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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF A PUTATIVE UDP-GLUCOSE PYROPHOSPHORYLASE FROM ARABIDOPSIS THALIANA WITH BOUND UDP- GLUCOSE
Keywords AT3G03250, UDP, PUTATIVE UDP-GLUCOSE PYROPHOSPHORYLASE, STRUCTURAL GENOMICS FUNCTIONAL FOLLOW-UP STUDY, STRUCTURAL GENOMICS, PROTEIN STRUCTURE INITIATIVE, PSI, CESG, CENTER FOR EUKARYOTIC STRUCTURAL GENOMICS, TRANSFERASE
Experiment X-ray diffraction
Number of Models  2

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   2ICY     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   PROBABLE UTP-GLUCOSE-1-PHOSPHATE URIDYLYLTRANSFERASE 2  A 456 3550 0
2  Protein   PROBABLE UTP-GLUCOSE-1-PHOSPHATE URIDYLYLTRANSFERASE 2  B 463 3602 0
3  Ligand   PROBABLE UTP-GLUCOSE-1-PHOSPHATE URIDYLYLTRANSFERASE 2  A 2 0 40
4  Ligand   PROBABLE UTP-GLUCOSE-1-PHOSPHATE URIDYLYLTRANSFERASE 2  B 1 0 36
5 Water     848 0 848
total       1770 7152 924
Proteins
Unit 1 THR5 GLU6 ASN7 LEU8 PRO9 GLN10 LEU11 LYS12 SER13 ALA14 VAL15 ASP16 GLY17 LEU18 THR19 GLU20 MET21 SER22 GLU23 SER24 GLU25 LYS26 SER27 GLY28 PHE29 ILE30 SER31 LEU32 VAL33 SER34 ARG35 TYR36 LEU37 ILE44 GLU45 TRP46 SER47 LYS48 ILE49 GLN50 THR51 PRO52 THR53 ASP54 GLU55 ILE56 VAL57 VAL58 PRO59 TYR60 GLU61 LYS62 MET63 THR64 PRO65 VAL66 SER67 GLN68 ASP69 VAL70 ALA71 GLU72 THR73 LYS74 ASN75 LEU76 LEU77 ASP78 LYS79 LEU80 VAL81 VAL82 LEU83 LYS84 LEU85 ASN86 GLY87 GLY88 LEU89 GLY90 THR91 THR92 MET93 GLY94 CYS95 THR96 GLY97 PRO98 LYS99 SER100 VAL101 ILE102 GLU103 VAL104 ARG105 ASP106 GLY107 LEU108 THR109 PHE110 LEU111 ASP112 LEU113 ILE114 VAL115 ILE116 GLN117 ILE118 GLU119 ASN120 LEU121 ASN122 ASN123 LYS124 TYR125 GLY126 CYS127 LYS128 VAL129 PRO130 LEU131 VAL132 LEU133 MET134 ASN135 SER136 PHE137 ASN138 THR139 HIS140 ASP141 ASP142 THR143 HIS144 LYS145 ILE146 VAL147 GLU148 LYS149 TYR150 THR151 ASN152 SER153 ASN154 VAL155 ASP156 ILE157 HIS158 THR159 PHE160 ASN161 GLN162 SER163 LYS164 TYR165 PRO166 ARG167 VAL168 VAL169 ALA170 ASP171 GLU172 PHE173 VAL174 PRO175 TRP176 PRO177 SER178 LYS179 GLY180 LYS181 THR182 ASP183 LYS184 GLU185 GLY186 TRP187 TYR188 PRO189 PRO190 GLY191 HIS192 GLY193 ASP194 VAL195 PHE196 PRO197 ALA198 LEU199 MET200 ASN201 SER202 GLY203 LYS204 LEU205 ASP206 THR207 PHE208 LEU209 SER210 GLN211 GLY212 LYS213 GLU214 TYR215 VAL216 PHE217 VAL218 ALA219 ASN220 SER221 ASP222 ASN223 LEU224 GLY225 ALA226 ILE227 VAL228 ASP229 LEU230 THR231 ILE232 LEU233 LYS234 HIS235 LEU236 ILE237 GLN238 ASN239 LYS240 ASN241 GLU242 TYR243 CYS244 MET245 GLU246 VAL247 THR248 PRO249 LYS250 THR251 LEU252 ALA253 ASP254 VAL255 LYS256 GLY257 GLY258 THR259 LEU260 ILE261 SER262 TYR263 GLU264 GLY265 LYS266 VAL267 GLN268 LEU269 LEU270 GLU271 ILE272 ALA273 GLN274 VAL275 PRO276 ASP277 GLU278 HIS279 VAL280 ASN281 GLU282 PHE283 LYS284 SER285 ILE286 GLU287 LYS288 PHE289 LYS290 ILE291 PHE292 ASN293 THR294 ASN295 ASN296 LEU297 TRP298 VAL299 ASN300 LEU301 LYS302 ALA303 ILE304 LYS305 LYS306 LEU307 VAL308 GLU309 ALA310 ASP311 ALA312 LEU313 LYS314 MET315 GLU316 ILE317 ILE318 PRO319 ASN320 PRO321 LYS322 GLU323 VAL324 ASP325 GLY326 VAL327 LYS328 VAL329 LEU330 GLN331 LEU332 GLU333 THR334 ALA335 ALA336 GLY337 ALA338 ALA339 ILE340 ARG341 PHE342 PHE343 ASP344 ASN345 ALA346 ILE347 GLY348 VAL349 ASN350 VAL351 PRO352 ARG353 SER354 ARG355 PHE356 LEU357 PRO358 VAL359 LYS360 ALA361 SER362 SER363 ASP364 LEU365 LEU366 LEU367 VAL368 GLN369 SER370 ASP371 LEU372 TYR373 THR374 LEU375 VAL376 ASP377 GLY378 PHE379 VAL380 THR381 ARG382 ASN383 LYS384 ALA385 ARG386 THR387 ASN388 PRO389 SER390 ASN391 PRO392 SER393 ILE394 GLU395 LEU396 GLY397 PRO398 GLU399 PHE400 LYS401 LYS402 VAL403 ALA404 THR405 PHE406 LEU407 SER408 ARG409 PHE410 LYS411 SER412 ILE413 PRO414 SER415 ILE416 VAL417 GLU418 LEU419 ASP420 SER421 LEU422 LYS423 VAL424 SER425 GLY426 ASP427 VAL428 TRP429 PHE430 GLY431 SER432 SER433 ILE434 VAL435 LEU436 LYS437 GLY438 LYS439 VAL440 THR441 VAL442 ALA443 ALA444 LYS445 SER446 GLY447 VAL448 LYS449 LEU450 GLU451 ILE452 PRO453 ASP454 ARG455 ALA456 VAL457 VAL458 GLU459 ASN460 LYS461 ASN462 ILE463 ASN464 GLY465 PRO466
Unit 2 ASN7 LEU8 PRO9 GLN10 LEU11 LYS12 SER13 ALA14 VAL15 ASP16 GLY17 LEU18 THR19 GLU20 MET21 SER22 GLU23 SER24 GLU25 LYS26 SER27 GLY28 PHE29 ILE30 SER31 LEU32 VAL33 SER34 ARG35 TYR36 LEU37 SER38 GLY39 GLU40 ALA41 GLN42 HIS43 ILE44 GLU45 TRP46 SER47 LYS48 ILE49 GLN50 THR51 PRO52 THR53 ASP54 GLU55 ILE56 VAL57 VAL58 PRO59 TYR60 GLU61 LYS62 MET63 THR64 PRO65 VAL66 SER67 GLN68 ASP69 VAL70 ALA71 GLU72 THR73 LYS74 ASN75 LEU76 LEU77 ASP78 LYS79 LEU80 VAL81 VAL82 LEU83 LYS84 LEU85 ASN86 GLY87 GLY88 LEU89 GLY90 THR91 THR92 MET93 GLY94 CYS95 THR96 GLY97 PRO98 LYS99 SER100 VAL101 ILE102 GLU103 VAL104 ARG105 ASP106 GLY107 LEU108 THR109 PHE110 LEU111 ASP112 LEU113 ILE114 VAL115 ILE116 GLN117 ILE118 GLU119 ASN120 LEU121 ASN122 ASN123 LYS124 TYR125 GLY126 CYS127 LYS128 VAL129 PRO130 LEU131 VAL132 LEU133 MET134 ASN135 SER136 PHE137 ASN138 THR139 HIS140 ASP141 ASP142 THR143 HIS144 LYS145 ILE146 VAL147 GLU148 LYS149 TYR150 THR151 ASN152 SER153 ASN154 VAL155 ASP156 ILE157 HIS158 THR159 PHE160 ASN161 GLN162 SER163 LYS164 TYR165 PRO166 ARG167 VAL168 VAL169 ALA170 ASP171 GLU172 PHE173 VAL174 PRO175 TRP176 PRO177 SER178 LYS179 GLY180 LYS181 THR182 ASP183 LYS184 GLU185 GLY186 TRP187 TYR188 PRO189 PRO190 GLY191 HIS192 GLY193 ASP194 VAL195 PHE196 PRO197 ALA198 LEU199 MET200 ASN201 SER202 GLY203 LYS204 LEU205 ASP206 THR207 PHE208 LEU209 SER210 GLN211 GLY212 LYS213 GLU214 TYR215 VAL216 PHE217 VAL218 ALA219 ASN220 SER221 ASP222 ASN223 LEU224 GLY225 ALA226 ILE227 VAL228 ASP229 LEU230 THR231 ILE232 LEU233 LYS234 HIS235 LEU236 ILE237 GLN238 ASN239 LYS240 ASN241 GLU242 TYR243 CYS244 MET245 GLU246 VAL247 THR248 PRO249 LYS250 THR251 LEU252 ALA253 ASP254 VAL255 LYS256 GLY257 GLY258 THR259 LEU260 ILE261 SER262 TYR263 GLU264 GLY265 LYS266 VAL267 GLN268 LEU269 LEU270 GLU271 ILE272 ALA273 GLN274 VAL275 PRO276 ASP277 GLU278 HIS279 VAL280 ASN281 GLU282 PHE283 LYS284 SER285 ILE286 GLU287 LYS288 PHE289 LYS290 ILE291 PHE292 ASN293 THR294 ASN295 ASN296 LEU297 TRP298 VAL299 ASN300 LEU301 LYS302 ALA303 ILE304 LYS305 LYS306 LEU307 VAL308 GLU309 ALA310 ASP311 ALA312 LEU313 LYS314 MET315 GLU316 ILE317 ILE318 PRO319 ASN320 PRO321 LYS322 GLU323 VAL324 ASP325 GLY326 VAL327 LYS328 VAL329 LEU330 GLN331 LEU332 GLU333 THR334 ALA335 ALA336 GLY337 ALA338 ALA339 ILE340 ARG341 PHE342 PHE343 ASP344 ASN345 ALA346 ILE347 GLY348 VAL349 ASN350 VAL351 PRO352 ARG353 SER354 ARG355 PHE356 LEU357 PRO358 VAL359 LYS360 ALA361 SER362 SER363 ASP364 LEU365 LEU366 LEU367 VAL368 GLN369 SER370 ASP371 LEU372 TYR373 THR374 LEU375 VAL376 ASP377 GLY378 PHE379 VAL380 THR381 ARG382 ASN383 LYS384 ALA385 ARG386 THR387 ASN388 PRO389 SER390 ASN391 PRO392 SER393 ILE394 GLU395 LEU396 GLY397 PRO398 GLU399 PHE400 LYS401 LYS402 VAL403 ALA404 THR405 PHE406 LEU407 SER408 ARG409 PHE410 LYS411 SER412 ILE413 PRO414 SER415 ILE416 VAL417 GLU418 LEU419 ASP420 SER421 LEU422 LYS423 VAL424 SER425 GLY426 ASP427 VAL428 TRP429 PHE430 GLY431 SER432 SER433 ILE434 VAL435 LEU436 LYS437 GLY438 LYS439 VAL440 THR441 VAL442 ALA443 ALA444 LYS445 SER446 GLY447 VAL448 LYS449 LEU450 GLU451 ILE452 PRO453 ASP454 ARG455 ALA456 VAL457 VAL458 GLU459 ASN460 LYS461 ASN462 ILE463 ASN464 GLY465 PRO466 GLU467 ASP468 LEU469
Ligands
Unit 3 DMS900 UPG901
Unit 4 UPG902
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany