2HZV - Sequence, Chains, Asymmetric and Biological Units

• Title: NIKR-OPERATOR DNA COMPLEX
• Keywords: NICKEL, TRANSCRIPTION FACTOR, PROTEIN-DNA COMPLEX, RIBBON- HELIX-HELIX, METAL BINDING PROTEIN/DNA COMPLEX
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	2HZV	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Other macromolecule	5'- D(*AP*GP*TP*AP*TP*GP*AP*CP*GP*AP*AP*TP*AP*CP*TP*TP*AP*AP*AP *AP*TP*CP*GP*TP*CP*AP*TP*AP*CP*T)-3'	I	30	612	0
2	Other macromolecule	5'- D(*AP*GP*TP*AP*TP*GP*AP*CP*GP*AP*TP*TP*TP*TP*AP*AP*GP*TP*AP *TP*TP*CP*GP*TP*CP*AP*TP*AP*CP*T)-3'	J	30	612	0
3	Other macromolecule	5'- D(*AP*GP*TP*AP*TP*GP*AP*CP*GP*AP*AP*TP*AP*CP*TP*TP*AP*AP*AP *AP*TP*CP*GP*TP*CP*AP*TP*AP*CP*T)-3'	K	30	612	0
4	Other macromolecule	5'- D(*AP*GP*TP*AP*TP*GP*AP*CP*GP*AP*TP*TP*TP*TP*AP*AP*GP*TP*AP *TP*TP*CP*GP*TP*CP*AP*TP*AP*CP*T)-3'	L	30	612	0
5	Protein	NICKEL-RESPONSIVE REGULATOR	A	131	965	16
6	Protein	NICKEL-RESPONSIVE REGULATOR	B	131	1015	16
7	Protein	NICKEL-RESPONSIVE REGULATOR	C	131	955	16
8	Protein	NICKEL-RESPONSIVE REGULATOR	D	131	1011	16
9	Protein	NICKEL-RESPONSIVE REGULATOR	E	131	965	16
10	Protein	NICKEL-RESPONSIVE REGULATOR	F	131	1015	16
11	Protein	NICKEL-RESPONSIVE REGULATOR	G	131	969	16
12	Protein	NICKEL-RESPONSIVE REGULATOR	H	131	1011	16
13	Ligand	NICKEL-RESPONSIVE REGULATOR	D	1	0	1
14	Ligand	NICKEL-RESPONSIVE REGULATOR	A	1	0	1
15	Ligand	NICKEL-RESPONSIVE REGULATOR	C	1	0	1
16	Ligand	NICKEL-RESPONSIVE REGULATOR	D	1	0	1
17	Ligand	NICKEL-RESPONSIVE REGULATOR	F	1	0	1
18	Ligand	NICKEL-RESPONSIVE REGULATOR	E	1	0	1
19	Ligand	NICKEL-RESPONSIVE REGULATOR	G	1	0	1
20	Ligand	NICKEL-RESPONSIVE REGULATOR	H	1	0	1
21	Ligand	NICKEL-RESPONSIVE REGULATOR	A	1	0	1
22	Ligand	NICKEL-RESPONSIVE REGULATOR	C	1	0	1
23	Ligand	NICKEL-RESPONSIVE REGULATOR	E	1	0	1
24	Ligand	NICKEL-RESPONSIVE REGULATOR	G	1	0	1
25	Ligand	NICKEL-RESPONSIVE REGULATOR	H	1	0	1
26	Ligand	NICKEL-RESPONSIVE REGULATOR	E	1	0	1
27	Ligand	NICKEL-RESPONSIVE REGULATOR	G	1	0	1
28	Ligand	NICKEL-RESPONSIVE REGULATOR	F	1	0	1
29	Ligand	NICKEL-RESPONSIVE REGULATOR	A	1	0	1
30	Ligand	NICKEL-RESPONSIVE REGULATOR	B	1	0	1
31	Ligand	NICKEL-RESPONSIVE REGULATOR	C	1	0	1
total				1187	10354	147

Proteins

Unit 5	MSE 1 GLN 2 ARG 3 VAL 4 THR 5 ILE 6 THR 7 LEU 8 ASP 9 ASP 10 ASP 11 LEU 12 LEU 13 GLU 14 THR 15 LEU 16 ASP 17 SER 18 LEU 19 SER 20 GLN 21 ARG 22 ARG 23 GLY 24 TYR 25 ASN 26 ASN 27 ARG 28 SER 29 GLU 30 ALA 31 ILE 32 ARG 33 ASP 34 ILE 35 LEU 36 ARG 37 SER 38 ALA 39 LEU 40 ALA 41 GLN 42 GLU 43 ALA 44 THR 45 GLN 46 GLN 47 HIS 48 GLY 49 THR 50 GLN 51 GLY 52 PHE 53 ALA 54 VAL 55 LEU 56 SER 57 TYR 58 VAL 59 TYR 60 GLU 61 HIS 62 GLU 63 LYS 64 ARG 65 ASP 66 LEU 67 ALA 68 SER 69 ARG 70 ILE 71 VAL 72 SER 73 THR 74 GLN 75 HIS 76 HIS 77 HIS 78 HIS 79 ASP 80 LEU 81 SER 82 VAL 83 ALA 84 THR 85 LEU 86 HIS 87 VAL 88 HIS 89 ILE 90 ASN 91 HIS 92 ASP 93 ASP 94 CYS 95 LEU 96 GLU 97 ILE 98 ALA 99 VAL 100 LEU 101 LYS 102 GLY 103 ASP 104 MSE 105 GLY 106 ASP 107 VAL 108 GLN 109 HIS 110 PHE 111 ALA 112 ASP 113 ASP 114 VAL 115 ILE 116 ALA 117 GLN 118 ARG 119 GLY 120 VAL 121 ARG 122 HIS 123 GLY 124 HIS 125 LEU 126 GLN 127 CYS 128 LEU 129 PRO 130 LYS 131
Unit 6	MSE 1 GLN 2 ARG 3 VAL 4 THR 5 ILE 6 THR 7 LEU 8 ASP 9 ASP 10 ASP 11 LEU 12 LEU 13 GLU 14 THR 15 LEU 16 ASP 17 SER 18 LEU 19 SER 20 GLN 21 ARG 22 ARG 23 GLY 24 TYR 25 ASN 26 ASN 27 ARG 28 SER 29 GLU 30 ALA 31 ILE 32 ARG 33 ASP 34 ILE 35 LEU 36 ARG 37 SER 38 ALA 39 LEU 40 ALA 41 GLN 42 GLU 43 ALA 44 THR 45 GLN 46 GLN 47 HIS 48 GLY 49 THR 50 GLN 51 GLY 52 PHE 53 ALA 54 VAL 55 LEU 56 SER 57 TYR 58 VAL 59 TYR 60 GLU 61 HIS 62 GLU 63 LYS 64 ARG 65 ASP 66 LEU 67 ALA 68 SER 69 ARG 70 ILE 71 VAL 72 SER 73 THR 74 GLN 75 HIS 76 HIS 77 HIS 78 HIS 79 ASP 80 LEU 81 SER 82 VAL 83 ALA 84 THR 85 LEU 86 HIS 87 VAL 88 HIS 89 ILE 90 ASN 91 HIS 92 ASP 93 ASP 94 CYS 95 LEU 96 GLU 97 ILE 98 ALA 99 VAL 100 LEU 101 LYS 102 GLY 103 ASP 104 MSE 105 GLY 106 ASP 107 VAL 108 GLN 109 HIS 110 PHE 111 ALA 112 ASP 113 ASP 114 VAL 115 ILE 116 ALA 117 GLN 118 ARG 119 GLY 120 VAL 121 ARG 122 HIS 123 GLY 124 HIS 125 LEU 126 GLN 127 CYS 128 LEU 129 PRO 130 LYS 131
Unit 7	MSE 1 GLN 2 ARG 3 VAL 4 THR 5 ILE 6 THR 7 LEU 8 ASP 9 ASP 10 ASP 11 LEU 12 LEU 13 GLU 14 THR 15 LEU 16 ASP 17 SER 18 LEU 19 SER 20 GLN 21 ARG 22 ARG 23 GLY 24 TYR 25 ASN 26 ASN 27 ARG 28 SER 29 GLU 30 ALA 31 ILE 32 ARG 33 ASP 34 ILE 35 LEU 36 ARG 37 SER 38 ALA 39 LEU 40 ALA 41 GLN 42 GLU 43 ALA 44 THR 45 GLN 46 GLN 47 HIS 48 GLY 49 THR 50 GLN 51 GLY 52 PHE 53 ALA 54 VAL 55 LEU 56 SER 57 TYR 58 VAL 59 TYR 60 GLU 61 HIS 62 GLU 63 LYS 64 ARG 65 ASP 66 LEU 67 ALA 68 SER 69 ARG 70 ILE 71 VAL 72 SER 73 THR 74 GLN 75 HIS 76 HIS 77 HIS 78 HIS 79 ASP 80 LEU 81 SER 82 VAL 83 ALA 84 THR 85 LEU 86 HIS 87 VAL 88 HIS 89 ILE 90 ASN 91 HIS 92 ASP 93 ASP 94 CYS 95 LEU 96 GLU 97 ILE 98 ALA 99 VAL 100 LEU 101 LYS 102 GLY 103 ASP 104 MSE 105 GLY 106 ASP 107 VAL 108 GLN 109 HIS 110 PHE 111 ALA 112 ASP 113 ASP 114 VAL 115 ILE 116 ALA 117 GLN 118 ARG 119 GLY 120 VAL 121 ARG 122 HIS 123 GLY 124 HIS 125 LEU 126 GLN 127 CYS 128 LEU 129 PRO 130 LYS 131
Unit 8	MSE 1 GLN 2 ARG 3 VAL 4 THR 5 ILE 6 THR 7 LEU 8 ASP 9 ASP 10 ASP 11 LEU 12 LEU 13 GLU 14 THR 15 LEU 16 ASP 17 SER 18 LEU 19 SER 20 GLN 21 ARG 22 ARG 23 GLY 24 TYR 25 ASN 26 ASN 27 ARG 28 SER 29 GLU 30 ALA 31 ILE 32 ARG 33 ASP 34 ILE 35 LEU 36 ARG 37 SER 38 ALA 39 LEU 40 ALA 41 GLN 42 GLU 43 ALA 44 THR 45 GLN 46 GLN 47 HIS 48 GLY 49 THR 50 GLN 51 GLY 52 PHE 53 ALA 54 VAL 55 LEU 56 SER 57 TYR 58 VAL 59 TYR 60 GLU 61 HIS 62 GLU 63 LYS 64 ARG 65 ASP 66 LEU 67 ALA 68 SER 69 ARG 70 ILE 71 VAL 72 SER 73 THR 74 GLN 75 HIS 76 HIS 77 HIS 78 HIS 79 ASP 80 LEU 81 SER 82 VAL 83 ALA 84 THR 85 LEU 86 HIS 87 VAL 88 HIS 89 ILE 90 ASN 91 HIS 92 ASP 93 ASP 94 CYS 95 LEU 96 GLU 97 ILE 98 ALA 99 VAL 100 LEU 101 LYS 102 GLY 103 ASP 104 MSE 105 GLY 106 ASP 107 VAL 108 GLN 109 HIS 110 PHE 111 ALA 112 ASP 113 ASP 114 VAL 115 ILE 116 ALA 117 GLN 118 ARG 119 GLY 120 VAL 121 ARG 122 HIS 123 GLY 124 HIS 125 LEU 126 GLN 127 CYS 128 LEU 129 PRO 130 LYS 131
Unit 9	MSE 1 GLN 2 ARG 3 VAL 4 THR 5 ILE 6 THR 7 LEU 8 ASP 9 ASP 10 ASP 11 LEU 12 LEU 13 GLU 14 THR 15 LEU 16 ASP 17 SER 18 LEU 19 SER 20 GLN 21 ARG 22 ARG 23 GLY 24 TYR 25 ASN 26 ASN 27 ARG 28 SER 29 GLU 30 ALA 31 ILE 32 ARG 33 ASP 34 ILE 35 LEU 36 ARG 37 SER 38 ALA 39 LEU 40 ALA 41 GLN 42 GLU 43 ALA 44 THR 45 GLN 46 GLN 47 HIS 48 GLY 49 THR 50 GLN 51 GLY 52 PHE 53 ALA 54 VAL 55 LEU 56 SER 57 TYR 58 VAL 59 TYR 60 GLU 61 HIS 62 GLU 63 LYS 64 ARG 65 ASP 66 LEU 67 ALA 68 SER 69 ARG 70 ILE 71 VAL 72 SER 73 THR 74 GLN 75 HIS 76 HIS 77 HIS 78 HIS 79 ASP 80 LEU 81 SER 82 VAL 83 ALA 84 THR 85 LEU 86 HIS 87 VAL 88 HIS 89 ILE 90 ASN 91 HIS 92 ASP 93 ASP 94 CYS 95 LEU 96 GLU 97 ILE 98 ALA 99 VAL 100 LEU 101 LYS 102 GLY 103 ASP 104 MSE 105 GLY 106 ASP 107 VAL 108 GLN 109 HIS 110 PHE 111 ALA 112 ASP 113 ASP 114 VAL 115 ILE 116 ALA 117 GLN 118 ARG 119 GLY 120 VAL 121 ARG 122 HIS 123 GLY 124 HIS 125 LEU 126 GLN 127 CYS 128 LEU 129 PRO 130 LYS 131
Unit 10	MSE 1 GLN 2 ARG 3 VAL 4 THR 5 ILE 6 THR 7 LEU 8 ASP 9 ASP 10 ASP 11 LEU 12 LEU 13 GLU 14 THR 15 LEU 16 ASP 17 SER 18 LEU 19 SER 20 GLN 21 ARG 22 ARG 23 GLY 24 TYR 25 ASN 26 ASN 27 ARG 28 SER 29 GLU 30 ALA 31 ILE 32 ARG 33 ASP 34 ILE 35 LEU 36 ARG 37 SER 38 ALA 39 LEU 40 ALA 41 GLN 42 GLU 43 ALA 44 THR 45 GLN 46 GLN 47 HIS 48 GLY 49 THR 50 GLN 51 GLY 52 PHE 53 ALA 54 VAL 55 LEU 56 SER 57 TYR 58 VAL 59 TYR 60 GLU 61 HIS 62 GLU 63 LYS 64 ARG 65 ASP 66 LEU 67 ALA 68 SER 69 ARG 70 ILE 71 VAL 72 SER 73 THR 74 GLN 75 HIS 76 HIS 77 HIS 78 HIS 79 ASP 80 LEU 81 SER 82 VAL 83 ALA 84 THR 85 LEU 86 HIS 87 VAL 88 HIS 89 ILE 90 ASN 91 HIS 92 ASP 93 ASP 94 CYS 95 LEU 96 GLU 97 ILE 98 ALA 99 VAL 100 LEU 101 LYS 102 GLY 103 ASP 104 MSE 105 GLY 106 ASP 107 VAL 108 GLN 109 HIS 110 PHE 111 ALA 112 ASP 113 ASP 114 VAL 115 ILE 116 ALA 117 GLN 118 ARG 119 GLY 120 VAL 121 ARG 122 HIS 123 GLY 124 HIS 125 LEU 126 GLN 127 CYS 128 LEU 129 PRO 130 LYS 131
Unit 11	MSE 1 GLN 2 ARG 3 VAL 4 THR 5 ILE 6 THR 7 LEU 8 ASP 9 ASP 10 ASP 11 LEU 12 LEU 13 GLU 14 THR 15 LEU 16 ASP 17 SER 18 LEU 19 SER 20 GLN 21 ARG 22 ARG 23 GLY 24 TYR 25 ASN 26 ASN 27 ARG 28 SER 29 GLU 30 ALA 31 ILE 32 ARG 33 ASP 34 ILE 35 LEU 36 ARG 37 SER 38 ALA 39 LEU 40 ALA 41 GLN 42 GLU 43 ALA 44 THR 45 GLN 46 GLN 47 HIS 48 GLY 49 THR 50 GLN 51 GLY 52 PHE 53 ALA 54 VAL 55 LEU 56 SER 57 TYR 58 VAL 59 TYR 60 GLU 61 HIS 62 GLU 63 LYS 64 ARG 65 ASP 66 LEU 67 ALA 68 SER 69 ARG 70 ILE 71 VAL 72 SER 73 THR 74 GLN 75 HIS 76 HIS 77 HIS 78 HIS 79 ASP 80 LEU 81 SER 82 VAL 83 ALA 84 THR 85 LEU 86 HIS 87 VAL 88 HIS 89 ILE 90 ASN 91 HIS 92 ASP 93 ASP 94 CYS 95 LEU 96 GLU 97 ILE 98 ALA 99 VAL 100 LEU 101 LYS 102 GLY 103 ASP 104 MSE 105 GLY 106 ASP 107 VAL 108 GLN 109 HIS 110 PHE 111 ALA 112 ASP 113 ASP 114 VAL 115 ILE 116 ALA 117 GLN 118 ARG 119 GLY 120 VAL 121 ARG 122 HIS 123 GLY 124 HIS 125 LEU 126 GLN 127 CYS 128 LEU 129 PRO 130 LYS 131
Unit 12	MSE 1 GLN 2 ARG 3 VAL 4 THR 5 ILE 6 THR 7 LEU 8 ASP 9 ASP 10 ASP 11 LEU 12 LEU 13 GLU 14 THR 15 LEU 16 ASP 17 SER 18 LEU 19 SER 20 GLN 21 ARG 22 ARG 23 GLY 24 TYR 25 ASN 26 ASN 27 ARG 28 SER 29 GLU 30 ALA 31 ILE 32 ARG 33 ASP 34 ILE 35 LEU 36 ARG 37 SER 38 ALA 39 LEU 40 ALA 41 GLN 42 GLU 43 ALA 44 THR 45 GLN 46 GLN 47 HIS 48 GLY 49 THR 50 GLN 51 GLY 52 PHE 53 ALA 54 VAL 55 LEU 56 SER 57 TYR 58 VAL 59 TYR 60 GLU 61 HIS 62 GLU 63 LYS 64 ARG 65 ASP 66 LEU 67 ALA 68 SER 69 ARG 70 ILE 71 VAL 72 SER 73 THR 74 GLN 75 HIS 76 HIS 77 HIS 78 HIS 79 ASP 80 LEU 81 SER 82 VAL 83 ALA 84 THR 85 LEU 86 HIS 87 VAL 88 HIS 89 ILE 90 ASN 91 HIS 92 ASP 93 ASP 94 CYS 95 LEU 96 GLU 97 ILE 98 ALA 99 VAL 100 LEU 101 LYS 102 GLY 103 ASP 104 MSE 105 GLY 106 ASP 107 VAL 108 GLN 109 HIS 110 PHE 111 ALA 112 ASP 113 ASP 114 VAL 115 ILE 116 ALA 117 GLN 118 ARG 119 GLY 120 VAL 121 ARG 122 HIS 123 GLY 124 HIS 125 LEU 126 GLN 127 CYS 128 LEU 129 PRO 130 LYS 131

Other macromolecules

Unit 1	DA 1 DG 2 DT 3 DA 4 DT 5 DG 6 DA 7 DC 8 DG 9 DA 10 DA 11 DT 12 DA 13 DC 14 DT 15 DT 16 DA 17 DA 18 DA 19 DA 20 DT 21 DC 22 DG 23 DT 24 DC 25 DA 26 DT 27 DA 28 DC 29 DT 30
Unit 2	DA 1 DG 2 DT 3 DA 4 DT 5 DG 6 DA 7 DC 8 DG 9 DA 10 DT 11 DT 12 DT 13 DT 14 DA 15 DA 16 DG 17 DT 18 DA 19 DT 20 DT 21 DC 22 DG 23 DT 24 DC 25 DA 26 DT 27 DA 28 DC 29 DT 30
Unit 3	DA 1 DG 2 DT 3 DA 4 DT 5 DG 6 DA 7 DC 8 DG 9 DA 10 DA 11 DT 12 DA 13 DC 14 DT 15 DT 16 DA 17 DA 18 DA 19 DA 20 DT 21 DC 22 DG 23 DT 24 DC 25 DA 26 DT 27 DA 28 DC 29 DT 30
Unit 4	DA 1 DG 2 DT 3 DA 4 DT 5 DG 6 DA 7 DC 8 DG 9 DA 10 DT 11 DT 12 DT 13 DT 14 DA 15 DA 16 DG 17 DT 18 DA 19 DT 20 DT 21 DC 22 DG 23 DT 24 DC 25 DA 26 DT 27 DA 28 DC 29 DT 30

Ligands

Unit 13	NI 301
Unit 14	NI 302
Unit 15	NI 303
Unit 16	NI 304
Unit 17	NI 305
Unit 18	NI 306
Unit 19	NI 307
Unit 20	NI 308
Unit 21	K 401
Unit 22	K 402
Unit 23	K 403
Unit 24	K 404
Unit 25	K 405
Unit 26	K 406
Unit 27	K 407
Unit 28	K 408
Unit 29	K 409
Unit 30	K 410
Unit 31	K 411