2ISS - Sequence, Chains, Asymmetric and Biological Units

• Title: STRUCTURE OF THE PLP SYNTHASE HOLOENZYME FROM THERMOTOGA MAR
• Keywords: (BETA/ALPHA)8-BARREL, ALPHA/BETA THREE LAYER SANDWICH, LYASE TRANSFERASE
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	2ISS	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	PYRIDOXAL BIOSYNTHESIS LYASE PDXS	A	281	2129	0
2	Protein	PYRIDOXAL BIOSYNTHESIS LYASE PDXS	B	285	2157	0
3	Protein	PYRIDOXAL BIOSYNTHESIS LYASE PDXS	C	280	2119	0
4	Protein	GLUTAMINE AMIDOTRANSFERASE SUBUNIT PDXT	D	185	1461	0
5	Protein	GLUTAMINE AMIDOTRANSFERASE SUBUNIT PDXT	E	184	1451	0
6	Protein	GLUTAMINE AMIDOTRANSFERASE SUBUNIT PDXT	F	184	1451	0
7	Ligand	PYRIDOXAL BIOSYNTHESIS LYASE PDXS	A	2	0	18
8	Ligand	PYRIDOXAL BIOSYNTHESIS LYASE PDXS	B	2	0	18
9	Ligand	PYRIDOXAL BIOSYNTHESIS LYASE PDXS	C	2	0	18
10	Water			38	0	38
total				1443	10768	92

Proteins

Unit 1	HIS 0 MET 1 GLU 2 ILE 3 LYS 4 LYS 5 GLY 6 THR 7 TRP 8 ILE 9 ILE 10 LYS 11 LYS 12 GLY 13 PHE 14 ALA 15 GLU 16 MET 17 PHE 18 LYS 19 GLY 20 GLY 21 VAL 22 ILE 23 MET 24 ASP 25 VAL 26 THR 27 SER 28 ALA 29 GLU 30 GLN 31 ALA 32 LYS 33 ILE 34 ALA 35 GLU 36 GLU 37 ALA 38 GLY 39 ALA 40 VAL 41 ALA 42 VAL 43 MET 44 ALA 45 LEU 46 GLU 47 ARG 48 VAL 49 PRO 50 ALA 51 ASP 52 ILE 53 ARG 54 LYS 55 GLU 56 GLY 57 GLY 58 VAL 59 ALA 60 ARG 61 MET 62 ALA 63 SER 64 ILE 65 ALA 66 LYS 67 ILE 68 ARG 69 GLU 70 ILE 71 MET 72 GLU 73 ALA 74 VAL 75 SER 76 ILE 77 PRO 78 VAL 79 MET 80 ALA 81 LYS 82 VAL 83 ARG 84 ILE 85 GLY 86 HIS 87 ILE 88 ALA 89 GLU 90 ALA 91 LYS 92 ILE 93 LEU 94 GLU 95 GLU 96 LEU 97 GLY 98 VAL 99 ASP 100 PHE 101 ILE 102 ASP 103 GLU 104 SER 105 GLU 106 VAL 107 LEU 108 THR 109 PRO 110 ALA 111 ASP 112 ASP 113 ARG 114 PHE 115 HIS 116 ILE 117 ASN 118 LYS 119 HIS 120 GLU 121 PHE 122 LYS 123 VAL 124 PRO 125 PHE 126 VAL 127 CYS 128 GLY 129 ALA 130 ARG 131 ASP 132 LEU 133 GLY 134 GLU 135 ALA 136 LEU 137 ARG 138 ARG 139 ILE 140 ALA 141 GLU 142 GLY 143 ALA 144 ALA 145 MET 146 ILE 147 ARG 148 THR 149 LYS 150 GLY 151 GLU 152 ALA 153 GLY 154 THR 155 GLY 156 ASN 157 VAL 158 VAL 159 GLU 160 ALA 161 VAL 162 LYS 163 HIS 164 MET 165 ARG 166 ARG 167 VAL 168 MET 169 GLU 170 GLN 171 ILE 172 LYS 173 GLN 174 VAL 175 THR 176 LYS 177 MET 178 GLU 179 ASP 180 GLU 181 GLU 182 LEU 183 VAL 184 ALA 185 TYR 186 GLY 187 LYS 188 GLU 189 ILE 190 GLY 191 ALA 192 PRO 193 VAL 194 GLU 195 LEU 196 LEU 197 ARG 198 GLU 199 VAL 200 LYS 201 ARG 202 LEU 203 GLY 204 ARG 205 LEU 206 PRO 207 VAL 208 VAL 209 ASN 210 PHE 211 ALA 212 ALA 213 GLY 214 GLY 215 VAL 216 ALA 217 THR 218 PRO 219 ALA 220 ASP 221 ALA 222 ALA 223 LEU 224 MET 225 MET 226 MET 227 LEU 228 GLY 229 ALA 230 ASP 231 GLY 232 VAL 233 PHE 234 VAL 235 GLY 236 SER 237 GLY 238 ILE 239 PHE 240 LYS 241 SER 242 LYS 243 ASP 244 PRO 245 ARG 246 LYS 247 MET 248 ALA 249 LYS 250 ALA 251 MET 252 VAL 253 LEU 254 ALA 255 VAL 256 THR 257 TYR 258 TRP 259 ASP 260 ASN 261 PRO 262 ARG 263 ILE 264 LEU 265 LEU 266 LYS 267 ILE 268 SER 269 GLU 270 ASP 271 ILE 272 GLY 273 GLU 274 PRO 275 MET 276 ARG 277 GLY 278 LEU 279 ASP 280
Unit 2	PRO -4 ARG -3 GLY -2 SER -1 HIS 0 MET 1 GLU 2 ILE 3 LYS 4 LYS 5 GLY 6 THR 7 TRP 8 ILE 9 ILE 10 LYS 11 LYS 12 GLY 13 PHE 14 ALA 15 GLU 16 MET 17 PHE 18 LYS 19 GLY 20 GLY 21 VAL 22 ILE 23 MET 24 ASP 25 VAL 26 THR 27 SER 28 ALA 29 GLU 30 GLN 31 ALA 32 LYS 33 ILE 34 ALA 35 GLU 36 GLU 37 ALA 38 GLY 39 ALA 40 VAL 41 ALA 42 VAL 43 MET 44 ALA 45 LEU 46 GLU 47 ARG 48 VAL 49 PRO 50 ALA 51 ASP 52 ILE 53 ARG 54 LYS 55 GLU 56 GLY 57 GLY 58 VAL 59 ALA 60 ARG 61 MET 62 ALA 63 SER 64 ILE 65 ALA 66 LYS 67 ILE 68 ARG 69 GLU 70 ILE 71 MET 72 GLU 73 ALA 74 VAL 75 SER 76 ILE 77 PRO 78 VAL 79 MET 80 ALA 81 LYS 82 VAL 83 ARG 84 ILE 85 GLY 86 HIS 87 ILE 88 ALA 89 GLU 90 ALA 91 LYS 92 ILE 93 LEU 94 GLU 95 GLU 96 LEU 97 GLY 98 VAL 99 ASP 100 PHE 101 ILE 102 ASP 103 GLU 104 SER 105 GLU 106 VAL 107 LEU 108 THR 109 PRO 110 ALA 111 ASP 112 ASP 113 ARG 114 PHE 115 HIS 116 ILE 117 ASN 118 LYS 119 HIS 120 GLU 121 PHE 122 LYS 123 VAL 124 PRO 125 PHE 126 VAL 127 CYS 128 GLY 129 ALA 130 ARG 131 ASP 132 LEU 133 GLY 134 GLU 135 ALA 136 LEU 137 ARG 138 ARG 139 ILE 140 ALA 141 GLU 142 GLY 143 ALA 144 ALA 145 MET 146 ILE 147 ARG 148 THR 149 LYS 150 GLY 151 GLU 152 ALA 153 GLY 154 THR 155 GLY 156 ASN 157 VAL 158 VAL 159 GLU 160 ALA 161 VAL 162 LYS 163 HIS 164 MET 165 ARG 166 ARG 167 VAL 168 MET 169 GLU 170 GLN 171 ILE 172 LYS 173 GLN 174 VAL 175 THR 176 LYS 177 MET 178 GLU 179 ASP 180 GLU 181 GLU 182 LEU 183 VAL 184 ALA 185 TYR 186 GLY 187 LYS 188 GLU 189 ILE 190 GLY 191 ALA 192 PRO 193 VAL 194 GLU 195 LEU 196 LEU 197 ARG 198 GLU 199 VAL 200 LYS 201 ARG 202 LEU 203 GLY 204 ARG 205 LEU 206 PRO 207 VAL 208 VAL 209 ASN 210 PHE 211 ALA 212 ALA 213 GLY 214 GLY 215 VAL 216 ALA 217 THR 218 PRO 219 ALA 220 ASP 221 ALA 222 ALA 223 LEU 224 MET 225 MET 226 MET 227 LEU 228 GLY 229 ALA 230 ASP 231 GLY 232 VAL 233 PHE 234 VAL 235 GLY 236 SER 237 GLY 238 ILE 239 PHE 240 LYS 241 SER 242 LYS 243 ASP 244 PRO 245 ARG 246 LYS 247 MET 248 ALA 249 LYS 250 ALA 251 MET 252 VAL 253 LEU 254 ALA 255 VAL 256 THR 257 TYR 258 TRP 259 ASP 260 ASN 261 PRO 262 ARG 263 ILE 264 LEU 265 LEU 266 LYS 267 ILE 268 SER 269 GLU 270 ASP 271 ILE 272 GLY 273 GLU 274 PRO 275 MET 276 ARG 277 GLY 278 LEU 279 ASP 280
Unit 3	MET 1 GLU 2 ILE 3 LYS 4 LYS 5 GLY 6 THR 7 TRP 8 ILE 9 ILE 10 LYS 11 LYS 12 GLY 13 PHE 14 ALA 15 GLU 16 MET 17 PHE 18 LYS 19 GLY 20 GLY 21 VAL 22 ILE 23 MET 24 ASP 25 VAL 26 THR 27 SER 28 ALA 29 GLU 30 GLN 31 ALA 32 LYS 33 ILE 34 ALA 35 GLU 36 GLU 37 ALA 38 GLY 39 ALA 40 VAL 41 ALA 42 VAL 43 MET 44 ALA 45 LEU 46 GLU 47 ARG 48 VAL 49 PRO 50 ALA 51 ASP 52 ILE 53 ARG 54 LYS 55 GLU 56 GLY 57 GLY 58 VAL 59 ALA 60 ARG 61 MET 62 ALA 63 SER 64 ILE 65 ALA 66 LYS 67 ILE 68 ARG 69 GLU 70 ILE 71 MET 72 GLU 73 ALA 74 VAL 75 SER 76 ILE 77 PRO 78 VAL 79 MET 80 ALA 81 LYS 82 VAL 83 ARG 84 ILE 85 GLY 86 HIS 87 ILE 88 ALA 89 GLU 90 ALA 91 LYS 92 ILE 93 LEU 94 GLU 95 GLU 96 LEU 97 GLY 98 VAL 99 ASP 100 PHE 101 ILE 102 ASP 103 GLU 104 SER 105 GLU 106 VAL 107 LEU 108 THR 109 PRO 110 ALA 111 ASP 112 ASP 113 ARG 114 PHE 115 HIS 116 ILE 117 ASN 118 LYS 119 HIS 120 GLU 121 PHE 122 LYS 123 VAL 124 PRO 125 PHE 126 VAL 127 CYS 128 GLY 129 ALA 130 ARG 131 ASP 132 LEU 133 GLY 134 GLU 135 ALA 136 LEU 137 ARG 138 ARG 139 ILE 140 ALA 141 GLU 142 GLY 143 ALA 144 ALA 145 MET 146 ILE 147 ARG 148 THR 149 LYS 150 GLY 151 GLU 152 ALA 153 GLY 154 THR 155 GLY 156 ASN 157 VAL 158 VAL 159 GLU 160 ALA 161 VAL 162 LYS 163 HIS 164 MET 165 ARG 166 ARG 167 VAL 168 MET 169 GLU 170 GLN 171 ILE 172 LYS 173 GLN 174 VAL 175 THR 176 LYS 177 MET 178 GLU 179 ASP 180 GLU 181 GLU 182 LEU 183 VAL 184 ALA 185 TYR 186 GLY 187 LYS 188 GLU 189 ILE 190 GLY 191 ALA 192 PRO 193 VAL 194 GLU 195 LEU 196 LEU 197 ARG 198 GLU 199 VAL 200 LYS 201 ARG 202 LEU 203 GLY 204 ARG 205 LEU 206 PRO 207 VAL 208 VAL 209 ASN 210 PHE 211 ALA 212 ALA 213 GLY 214 GLY 215 VAL 216 ALA 217 THR 218 PRO 219 ALA 220 ASP 221 ALA 222 ALA 223 LEU 224 MET 225 MET 226 MET 227 LEU 228 GLY 229 ALA 230 ASP 231 GLY 232 VAL 233 PHE 234 VAL 235 GLY 236 SER 237 GLY 238 ILE 239 PHE 240 LYS 241 SER 242 LYS 243 ASP 244 PRO 245 ARG 246 LYS 247 MET 248 ALA 249 LYS 250 ALA 251 MET 252 VAL 253 LEU 254 ALA 255 VAL 256 THR 257 TYR 258 TRP 259 ASP 260 ASN 261 PRO 262 ARG 263 ILE 264 LEU 265 LEU 266 LYS 267 ILE 268 SER 269 GLU 270 ASP 271 ILE 272 GLY 273 GLU 274 PRO 275 MET 276 ARG 277 GLY 278 LEU 279 ASP 280
Unit 4	HIS 0 MET 1 LYS 2 ILE 3 GLY 4 VAL 5 LEU 6 GLY 7 VAL 8 GLN 9 GLY 10 ASP 11 VAL 12 ARG 13 GLU 14 HIS 15 VAL 16 GLU 17 ALA 18 LEU 19 HIS 20 LYS 21 LEU 22 GLY 23 VAL 24 GLU 25 THR 26 LEU 27 ILE 28 VAL 29 LYS 30 LEU 31 PRO 32 GLU 33 GLN 34 LEU 35 ASP 36 MET 37 VAL 38 ASP 39 GLY 40 LEU 41 ILE 42 LEU 43 PRO 44 GLY 45 GLY 46 GLU 47 SER 48 THR 49 THR 50 MET 51 ILE 52 ARG 53 ILE 54 LEU 55 LYS 56 GLU 57 MET 58 ASP 59 MET 60 ASP 61 GLU 62 LYS 63 LEU 64 VAL 65 GLU 66 ARG 67 ILE 68 ASN 69 ASN 70 GLY 71 LEU 72 PRO 73 VAL 74 PHE 75 ALA 76 THR 77 CYS 78 ALA 79 GLY 80 VAL 81 ILE 82 LEU 83 LEU 84 ALA 85 LYS 86 ARG 87 ILE 88 LYS 89 GLN 93 GLU 94 LYS 95 LEU 96 GLY 97 VAL 98 LEU 99 ASP 100 ILE 101 THR 102 VAL 103 GLU 104 ARG 105 ASN 106 ALA 107 TYR 108 GLY 109 ARG 110 GLN 111 VAL 112 GLU 113 SER 114 PHE 115 GLU 116 THR 117 PHE 118 VAL 119 GLU 120 ILE 121 PRO 122 ALA 123 VAL 124 GLY 125 LYS 126 ASP 127 PRO 128 PHE 129 ARG 130 ALA 131 ILE 132 PHE 133 ILE 134 ARG 135 ALA 136 PRO 137 ARG 138 ILE 139 VAL 140 GLU 141 THR 142 GLY 143 LYS 144 ASN 145 VAL 146 GLU 147 ILE 148 LEU 149 ALA 150 THR 151 TYR 152 ASP 153 TYR 154 ASP 155 PRO 156 VAL 157 LEU 158 VAL 159 LYS 160 GLU 161 GLY 162 ASN 163 ILE 164 LEU 165 ALA 166 CYS 167 THR 168 PHE 169 HIS 170 PRO 171 GLU 172 LEU 173 THR 174 ASP 175 ASP 176 LEU 177 ARG 178 LEU 179 HIS 180 ARG 181 TYR 182 PHE 183 LEU 184 GLU 185 MET 186 VAL 187
Unit 5	MET 1 LYS 2 ILE 3 GLY 4 VAL 5 LEU 6 GLY 7 VAL 8 GLN 9 GLY 10 ASP 11 VAL 12 ARG 13 GLU 14 HIS 15 VAL 16 GLU 17 ALA 18 LEU 19 HIS 20 LYS 21 LEU 22 GLY 23 VAL 24 GLU 25 THR 26 LEU 27 ILE 28 VAL 29 LYS 30 LEU 31 PRO 32 GLU 33 GLN 34 LEU 35 ASP 36 MET 37 VAL 38 ASP 39 GLY 40 LEU 41 ILE 42 LEU 43 PRO 44 GLY 45 GLY 46 GLU 47 SER 48 THR 49 THR 50 MET 51 ILE 52 ARG 53 ILE 54 LEU 55 LYS 56 GLU 57 MET 58 ASP 59 MET 60 ASP 61 GLU 62 LYS 63 LEU 64 VAL 65 GLU 66 ARG 67 ILE 68 ASN 69 ASN 70 GLY 71 LEU 72 PRO 73 VAL 74 PHE 75 ALA 76 THR 77 CYS 78 ALA 79 GLY 80 VAL 81 ILE 82 LEU 83 LEU 84 ALA 85 LYS 86 ARG 87 ILE 88 LYS 89 GLN 93 GLU 94 LYS 95 LEU 96 GLY 97 VAL 98 LEU 99 ASP 100 ILE 101 THR 102 VAL 103 GLU 104 ARG 105 ASN 106 ALA 107 TYR 108 GLY 109 ARG 110 GLN 111 VAL 112 GLU 113 SER 114 PHE 115 GLU 116 THR 117 PHE 118 VAL 119 GLU 120 ILE 121 PRO 122 ALA 123 VAL 124 GLY 125 LYS 126 ASP 127 PRO 128 PHE 129 ARG 130 ALA 131 ILE 132 PHE 133 ILE 134 ARG 135 ALA 136 PRO 137 ARG 138 ILE 139 VAL 140 GLU 141 THR 142 GLY 143 LYS 144 ASN 145 VAL 146 GLU 147 ILE 148 LEU 149 ALA 150 THR 151 TYR 152 ASP 153 TYR 154 ASP 155 PRO 156 VAL 157 LEU 158 VAL 159 LYS 160 GLU 161 GLY 162 ASN 163 ILE 164 LEU 165 ALA 166 CYS 167 THR 168 PHE 169 HIS 170 PRO 171 GLU 172 LEU 173 THR 174 ASP 175 ASP 176 LEU 177 ARG 178 LEU 179 HIS 180 ARG 181 TYR 182 PHE 183 LEU 184 GLU 185 MET 186 VAL 187
Unit 6	MET 1 LYS 2 ILE 3 GLY 4 VAL 5 LEU 6 GLY 7 VAL 8 GLN 9 GLY 10 ASP 11 VAL 12 ARG 13 GLU 14 HIS 15 VAL 16 GLU 17 ALA 18 LEU 19 HIS 20 LYS 21 LEU 22 GLY 23 VAL 24 GLU 25 THR 26 LEU 27 ILE 28 VAL 29 LYS 30 LEU 31 PRO 32 GLU 33 GLN 34 LEU 35 ASP 36 MET 37 VAL 38 ASP 39 GLY 40 LEU 41 ILE 42 LEU 43 PRO 44 GLY 45 GLY 46 GLU 47 SER 48 THR 49 THR 50 MET 51 ILE 52 ARG 53 ILE 54 LEU 55 LYS 56 GLU 57 MET 58 ASP 59 MET 60 ASP 61 GLU 62 LYS 63 LEU 64 VAL 65 GLU 66 ARG 67 ILE 68 ASN 69 ASN 70 GLY 71 LEU 72 PRO 73 VAL 74 PHE 75 ALA 76 THR 77 CYS 78 ALA 79 GLY 80 VAL 81 ILE 82 LEU 83 LEU 84 ALA 85 LYS 86 ARG 87 ILE 88 LYS 89 GLN 93 GLU 94 LYS 95 LEU 96 GLY 97 VAL 98 LEU 99 ASP 100 ILE 101 THR 102 VAL 103 GLU 104 ARG 105 ASN 106 ALA 107 TYR 108 GLY 109 ARG 110 GLN 111 VAL 112 GLU 113 SER 114 PHE 115 GLU 116 THR 117 PHE 118 VAL 119 GLU 120 ILE 121 PRO 122 ALA 123 VAL 124 GLY 125 LYS 126 ASP 127 PRO 128 PHE 129 ARG 130 ALA 131 ILE 132 PHE 133 ILE 134 ARG 135 ALA 136 PRO 137 ARG 138 ILE 139 VAL 140 GLU 141 THR 142 GLY 143 LYS 144 ASN 145 VAL 146 GLU 147 ILE 148 LEU 149 ALA 150 THR 151 TYR 152 ASP 153 TYR 154 ASP 155 PRO 156 VAL 157 LEU 158 VAL 159 LYS 160 GLU 161 GLY 162 ASN 163 ILE 164 LEU 165 ALA 166 CYS 167 THR 168 PHE 169 HIS 170 PRO 171 GLU 172 LEU 173 THR 174 ASP 175 ASP 176 LEU 177 ARG 178 LEU 179 HIS 180 ARG 181 TYR 182 PHE 183 LEU 184 GLU 185 MET 186 VAL 187

Ligands

Unit 7	5RP 294 PO4 300
Unit 8	5RP 294 PO4 301
Unit 9	5RP 294 PO4 302