|
[Image Library Home] | [Helix Analysis Home] |
| [Image Library Entry] | [Analyse Helix] |
| Title | MODEL STRUCTURE OF DNA DODECAMER D(CGCGAATTCGCG)2 BOUND TO BIS[5-(2-AMIDINO)-2-BENZIMIDAZOLYL]METHANE | |
| Keywords | MODEL BUILT, MINOR GROOVE BINDING, DNA-DRUG, BENZIMIDAZOLE DERIVATIVE | |
| Experiment | theoretical model | |
| Number of Models | 1 |
| Database | ID code | Status | Coordinate files | ||
| Header | Asymmetric unit | Biological unit | |||
| PDB | 2IRK | released | available | available | Quaternary Structure Server |
| Unit | Type | Name | Chain ID | Residues | Atoms | Hetatoms |
|---|---|---|---|---|---|---|
| 1 | DNA | A | 12 | 379 | 0 | |
| 2 | DNA | B | 12 | 379 | 0 | |
| 3 | Ligand | 1 | 0 | 43 | ||
| total | 25 | 758 | 43 |
| Unit 1 | C1 G2 C3 G4 A5 A6 T7 T8 C9 G10 C11 G12 |
| Unit 2 | C13 G14 C15 G16 A17 A18 T19 T20 C21 G22 C23 G24 |
| Unit 3 | 2SB25 |
Check the naming of phosphate and ribose substituents. Recommended for phosphate oxygens and for ribose hydrogens in NMR structures.
| Perl script: | PDBscan.pl (15 Sep 2016) |
| Author: | Peter Slickers (slickers@leibniz-fli.de), IMB Jena, Germany |