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Sequence, Chains, Asymmetric and Biological Units

Title THE ORIGIN BINDING DOMAIN OF THE SV40 LARGE T ANTIGEN BOUND FUNCTIONAL PEN PALINDROME DNA (23 BP)
Keywords DNA BINDING PROTEIN, DNA BINDING PROTEIN-DNA COMPLEX
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   2ITL     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Other macromolecule   24-NT PEN ELEMENT OF THE SV40 DNA ORIGIN  W 24 491 0
2  Other macromolecule   24-NT PEN ELEMENT OF THE SV40 DNA ORIGIN  C 24 488 0
3  Protein   LARGE T ANTIGEN  A 120 977 0
4  Protein   LARGE T ANTIGEN  B 115 944 0
5 Water     307 0 307
total       590 2900 307

Proteins
Unit 3 ASP134 PRO135 LYS136 ASP137 PHE138 PRO139 SER140 GLU141 LEU142 LEU143 SER144 PHE145 LEU146 SER147 HIS148 ALA149 VAL150 PHE151 SER152 ASN153 ARG154 THR155 LEU156 ALA157 CYS158 PHE159 ALA160 ILE161 TYR162 THR163 THR164 LYS165 GLU166 LYS167 ALA168 ALA169 LEU170 LEU171 TYR172 LYS173 LYS174 ILE175 MET176 GLU177 LYS178 TYR179 SER180 VAL181 THR182 PHE183 ILE184 SER185 ARG186 HIS187 ASN188 SER189 TYR190 ASN191 HIS192 ASN193 ILE194 LEU195 PHE196 PHE197 LEU198 THR199 PRO200 HIS201 ARG202 HIS203 ARG204 VAL205 SER206 ALA207 ILE208 ASN209 ASN210 TYR211 ALA212 GLN213 LYS214 LEU215 CYS216 THR217 PHE218 SER219 PHE220 LEU221 ILE222 CYS223 LYS224 GLY225 VAL226 ASN227 LYS228 GLU229 TYR230 LEU231 MET232 TYR233 SER234 ALA235 LEU236 THR237 ARG238 ASP239 PRO240 PHE241 SER242 VAL243 ILE244 GLU245 GLU246 SER247 LEU248 PRO249 GLY250 GLY251 LEU252 LYS253
Unit 4 PRO135 LYS136 ASP137 PHE138 PRO139 SER140 GLU141 LEU142 LEU143 SER144 PHE145 LEU146 SER147 HIS148 ALA149 VAL150 PHE151 SER152 ASN153 ARG154 THR155 LEU156 ALA157 CYS158 PHE159 ALA160 ILE161 TYR162 THR163 THR164 LYS165 GLU166 LYS167 ALA168 ALA169 LEU170 LEU171 TYR172 LYS173 LYS174 ILE175 MET176 GLU177 LYS178 TYR179 SER180 VAL181 THR182 PHE183 ILE184 SER185 ARG186 HIS187 ASN188 SER189 TYR190 ASN191 HIS192 ASN193 ILE194 LEU195 PHE196 PHE197 LEU198 THR199 PRO200 HIS201 ARG202 HIS203 ARG204 VAL205 SER206 ALA207 ILE208 ASN209 ASN210 TYR211 ALA212 GLN213 LYS214 LEU215 CYS216 THR217 PHE218 SER219 PHE220 LEU221 ILE222 CYS223 LYS224 GLY225 VAL226 ASN227 LYS228 GLU229 TYR230 LEU231 MET232 TYR233 SER234 ALA235 LEU236 THR237 ARG238 ASP239 PRO240 PHE241 SER242 VAL243 ILE244 GLU245 GLU246 SER247 LEU248 PRO249

Other macromolecules
Unit 1 DA19 DG20 DA21 DG22 DG23 DC24 DC25 DG26 DA27 DG28 DG29 DC30 DG31 DG32 DC33 DC34 DT35 DC36 DG37 DG38 DC39 DC40 DT41 DC42
Unit 2 DA19 DG20 DA21 DG22 DG23 DC24 DC25 DG26 DA27 DG28 DG29 DC30 DC31 DG32 DC33 DC34 DT35 DC36 DG37 DG38 DC39 DC40 DT41 DC42

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany