2IPU - Sequence, Chains, Asymmetric and Biological Units

• Title: PFA1 FAB FRAGMENT COMPLEXED WITH ABETA 1-8 PEPTIDE
• Keywords: WWDDD, CDR, ABETA, IMMUNE SYSTEM
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	2IPU	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	IGG2A FAB FRAGMENT HEAVY CHAIN	L	219	1697	0
2	Protein	IGG2A FAB FRAGMENT LIGHT CHAIN KAPPA	H	223	1674	0
3	Protein	IGG2A FAB FRAGMENT HEAVY CHAIN	K	219	1697	0
4	Protein	IGG2A FAB FRAGMENT LIGHT CHAIN KAPPA	G	219	1656	0
5	Protein	ABETA 1-8 PEPTIDE	P	7	61	0
6	Protein	ABETA 1-8 PEPTIDE	Q	7	61	0
7	Ligand	IGG2A FAB FRAGMENT HEAVY CHAIN	L	4	0	22
8	Ligand	IGG2A FAB FRAGMENT LIGHT CHAIN KAPPA	H	1	0	4
9	Ligand	IGG2A FAB FRAGMENT HEAVY CHAIN	K	4	0	22
10	Water			118	0	118
total				1021	6846	166

Proteins

Unit 1	ASP 1 VAL 2 LEU 3 MET 4 THR 5 GLN 6 THR 7 PRO 8 LEU 9 SER 10 LEU 11 PRO 12 VAL 13 SER 14 LEU 15 GLY 16 ASP 17 GLN 18 ALA 19 SER 20 ILE 21 SER 22 CYS 23 ARG 24 SER 25 SER 26 GLN 27 SER 27A ILE 27B VAL 27C HIS 27D SER 27E ASN 28 GLY 29 ASN 30 THR 31 TYR 32 LEU 33 GLU 34 TRP 35 TYR 36 LEU 37 GLN 38 LYS 39 PRO 40 GLY 41 GLN 42 SER 43 PRO 44 LYS 45 LEU 46 LEU 47 ILE 48 TYR 49 LYS 50 VAL 51 SER 52 ASN 53 ARG 54 PHE 55 SER 56 GLY 57 VAL 58 PRO 59 ASP 60 ARG 61 PHE 62 SER 63 GLY 64 SER 65 GLY 66 SER 67 GLY 68 THR 69 ASP 70 PHE 71 THR 72 LEU 73 LYS 74 ILE 75 SER 76 ARG 77 VAL 78 GLU 79 ALA 80 GLU 81 ASP 82 LEU 83 GLY 84 VAL 85 TYR 86 TYR 87 CYS 88 PHE 89 GLN 90 GLY 91 SER 92 HIS 93 VAL 94 PRO 95 LEU 96 THR 97 PHE 98 GLY 99 ALA 100 GLY 101 THR 102 LYS 103 LEU 104 GLU 105 LEU 106 LYS 106A ARG 107 ALA 108 ASP 109 ALA 110 ALA 111 PRO 112 THR 113 VAL 114 SER 115 ILE 116 PHE 117 PRO 118 PRO 119 SER 120 SER 121 GLU 122 GLN 123 LEU 124 THR 125 SER 126 GLY 127 GLY 128 ALA 129 SER 130 VAL 131 VAL 132 CYS 133 PHE 134 LEU 135 ASN 136 ASN 137 PHE 138 TYR 139 PRO 140 LYS 141 ASP 142 ILE 143 ASN 144 VAL 145 LYS 146 TRP 147 LYS 148 ILE 149 ASP 150 GLY 151 SER 152 GLU 153 ARG 154 GLN 155 ASN 156 GLY 157 VAL 158 LEU 159 ASN 160 SER 161 TRP 162 THR 163 ASP 164 GLN 165 ASP 166 SER 167 LYS 168 ASP 169 SER 170 THR 171 TYR 172 SER 173 MET 174 SER 175 SER 176 THR 177 LEU 178 THR 179 LEU 180 THR 181 LYS 182 ASP 183 GLU 184 TYR 185 GLU 186 ARG 187 HIS 188 ASN 189 SER 190 TYR 191 THR 192 CYS 193 GLU 194 ALA 195 THR 196 HIS 197 LYS 198 THR 199 SER 200 THR 201 SER 202 PRO 203 ILE 204 VAL 205 LYS 206 SER 207 PHE 208 ASN 209 ARG 210 ASN 211 GLU 212 CYS 213
Unit 2	GLN 1 VAL 2 THR 3 LEU 4 LYS 5 GLU 6 SER 7 GLY 8 PRO 9 GLY 10 ILE 11 LEU 12 LYS 13 PRO 14 SER 15 GLN 16 THR 17 LEU 18 SER 19 LEU 20 THR 21 CYS 22 SER 23 PHE 24 SER 25 GLY 26 PHE 27 SER 28 LEU 29 SER 30 THR 31 SER 32 GLY 33 MET 34 GLY 35 VAL 35A GLY 35B TRP 36 ILE 37 ARG 38 GLN 39 PRO 40 SER 41 GLY 42 LYS 43 GLY 44 LEU 45 GLU 46 TRP 47 LEU 48 ALA 49 HIS 50 ILE 51 TRP 52 TRP 53 ASP 54 ASP 55 ASP 56 ARG 57 SER 58 TYR 59 ASN 60 PRO 61 SER 62 LEU 63 LYS 64 SER 65 GLN 66 LEU 67 THR 68 ILE 69 SER 70 LYS 71 ASP 72 ALA 73 ALA 74 ARG 75 ASN 76 GLN 77 VAL 78 PHE 79 LEU 80 ARG 81 ILE 82 THR 82A SER 82B VAL 82C ASP 83 THR 84 ALA 85 ASP 86 THR 87 ALA 88 THR 89 TYR 90 TYR 91 CYS 92 VAL 93 ARG 94 ARG 95 ALA 96 HIS 97 THR 98 THR 99 VAL 100 LEU 100A GLY 100B ASP 100C TRP 100D PHE 100E ALA 101 TYR 102 TRP 103 GLY 104 GLN 105 GLY 106 THR 107 LEU 108 VAL 109 THR 110 VAL 111 SER 112 ALA 113 ALA 114 LYS 115 THR 116 THR 117 ALA 118 PRO 119 SER 120 VAL 121 TYR 122 PRO 123 LEU 124 ALA 125 PRO 126 VAL 127 CYS 128 GLY 129 GLY 133 SER 134 SER 135 VAL 136 THR 137 LEU 138 GLY 139 CYS 140 LEU 141 VAL 142 LYS 143 GLY 144 TYR 145 PHE 146 PRO 147 GLU 148 PRO 149 VAL 150 THR 151 LEU 152 THR 153 TRP 154 ASN 155 SER 156 GLY 157 SER 158 LEU 159 SER 160 SER 161 GLY 162 VAL 163 HIS 164 THR 165 PHE 166 PRO 167 ALA 168 VAL 169 LEU 170 GLN 171 SER 172 GLY 173 LEU 174 TYR 175 THR 176 LEU 177 SER 178 SER 179 SER 180 VAL 181 THR 182 VAL 183 THR 184 SER 185 SER 186 THR 187 TRP 188 PRO 189 SER 190 GLN 191 SER 192 ILE 193 THR 194 CYS 195 ASN 196 VAL 197 ALA 198 HIS 199 PRO 200 ALA 201 SER 202 SER 203 THR 204 LYS 205 VAL 206 ASP 207 LYS 208 LYS 209 ILE 210 GLU 211 PRO 212 ARG 213 GLY 214 PRO 215 THR 216
Unit 3	ASP 1 VAL 2 LEU 3 MET 4 THR 5 GLN 6 THR 7 PRO 8 LEU 9 SER 10 LEU 11 PRO 12 VAL 13 SER 14 LEU 15 GLY 16 ASP 17 GLN 18 ALA 19 SER 20 ILE 21 SER 22 CYS 23 ARG 24 SER 25 SER 26 GLN 27 SER 27A ILE 27B VAL 27C HIS 27D SER 27E ASN 28 GLY 29 ASN 30 THR 31 TYR 32 LEU 33 GLU 34 TRP 35 TYR 36 LEU 37 GLN 38 LYS 39 PRO 40 GLY 41 GLN 42 SER 43 PRO 44 LYS 45 LEU 46 LEU 47 ILE 48 TYR 49 LYS 50 VAL 51 SER 52 ASN 53 ARG 54 PHE 55 SER 56 GLY 57 VAL 58 PRO 59 ASP 60 ARG 61 PHE 62 SER 63 GLY 64 SER 65 GLY 66 SER 67 GLY 68 THR 69 ASP 70 PHE 71 THR 72 LEU 73 LYS 74 ILE 75 SER 76 ARG 77 VAL 78 GLU 79 ALA 80 GLU 81 ASP 82 LEU 83 GLY 84 VAL 85 TYR 86 TYR 87 CYS 88 PHE 89 GLN 90 GLY 91 SER 92 HIS 93 VAL 94 PRO 95 LEU 96 THR 97 PHE 98 GLY 99 ALA 100 GLY 101 THR 102 LYS 103 LEU 104 GLU 105 LEU 106 LYS 106A ARG 107 ALA 108 ASP 109 ALA 110 ALA 111 PRO 112 THR 113 VAL 114 SER 115 ILE 116 PHE 117 PRO 118 PRO 119 SER 120 SER 121 GLU 122 GLN 123 LEU 124 THR 125 SER 126 GLY 127 GLY 128 ALA 129 SER 130 VAL 131 VAL 132 CYS 133 PHE 134 LEU 135 ASN 136 ASN 137 PHE 138 TYR 139 PRO 140 LYS 141 ASP 142 ILE 143 ASN 144 VAL 145 LYS 146 TRP 147 LYS 148 ILE 149 ASP 150 GLY 151 SER 152 GLU 153 ARG 154 GLN 155 ASN 156 GLY 157 VAL 158 LEU 159 ASN 160 SER 161 TRP 162 THR 163 ASP 164 GLN 165 ASP 166 SER 167 LYS 168 ASP 169 SER 170 THR 171 TYR 172 SER 173 MET 174 SER 175 SER 176 THR 177 LEU 178 THR 179 LEU 180 THR 181 LYS 182 ASP 183 GLU 184 TYR 185 GLU 186 ARG 187 HIS 188 ASN 189 SER 190 TYR 191 THR 192 CYS 193 GLU 194 ALA 195 THR 196 HIS 197 LYS 198 THR 199 SER 200 THR 201 SER 202 PRO 203 ILE 204 VAL 205 LYS 206 SER 207 PHE 208 ASN 209 ARG 210 ASN 211 GLU 212 CYS 213
Unit 4	GLN 1 VAL 2 THR 3 LEU 4 LYS 5 GLU 6 SER 7 GLY 8 PRO 9 GLY 10 ILE 11 LEU 12 LYS 13 PRO 14 SER 15 GLN 16 THR 17 LEU 18 SER 19 LEU 20 THR 21 CYS 22 SER 23 PHE 24 SER 25 GLY 26 PHE 27 SER 28 LEU 29 SER 30 THR 31 SER 32 GLY 33 MET 34 GLY 35 VAL 35A GLY 35B TRP 36 ILE 37 ARG 38 GLN 39 PRO 40 SER 41 GLY 42 LYS 43 GLY 44 LEU 45 GLU 46 TRP 47 LEU 48 ALA 49 HIS 50 ILE 51 TRP 52 TRP 53 ASP 54 ASP 55 ASP 56 ARG 57 SER 58 TYR 59 ASN 60 PRO 61 SER 62 LEU 63 LYS 64 SER 65 GLN 66 LEU 67 THR 68 ILE 69 SER 70 LYS 71 ASP 72 ALA 73 ALA 74 ARG 75 ASN 76 GLN 77 VAL 78 PHE 79 LEU 80 ARG 81 ILE 82 THR 82A SER 82B VAL 82C ASP 83 THR 84 ALA 85 ASP 86 THR 87 ALA 88 THR 89 TYR 90 TYR 91 CYS 92 VAL 93 ARG 94 ARG 95 ALA 96 HIS 97 THR 98 THR 99 VAL 100 LEU 100A GLY 100B ASP 100C TRP 100D PHE 100E ALA 101 TYR 102 TRP 103 GLY 104 GLN 105 GLY 106 THR 107 LEU 108 VAL 109 THR 110 VAL 111 SER 112 ALA 113 ALA 114 LYS 115 THR 116 THR 117 ALA 118 PRO 119 SER 120 VAL 121 TYR 122 PRO 123 LEU 124 ALA 125 PRO 126 VAL 127 CYS 128 GLY 133 SER 134 SER 135 VAL 136 THR 137 LEU 138 GLY 139 CYS 140 LEU 141 VAL 142 LYS 143 GLY 144 TYR 145 PHE 146 PRO 147 GLU 148 PRO 149 VAL 150 THR 151 LEU 152 THR 153 TRP 154 ASN 155 SER 156 GLY 157 SER 158 LEU 159 SER 160 SER 161 GLY 162 VAL 163 HIS 164 THR 165 PHE 166 PRO 167 ALA 168 VAL 169 LEU 170 GLN 171 SER 172 GLY 173 LEU 174 TYR 175 THR 176 LEU 177 SER 178 SER 179 SER 180 VAL 181 THR 182 VAL 183 THR 184 SER 185 SER 186 THR 187 TRP 188 PRO 189 SER 190 GLN 191 SER 192 ILE 193 THR 194 CYS 195 ASN 196 VAL 197 ALA 198 HIS 199 PRO 200 ALA 201 SER 202 SER 203 THR 204 LYS 205 VAL 206 ASP 207 LYS 208 LYS 209 ILE 210 GLU 211 PRO 212 ARG 213
Unit 5	ALA 2 GLU 3 PHE 4 ARG 5 HIS 6 ASP 7 SER 8
Unit 6	ALA 2 GLU 3 PHE 4 ARG 5 HIS 6 ASP 7 SER 8

Ligands

Unit 7	GOL 907 GOL 909 GOL 911 ACM 1219
Unit 8	ACM 1138
Unit 9	GOL 901 GOL 903 GOL 905 ACM 1219