[Image Library Home] | [Image Library Entry] |
Title | CRYSTAL STRUCTURE OF PLAUTIA STALI INTESTINE VIRUS INTERGENIC REGION INTERNAL RIBOSOME ENTRY SITE RIBOSOMAL BINDING DOMAIN RNA AT 3.1 ANGSTROMS | |
Keywords | RNA; IRES; RIBOSOMAL BINDING DOMAIN; PSIV; UNDER WOUND HELIX; DOUBLE-NESTED PSEUDOKNOT | |
Experiment | X-ray diffraction | |
Number of Models | 1 |
Database | ID code | Status | Coordinate files | ||
Header | Asymmetric unit | Biological unit | |||
PDB | 2IL9 | released | available | available | Quaternary Structure Server |
Unit | Type | Name | Chain ID | Residues | Atoms | Hetatoms |
---|---|---|---|---|---|---|
1 | RNA | A | 135 | 2865 | 0 | |
2 | RNA | M | 132 | 2800 | 0 | |
total | 267 | 5665 | 0 |
Unit 1 | C6003 U6004 G6005 A6006 C6007 U6008 A6009 U6010 G6011 U6012 G6013 A6014 U6015 C6016 U6017 U6018 A6019 U6020 U6021 A6022 A6023 A6024 A6025 U6026 U6027 A6028 G6029 G6030 U6031 U6032 A6033 A6034 A6035 C6039 G6040 A6041 G6042 G6043 U6044 U6045 A6046 A6047 A6048 A6049 A6050 U6051 A6052 G6053 U6054 U6055 U6056 U6057 A6058 A6059 U6060 A6061 U6062 U6063 G6064 C6065 U6066 A6067 U6068 A6069 G6070 U6071 A6075 G6076 A6077 G6078 G6079 U6080 C6081 U6082 U6083 G6084 C6084A G6084B A6084C A6084D A6084E G6084F C6095 U6096 U6097 A6098 C6099 C6100 A6101 C6102 A6103 C6104 A6105 A6106 G6107 A6108 U6109 G6110 G6111 A6112 C6113 C6114 G6115 G6116 A6117 G6118 C6119 G6119A A6119B A6119C A6119D G6119E C6124 U6125 C6126 C6127 A6128 A6129 U6130 A6131 U6132 C6133 U6134 A6135 G6136 U6137 G6138 U6139 A6140 C6141 C6142 C6143 U6144 C6145 G6146 |
Unit 2 | C6003 U6004 G6005 A6006 C6007 U6008 A6009 U6010 G6011 U6012 G6013 A6014 U6015 C6016 U6017 U6018 A6019 U6020 U6021 A6022 A6023 A6024 A6025 U6026 U6027 A6028 G6029 G6030 U6031 U6032 A6033 A6034 A6035 U6036 C6039 G6040 A6041 G6042 G6043 U6044 U6045 A6046 A6047 A6048 A6049 A6050 U6051 A6052 G6053 U6054 U6055 U6056 U6057 A6058 A6059 U6060 A6061 U6062 U6063 G6064 C6065 U6066 A6067 A6075 G6076 A6077 G6078 G6079 U6080 C6081 U6082 U6083 G6084 C6084A G6084B A6084C A6084D A6084E G6084F C6095 U6096 U6097 A6098 C6099 C6100 A6101 C6102 A6103 C6104 A6105 A6106 G6107 A6108 U6109 G6110 G6111 A6112 C6113 C6114 G6115 G6116 A6117 G6118 C6119 G6119A A6119B A6119C A6119D G6119E C6124 U6125 C6126 C6127 A6128 A6129 U6130 A6131 U6132 C6133 U6134 A6135 G6136 U6137 G6138 U6139 A6140 C6141 C6142 C6143 U6144 C6145 G6146 |
Check the naming of phosphate and ribose substituents. Recommended for phosphate oxygens and for ribose hydrogens in NMR structures.
Perl script: | PDBscan.pl (15 Sep 2016) |
Author: | Peter Slickers (slickers@leibniz-fli.de), IMB Jena, Germany |