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Sequence, Chains, Asymmetric and Biological Units

Title COMPLEX BETWEEN THE PRYSPRY DOMAIN OF TRIM21 AND IGG FC
Keywords ZINC, RNA-BINDING, ZINC-FINGER, DNA-BINDING, RIBONUCLEOPROTE IMMUNOGLOBULIN DOMAIN, IMMUNOGLOBULIN C REGION, SYSTEMIC LU ERYTHEMATOSUS, POLYMORPHISM, GLYCOPROTEIN, METAL-BINDING
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   2IWG     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   IG GAMMA-1 CHAIN C  A 207 1658 0
2  Protein   52 KDA RO PROTEIN  B 181 1455 0
3  Protein   IG GAMMA-1 CHAIN C  D 207 1658 0
4  Protein   52 KDA RO PROTEIN  E 181 1455 0
5  Ligand    C 7 0 86
6  Ligand    F 7 0 86
7  Ligand   IG GAMMA-1 CHAIN C  A 1 0 10
8  Ligand   IG GAMMA-1 CHAIN C  D 1 0 10
9 Water     172 0 172
total       964 6226 364

Proteins
Unit 1 GLY237 PRO238 SER239 VAL240 PHE241 LEU242 PHE243 PRO244 PRO245 LYS246 PRO247 LYS248 ASP249 THR250 LEU251 MET252 ILE253 SER254 ARG255 THR256 PRO257 GLU258 VAL259 THR260 CYS261 VAL262 VAL263 VAL264 ASP265 VAL266 SER267 HIS268 GLU269 ASP270 PRO271 GLU272 VAL273 LYS274 PHE275 ASN276 TRP277 TYR278 VAL279 ASP280 GLY281 VAL282 GLU283 VAL284 HIS285 ASN286 ALA287 LYS288 THR289 LYS290 PRO291 ARG292 GLU293 GLU294 GLN295 TYR296 ASN297 SER298 THR299 TYR300 ARG301 VAL302 VAL303 SER304 VAL305 LEU306 THR307 VAL308 LEU309 HIS310 GLN311 ASP312 TRP313 LEU314 ASN315 GLY316 LYS317 GLU318 TYR319 LYS320 CYS321 LYS322 VAL323 SER324 ASN325 LYS326 ALA327 LEU328 PRO329 ALA330 PRO331 ILE332 GLU333 LYS334 THR335 ILE336 SER337 LYS338 ALA339 LYS340 GLY341 GLN342 PRO343 ARG344 GLU345 PRO346 GLN347 VAL348 TYR349 THR350 LEU351 PRO352 PRO353 SER354 ARG355 ASP356 GLU357 LEU358 THR359 LYS360 ASN361 GLN362 VAL363 SER364 LEU365 THR366 CYS367 LEU368 VAL369 LYS370 GLY371 PHE372 TYR373 PRO374 SER375 ASP376 ILE377 ALA378 VAL379 GLU380 TRP381 GLU382 SER383 ASN384 GLY385 GLN386 PRO387 GLU388 ASN389 ASN390 TYR391 LYS392 THR393 THR394 PRO395 PRO396 VAL397 LEU398 ASP399 SER400 ASP401 GLY402 SER403 PHE404 PHE405 LEU406 TYR407 SER408 LYS409 LEU410 THR411 VAL412 ASP413 LYS414 SER415 ARG416 TRP417 GLN418 GLN419 GLY420 ASN421 VAL422 PHE423 SER424 CYS425 SER426 VAL427 MET428 HIS429 GLU430 ALA431 LEU432 HIS433 ASN434 HIS435 TYR436 THR437 GLN438 LYS439 SER440 LEU441 SER442 LEU443
Unit 2 HIS2 MET3 VAL4 HIS5 ILE6 THR7 LEU8 ASP9 PRO10 ASP11 THR12 ALA13 ASN14 PRO15 TRP16 LEU17 ILE18 LEU19 SER20 GLU21 ASP22 ARG23 ARG24 GLN25 VAL26 ARG27 LEU28 GLY29 ASP30 THR31 GLN32 GLN33 SER34 ILE35 PRO36 GLY37 ASN38 GLU39 GLU40 ARG41 PHE42 ASP43 SER44 TYR45 PRO46 MET47 VAL48 LEU49 GLY50 ALA51 GLN52 HIS53 PHE54 HIS55 SER56 GLY57 LYS58 HIS59 TYR60 TRP61 GLU62 VAL63 ASP64 VAL65 THR66 GLY67 LYS68 GLU69 ALA70 TRP71 ASP72 LEU73 GLY74 VAL75 CYS76 ARG77 ASP78 SER79 VAL80 ARG81 ARG82 LYS83 GLY84 HIS85 PHE86 LEU87 LEU88 SER89 SER90 LYS91 SER92 GLY93 PHE94 TRP95 THR96 ILE97 TRP98 LEU99 TRP100 ASN101 LYS102 GLN103 LYS104 TYR105 GLU106 ALA107 GLY108 THR109 TYR110 PRO111 GLN112 THR113 PRO114 LEU115 HIS116 LEU117 GLN118 VAL119 PRO120 PRO121 CYS122 GLN123 VAL124 GLY125 ILE126 PHE127 LEU128 ASP129 TYR130 GLU131 ALA132 GLY133 MET134 VAL135 SER136 PHE137 TYR138 ASN139 ILE140 THR141 ASP142 HIS143 GLY144 SER145 LEU146 ILE147 TYR148 SER149 PHE150 SER151 GLU152 CYS153 ALA154 PHE155 THR156 GLY157 PRO158 LEU159 ARG160 PRO161 PHE162 PHE163 SER164 PRO165 GLY166 PHE167 ASN168 ASP169 GLY170 GLY171 LYS172 ASN173 THR174 ALA175 PRO176 LEU177 THR178 LEU179 CYS180 PRO181 LEU182
Unit 3 GLY237 PRO238 SER239 VAL240 PHE241 LEU242 PHE243 PRO244 PRO245 LYS246 PRO247 LYS248 ASP249 THR250 LEU251 MET252 ILE253 SER254 ARG255 THR256 PRO257 GLU258 VAL259 THR260 CYS261 VAL262 VAL263 VAL264 ASP265 VAL266 SER267 HIS268 GLU269 ASP270 PRO271 GLU272 VAL273 LYS274 PHE275 ASN276 TRP277 TYR278 VAL279 ASP280 GLY281 VAL282 GLU283 VAL284 HIS285 ASN286 ALA287 LYS288 THR289 LYS290 PRO291 ARG292 GLU293 GLU294 GLN295 TYR296 ASN297 SER298 THR299 TYR300 ARG301 VAL302 VAL303 SER304 VAL305 LEU306 THR307 VAL308 LEU309 HIS310 GLN311 ASP312 TRP313 LEU314 ASN315 GLY316 LYS317 GLU318 TYR319 LYS320 CYS321 LYS322 VAL323 SER324 ASN325 LYS326 ALA327 LEU328 PRO329 ALA330 PRO331 ILE332 GLU333 LYS334 THR335 ILE336 SER337 LYS338 ALA339 LYS340 GLY341 GLN342 PRO343 ARG344 GLU345 PRO346 GLN347 VAL348 TYR349 THR350 LEU351 PRO352 PRO353 SER354 ARG355 ASP356 GLU357 LEU358 THR359 LYS360 ASN361 GLN362 VAL363 SER364 LEU365 THR366 CYS367 LEU368 VAL369 LYS370 GLY371 PHE372 TYR373 PRO374 SER375 ASP376 ILE377 ALA378 VAL379 GLU380 TRP381 GLU382 SER383 ASN384 GLY385 GLN386 PRO387 GLU388 ASN389 ASN390 TYR391 LYS392 THR393 THR394 PRO395 PRO396 VAL397 LEU398 ASP399 SER400 ASP401 GLY402 SER403 PHE404 PHE405 LEU406 TYR407 SER408 LYS409 LEU410 THR411 VAL412 ASP413 LYS414 SER415 ARG416 TRP417 GLN418 GLN419 GLY420 ASN421 VAL422 PHE423 SER424 CYS425 SER426 VAL427 MET428 HIS429 GLU430 ALA431 LEU432 HIS433 ASN434 HIS435 TYR436 THR437 GLN438 LYS439 SER440 LEU441 SER442 LEU443
Unit 4 HIS2 MET3 VAL4 HIS5 ILE6 THR7 LEU8 ASP9 PRO10 ASP11 THR12 ALA13 ASN14 PRO15 TRP16 LEU17 ILE18 LEU19 SER20 GLU21 ASP22 ARG23 ARG24 GLN25 VAL26 ARG27 LEU28 GLY29 ASP30 THR31 GLN32 GLN33 SER34 ILE35 PRO36 GLY37 ASN38 GLU39 GLU40 ARG41 PHE42 ASP43 SER44 TYR45 PRO46 MET47 VAL48 LEU49 GLY50 ALA51 GLN52 HIS53 PHE54 HIS55 SER56 GLY57 LYS58 HIS59 TYR60 TRP61 GLU62 VAL63 ASP64 VAL65 THR66 GLY67 LYS68 GLU69 ALA70 TRP71 ASP72 LEU73 GLY74 VAL75 CYS76 ARG77 ASP78 SER79 VAL80 ARG81 ARG82 LYS83 GLY84 HIS85 PHE86 LEU87 LEU88 SER89 SER90 LYS91 SER92 GLY93 PHE94 TRP95 THR96 ILE97 TRP98 LEU99 TRP100 ASN101 LYS102 GLN103 LYS104 TYR105 GLU106 ALA107 GLY108 THR109 TYR110 PRO111 GLN112 THR113 PRO114 LEU115 HIS116 LEU117 GLN118 VAL119 PRO120 PRO121 CYS122 GLN123 VAL124 GLY125 ILE126 PHE127 LEU128 ASP129 TYR130 GLU131 ALA132 GLY133 MET134 VAL135 SER136 PHE137 TYR138 ASN139 ILE140 THR141 ASP142 HIS143 GLY144 SER145 LEU146 ILE147 TYR148 SER149 PHE150 SER151 GLU152 CYS153 ALA154 PHE155 THR156 GLY157 PRO158 LEU159 ARG160 PRO161 PHE162 PHE163 SER164 PRO165 GLY166 PHE167 ASN168 ASP169 GLY170 GLY171 LYS172 ASN173 THR174 ALA175 PRO176 LEU177 THR178 LEU179 CYS180 PRO181 LEU182

Ligands
Unit 5 NAG1 NAG2 BMA3 MAN4 NAG5 GAL6 MAN7
Unit 6 NAG1 NAG2 BMA3 MAN4 NAG5 GAL6 MAN7
Unit 7 FUC1451
Unit 8 FUC1451

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany