SER188 GLU189 GLN190 LEU191 VAL192 PRO193 ALA194 ASP195 GLY196 ILE197 LEU198 TYR199 ALA200 ALA201 ARG202 ASP203 VAL204 THR205 ALA206 THR207 VAL208 ASP209 SER210 LEU211 PRO212 LEU213 ILE214 THR215 ALA216 SER217 ILE218 LEU219 SER220 LYS221 LYS222 LEU223 VAL224 GLU225 GLY226 LEU227 SER228 ALA229 LEU230 VAL231 VAL232 ASP233 VAL234 LYS235 PHE236 GLY237 ALA238 GLY239 ALA240 VAL241 PHE242 PRO243 ASN244 GLN245 GLU246 GLN247 ALA248 ARG249 GLU250 LEU251 ALA252 LYS253 THR254 LEU255 VAL256 GLY257 VAL258 GLY259 ALA260 SER261 LEU262 GLY263 LEU264 ARG265 VAL266 ALA267 ALA268 ALA269 LEU270 THR271 ALA272 MET273 ASP274 LYS275 PRO276 LEU277 GLY278 ARG279 CYS280 VAL281 GLY282 HIS283 ALA284 LEU285 GLU286 VAL287 GLU288 GLU289 ALA290 LEU291 LEU292 CYS293 MET294 ASP295 GLY296 ALA297 GLY298 PRO299 PRO300 ASP301 LEU302 ARG303 ASP304 LEU305 VAL306 THR307 THR308 LEU309 GLY310 GLY311 ALA312 LEU313 LEU314 TRP315 LEU316 SER317 GLY318 HIS319 ALA320 GLY321 THR322 GLN323 ALA324 GLN325 GLY326 ALA327 ALA328 ARG329 VAL330 ALA331 ALA332 ALA333 LEU334 ASP335 ASP336 GLY337 SER338 ALA339 LEU340 GLY341 ARG342 PHE343 GLU344 ARG345 MET346 LEU347 ALA348 ALA349 GLN350 GLY351 VAL352 ASP353 PRO354 GLY355 LEU356 ALA357 ARG358 ALA359 LEU360 CYS361 SER362 GLY363 SER364 PRO365 ALA366 GLU367 ARG368 ARG369 GLN370 LEU371 LEU372 PRO373 ARG374 ALA375 ARG376 GLU377 GLN378 GLU379 GLU380 LEU381 LEU382 ALA383 PRO384 ALA385 ASP386 GLY387 THR388 VAL389 GLU390 LEU391 VAL392 ARG393 ALA394 LEU395 PRO396 LEU397 ALA398 LEU399 VAL400 LEU401 HIS402 GLU403 LEU404 GLY405 ALA406 GLY407 ARG408 SER409 ARG410 ALA411 GLY412 GLU413 PRO414 LEU415 ARG416 LEU417 GLY418 VAL419 GLY420 ALA421 GLU422 LEU423 LEU424 VAL425 ASP426 VAL427 GLY428 GLN429 ARG430 LEU431 ARG432 ARG433 GLY434 THR435 PRO436 TRP437 LEU438 ARG439 VAL440 HIS441 ARG442 ASP443 GLY444 PRO445 ALA446 LEU447 SER448 GLY449 PRO450 GLN451 SER452 ARG453 ALA454 LEU455 GLN456 GLU457 ALA458 LEU459 VAL460 LEU461 SER462 ASP463 ARG464 ALA465 PRO466 PHE467 ALA468 ALA469 PRO470 LEU471 PRO472 PHE473 ALA474 GLU475 LEU476 VAL477 LEU478 PRO479 |
| Unit 5 | TDR1480 |
| Unit 6 | TDR1480 |
| Unit 7 | TDR1480 |
| Perl script: | PDBscan.pl (15 Sep 2016) |
| Author: | Peter Slickers (slickers@leibniz-fli.de), IMB Jena, Germany |