Jena Library of Biological Macromolecules - Home Page [Image Library Home] [Helix Analysis Home]
[Image Library Entry] [Analyse Helix]

Sequence, Chains, Asymmetric and Biological Units

Title THE NMR STRUCTURES OF (RGCUGAGGCU)2 AND (RGCGGAUGCU)2
Keywords RNA INERNAL LOOPS, SHEARED GA PAIRS, GU WOBBLE, THERMODYNAMICS
Experiment NMR
Number of Models  15


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   2IRN     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  RNA    A 9 294 0
2  RNA    B 9 294 0
total       18 588 0

Nucleic acids
Unit 1 G1 C2 U3 G4 A5 G6 G7 C8 U9
Unit 2 G10 C11 U12 G13 A14 G15 G16 C17 U18

Chirality of ribose and phosphate atoms

Check the naming of phosphate and ribose substituents. Recommended for phosphate oxygens and for ribose hydrogens in NMR structures.


Go to    [Image Library Home]    [Helix Analysis Home]    [Image Library Entry]    [Analyse Helix]
Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany