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Sequence, Chains, Asymmetric and Biological Units

Title STRUCTURE OF THE MEDIATOR HEAD SUBCOMPLEX MED18/20
Keywords BETA BARREL, CHANNEL, TRANSCRIPTION
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   2HZM     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   RNA POLYMERASE II MEDIATOR COMPLEX SUBUNIT 20  A 205 1574 0
2  Protein   RNA POLYMERASE II MEDIATOR COMPLEX SUBUNIT 18  B 227 1785 0
3  Protein   RNA POLYMERASE II MEDIATOR COMPLEX SUBUNIT 20  C 195 1504 0
4  Protein   RNA POLYMERASE II MEDIATOR COMPLEX SUBUNIT 18  D 233 1820 0
5  Protein   RNA POLYMERASE II MEDIATOR COMPLEX SUBUNIT 20  E 197 1520 0
6  Protein   RNA POLYMERASE II MEDIATOR COMPLEX SUBUNIT 18  F 238 1869 0
7  Protein   RNA POLYMERASE II MEDIATOR COMPLEX SUBUNIT 20  G 196 1511 0
8  Protein   RNA POLYMERASE II MEDIATOR COMPLEX SUBUNIT 18  H 226 1770 0
9  Ligand   RNA POLYMERASE II MEDIATOR COMPLEX SUBUNIT 20  A 1 0 5
10 Water     229 0 229
total       1947 13353 234
Proteins
Unit 1 GLY2 LYS3 SER4 ALA5 VAL6 ILE7 PHE8 VAL9 GLU10 ARG11 ALA12 THR13 PRO14 ALA15 THR16 LEU17 THR18 GLU19 LEU20 LYS21 ASP22 ALA23 LEU24 SER25 ASN26 SER27 ILE28 LEU29 SER30 VAL31 ARG32 ASP33 PRO34 TRP35 SER36 ILE37 ASP38 PHE39 ARG40 THR41 TYR42 ARG43 CYS44 SER45 ILE46 LYS47 ASN48 LEU49 SER54 LYS55 LEU56 MET57 TYR58 SER59 ILE60 THR61 PHE62 HIS63 HIS64 HIS65 GLY66 ARG67 GLN68 THR69 VAL70 LEU71 ILE72 LYS73 ASP74 ASN75 SER76 ALA77 MET78 VAL79 THR80 THR81 ALA82 ALA83 ALA84 ALA85 ASP86 ILE87 PRO88 PRO89 ALA90 LEU91 VAL92 PHE93 ASN94 GLY95 SER96 SER97 THR98 GLY99 VAL100 PRO101 GLU102 SER103 ILE104 ASP105 THR106 ILE107 LEU108 SER109 SER110 LYS111 LEU112 SER113 ASN114 ILE115 TRP116 MET117 GLN118 ARG119 GLN120 LEU121 ILE122 LYS123 GLY124 ASP125 ALA126 GLY127 GLU128 THR129 LEU130 ILE131 LEU132 ASP133 GLY134 LEU135 THR136 VAL137 ARG138 LEU139 VAL140 ASN141 LEU142 PHE143 SER144 SER145 THR146 GLY147 PHE148 LYS149 GLY150 LEU151 LEU152 ILE153 GLU154 LEU155 GLN156 ALA157 ASP158 GLU159 ALA160 GLY161 GLU162 PHE163 GLU164 THR165 LYS166 ILE167 ALA168 GLY169 ILE170 GLU171 GLY172 HIS173 LEU174 ALA175 GLU176 ILE177 ARG178 ALA179 LYS180 GLU181 TYR182 LYS183 THR184 SER185 SER186 ASP187 SER188 LEU189 GLY190 PRO191 ASP192 THR193 SER194 ASN195 GLU196 ILE197 CYS198 ASP199 LEU200 ALA201 TYR202 GLN203 TYR204 VAL205 ARG206 ALA207 LEU208 GLU209 LEU210
Unit 2 VAL2 GLN3 GLN4 LEU5 SER6 LEU7 PHE8 GLY9 SER10 ILE11 GLY12 ASP13 ASP14 GLY15 TYR16 ASP17 LEU18 LEU19 ILE20 SER21 THR22 LEU23 THR24 THR25 ILE26 SER27 GLY28 ASN29 PRO30 PRO31 LEU32 LEU33 TYR34 ASN35 SER36 LEU37 CYS38 THR39 VAL40 TRP41 LYS42 PRO43 ASN44 PRO45 SER46 TYR47 ASP48 VAL49 GLU50 PRO61 ASN62 ARG63 ILE64 LYS65 LEU66 SER67 LYS68 GLU69 VAL70 PRO71 PHE72 SER73 TYR74 LEU75 ILE76 ASP77 GLU78 LYS83 PRO84 LEU85 ASN86 PHE87 ARG88 ILE89 LEU90 LYS91 SER92 PHE93 GLU159 SER160 CYS161 SER162 PRO163 TRP164 SER165 LEU166 GLN167 ILE168 SER169 ASP170 ILE171 ARG178 SER179 VAL180 SER181 MET182 GLN183 THR184 ILE185 ALA186 GLU187 THR188 ILE189 ILE190 LEU191 SER192 SER193 ALA194 GLY195 LYS196 ASN197 SER198 SER199 VAL200 SER201 SER202 LEU203 MET204 ASN205 GLY206 LEU207 GLY208 TYR209 VAL210 PHE211 GLU212 PHE213 GLN214 TYR215 LEU216 THR217 ILE218 GLY219 VAL220 LYS221 PHE222 PHE223 MET224 LYS225 HIS226 GLY227 LEU228 ILE229 LEU230 GLU231 LEU232 GLN233 LYS234 ILE235 TRP236 GLN237 ILE238 GLU239 GLU240 ALA241 GLY242 ASN243 SER244 GLN245 ILE246 THR247 SER248 GLY249 GLY250 PHE251 LEU252 LEU253 LYS254 ALA255 TYR256 ILE257 ASN258 VAL259 SER260 ARG261 GLY262 THR263 ASP264 ILE265 ASP266 ARG267 ILE268 ASN269 TYR270 THR271 GLU272 THR273 VAL274 LEU275 MET276 ASN277 LEU278 LYS279 LYS280 GLU281 LEU282 GLN283 GLY284 TYR285 ILE286 GLU287 LEU288 SER289 VAL290 PRO291 ASP292 ARG293 GLN294 SER295 MET296 ASP297 SER298 ARG299 VAL300 ALA301 HIS302 GLY303 ASN304 ILE305 LEU306 ILE307 ALA308 ALA309 ALA310 LEU311 GLU312 HIS313
Unit 3 LYS3 SER4 ALA5 VAL6 ILE7 PHE8 VAL9 GLU10 ARG11 ALA12 THR13 PRO14 ALA15 THR16 LEU17 THR18 GLU19 LEU20 LYS21 ASP22 ALA23 LEU24 SER25 ASN26 SER27 ILE28 LEU29 SER30 VAL31 ARG32 ASP33 PRO34 TRP35 SER36 ILE37 ASP38 PHE39 ARG40 THR41 TYR42 ARG43 CYS44 SER45 ILE46 SER54 LYS55 LEU56 MET57 TYR58 SER59 ILE60 THR61 PHE62 HIS63 HIS64 HIS65 GLY66 ARG67 GLN68 THR69 VAL70 LEU71 ILE72 LYS73 ASP74 ASN75 SER76 ALA77 MET78 VAL79 THR80 THR81 ALA82 ALA83 ALA84 ALA85 ASP86 ILE87 PRO88 PRO89 ALA90 LEU91 VAL92 PHE93 ASN94 GLY95 SER96 SER97 THR98 GLY99 VAL100 PRO101 GLU102 SER103 ILE104 ASP105 THR106 ILE107 LEU108 SER109 SER110 LYS111 LEU112 SER113 ASN114 ILE115 TRP116 MET117 GLN118 ARG119 GLN120 LEU121 ILE122 LYS123 GLY124 ASP125 ALA126 GLY127 GLU128 THR129 LEU130 ILE131 LEU132 ASP133 GLY134 LEU135 THR136 VAL137 ARG138 LEU139 VAL140 ASN141 LEU142 PHE143 SER144 SER145 THR146 GLY147 PHE148 LYS149 GLY150 LEU151 LEU152 ILE153 GLU154 LEU155 GLN156 ALA157 ASP158 GLU159 ALA160 GLY161 GLU162 PHE163 GLU164 THR165 LYS166 ILE167 ALA168 GLY169 ILE170 GLU171 GLY172 HIS173 LEU174 ALA175 GLU176 ILE177 ARG178 ALA179 LYS180 GLU181 TYR182 LYS183 THR184 SER185 SER186 ASP187 SER188 LEU189 ASN195 GLU196 ILE197 CYS198 ASP199 LEU200 ALA201 TYR202 GLN203 TYR204 VAL205 ARG206 ALA207 LEU208 GLU209
Unit 4 VAL2 GLN3 GLN4 LEU5 SER6 LEU7 PHE8 GLY9 SER10 ILE11 GLY12 ASP13 ASP14 GLY15 TYR16 ASP17 LEU18 LEU19 ILE20 SER21 THR22 LEU23 THR24 THR25 ILE26 SER27 GLY28 ASN29 PRO30 PRO31 LEU32 LEU33 TYR34 ASN35 SER36 LEU37 CYS38 THR39 VAL40 TRP41 LYS42 PRO43 ASN44 PRO45 SER46 TYR47 PRO61 ASN62 ARG63 ILE64 LYS65 LEU66 SER67 LYS68 GLU69 VAL70 PRO71 PHE72 SER73 TYR74 LEU75 ILE76 ASP77 GLU78 THR79 MET80 MET81 ASP82 LYS83 PRO84 LEU85 ASN86 PHE87 ARG88 ILE89 LEU90 LYS91 SER92 PHE93 SER160 CYS161 SER162 PRO163 TRP164 SER165 LEU166 GLN167 ILE168 SER169 ASP170 ILE171 PRO172 ALA173 ALA174 GLY175 ASN176 ASN177 ARG178 SER179 VAL180 SER181 MET182 GLN183 THR184 ILE185 ALA186 GLU187 THR188 ILE189 ILE190 LEU191 SER192 SER193 ALA194 GLY195 LYS196 ASN197 SER198 SER199 VAL200 SER201 SER202 LEU203 MET204 ASN205 GLY206 LEU207 GLY208 TYR209 VAL210 PHE211 GLU212 PHE213 GLN214 TYR215 LEU216 THR217 ILE218 GLY219 VAL220 LYS221 PHE222 PHE223 MET224 LYS225 HIS226 GLY227 LEU228 ILE229 LEU230 GLU231 LEU232 GLN233 LYS234 ILE235 TRP236 GLN237 ILE238 GLU239 GLU240 ALA241 GLY242 ASN243 SER244 GLN245 ILE246 THR247 SER248 GLY249 GLY250 PHE251 LEU252 LEU253 LYS254 ALA255 TYR256 ILE257 ASN258 VAL259 SER260 ARG261 GLY262 THR263 ASP264 ILE265 ASP266 ARG267 ILE268 ASN269 TYR270 THR271 GLU272 THR273 VAL274 LEU275 MET276 ASN277 LEU278 LYS279 LYS280 GLU281 LEU282 GLN283 GLY284 TYR285 ILE286 GLU287 LEU288 SER289 VAL290 PRO291 ASP292 ARG293 GLN294 SER295 MET296 ASP297 SER298 ARG299 VAL300 ALA301 HIS302 GLY303 ASN304 ILE305 LEU306 ILE307 ALA308 ALA309 ALA310 LEU311 GLU312 HIS313
Unit 5 GLY2 LYS3 SER4 ALA5 VAL6 ILE7 PHE8 VAL9 GLU10 ARG11 ALA12 THR13 PRO14 ALA15 THR16 LEU17 THR18 GLU19 LEU20 LYS21 ASP22 ALA23 LEU24 SER25 ASN26 SER27 ILE28 LEU29 SER30 VAL31 ARG32 ASP33 PRO34 TRP35 SER36 ILE37 ASP38 PHE39 ARG40 THR41 TYR42 ARG43 CYS44 SER45 ILE46 LYS47 ASN48 LYS55 LEU56 MET57 TYR58 SER59 ILE60 THR61 PHE62 HIS63 HIS64 HIS65 GLY66 ARG67 GLN68 THR69 VAL70 LEU71 ILE72 LYS73 ASP74 ASN75 SER76 ALA77 MET78 VAL79 THR80 THR81 ALA82 ALA83 ALA84 ALA85 ASP86 ILE87 PRO88 PRO89 ALA90 LEU91 VAL92 PHE93 ASN94 GLY95 SER96 SER97 THR98 GLY99 VAL100 PRO101 GLU102 SER103 ILE104 ASP105 THR106 ILE107 LEU108 SER109 SER110 LYS111 LEU112 SER113 ASN114 ILE115 TRP116 MET117 GLN118 ARG119 GLN120 LEU121 ILE122 LYS123 GLY124 ASP125 ALA126 GLY127 GLU128 THR129 LEU130 ILE131 LEU132 ASP133 GLY134 LEU135 THR136 VAL137 ARG138 LEU139 VAL140 ASN141 LEU142 PHE143 SER144 SER145 THR146 GLY147 PHE148 LYS149 GLY150 LEU151 LEU152 ILE153 GLU154 LEU155 GLN156 ALA157 ASP158 GLU159 ALA160 GLY161 GLU162 PHE163 GLU164 THR165 LYS166 ILE167 ALA168 GLY169 ILE170 GLU171 GLY172 HIS173 LEU174 ALA175 GLU176 ILE177 ARG178 ALA179 LYS180 GLU181 TYR182 LYS183 THR184 SER185 SER186 ASP187 SER188 ASN195 GLU196 ILE197 CYS198 ASP199 LEU200 ALA201 TYR202 GLN203 TYR204 VAL205 ARG206 ALA207 LEU208 GLU209 LEU210
Unit 6 VAL2 GLN3 GLN4 LEU5 SER6 LEU7 PHE8 GLY9 SER10 ILE11 GLY12 ASP13 ASP14 GLY15 TYR16 ASP17 LEU18 LEU19 ILE20 SER21 THR22 LEU23 THR24 THR25 ILE26 SER27 GLY28 ASN29 PRO30 PRO31 LEU32 LEU33 TYR34 ASN35 SER36 LEU37 CYS38 THR39 VAL40 TRP41 LYS42 PRO43 ASN44 PRO45 SER46 TYR47 PRO61 ASN62 ARG63 ILE64 LYS65 LEU66 SER67 LYS68 GLU69 VAL70 PRO71 PHE72 SER73 TYR74 LEU75 ILE76 ASP77 GLU78 THR79 MET80 MET81 ASP82 LYS83 PRO84 LEU85 ASN86 PHE87 ARG88 ILE89 LEU90 LYS91 SER92 PHE93 THR94 ASN95 ASP96 LYS97 ILE98 PRO99 LEU100 ASN101 TYR102 ALA103 MET104 GLU159 SER160 CYS161 SER162 PRO163 TRP164 SER165 LEU166 GLN167 ILE168 SER169 ASP170 ILE171 SER179 VAL180 SER181 MET182 GLN183 THR184 ILE185 ALA186 GLU187 THR188 ILE189 ILE190 LEU191 SER192 SER193 ALA194 GLY195 LYS196 ASN197 SER198 SER199 VAL200 SER201 SER202 LEU203 MET204 ASN205 GLY206 LEU207 GLY208 TYR209 VAL210 PHE211 GLU212 PHE213 GLN214 TYR215 LEU216 THR217 ILE218 GLY219 VAL220 LYS221 PHE222 PHE223 MET224 LYS225 HIS226 GLY227 LEU228 ILE229 LEU230 GLU231 LEU232 GLN233 LYS234 ILE235 TRP236 GLN237 ILE238 GLU239 GLU240 ALA241 GLY242 ASN243 SER244 GLN245 ILE246 THR247 SER248 GLY249 GLY250 PHE251 LEU252 LEU253 LYS254 ALA255 TYR256 ILE257 ASN258 VAL259 SER260 ARG261 GLY262 THR263 ASP264 ILE265 ASP266 ARG267 ILE268 ASN269 TYR270 THR271 GLU272 THR273 VAL274 LEU275 MET276 ASN277 LEU278 LYS279 LYS280 GLU281 LEU282 GLN283 GLY284 TYR285 ILE286 GLU287 LEU288 SER289 VAL290 PRO291 ASP292 ARG293 GLN294 SER295 MET296 ASP297 SER298 ARG299 VAL300 ALA301 HIS302 GLY303 ASN304 ILE305 LEU306 ILE307 ALA308 ALA309 ALA310 LEU311 GLU312 HIS313
Unit 7 GLY2 LYS3 SER4 ALA5 VAL6 ILE7 PHE8 VAL9 GLU10 ARG11 ALA12 THR13 PRO14 ALA15 THR16 LEU17 THR18 GLU19 LEU20 LYS21 ASP22 ALA23 LEU24 SER25 ASN26 SER27 ILE28 LEU29 SER30 VAL31 ARG32 ASP33 PRO34 TRP35 SER36 ILE37 ASP38 PHE39 ARG40 THR41 TYR42 ARG43 CYS44 SER45 ILE46 LYS55 LEU56 MET57 TYR58 SER59 ILE60 THR61 PHE62 HIS63 HIS64 HIS65 GLY66 ARG67 GLN68 THR69 VAL70 LEU71 ILE72 LYS73 ASP74 ASN75 SER76 ALA77 MET78 VAL79 THR80 THR81 ALA82 ALA83 ALA84 ALA85 ASP86 ILE87 PRO88 PRO89 ALA90 LEU91 VAL92 PHE93 ASN94 GLY95 SER96 SER97 THR98 GLY99 VAL100 PRO101 GLU102 SER103 ILE104 ASP105 THR106 ILE107 LEU108 SER109 SER110 LYS111 LEU112 SER113 ASN114 ILE115 TRP116 MET117 GLN118 ARG119 GLN120 LEU121 ILE122 LYS123 GLY124 ASP125 ALA126 GLY127 GLU128 THR129 LEU130 ILE131 LEU132 ASP133 GLY134 LEU135 THR136 VAL137 ARG138 LEU139 VAL140 ASN141 LEU142 PHE143 SER144 SER145 THR146 GLY147 PHE148 LYS149 GLY150 LEU151 LEU152 ILE153 GLU154 LEU155 GLN156 ALA157 ASP158 GLU159 ALA160 GLY161 GLU162 PHE163 GLU164 THR165 LYS166 ILE167 ALA168 GLY169 ILE170 GLU171 GLY172 HIS173 LEU174 ALA175 GLU176 ILE177 ARG178 ALA179 LYS180 GLU181 TYR182 LYS183 THR184 SER185 SER186 ASP187 SER188 LEU189 ASN195 GLU196 ILE197 CYS198 ASP199 LEU200 ALA201 TYR202 GLN203 TYR204 VAL205 ARG206 ALA207 LEU208 GLU209 LEU210
Unit 8 VAL2 GLN3 GLN4 LEU5 SER6 LEU7 PHE8 GLY9 SER10 ILE11 GLY12 ASP13 ASP14 GLY15 TYR16 ASP17 LEU18 LEU19 ILE20 SER21 THR22 LEU23 THR24 THR25 ILE26 SER27 GLY28 ASN29 PRO30 PRO31 LEU32 LEU33 TYR34 ASN35 SER36 LEU37 CYS38 THR39 VAL40 TRP41 LYS42 PRO43 ASN44 PRO45 SER46 TYR47 PRO61 ASN62 ARG63 ILE64 LYS65 LEU66 SER67 LYS68 GLU69 VAL70 PRO71 PHE72 SER73 TYR74 LEU75 ILE76 ASP77 GLU78 THR79 MET80 MET81 ASP82 LYS83 PRO84 LEU85 ASN86 PHE87 ARG88 ILE89 LEU90 LYS91 SER92 PHE93 THR94 ASN95 SER160 CYS161 SER162 PRO163 TRP164 SER165 LEU166 GLN167 ILE168 SER169 ASP170 ILE171 ARG178 SER179 VAL180 SER181 MET182 GLN183 THR184 ILE185 ALA186 GLU187 THR188 ILE189 ILE190 LEU191 SER192 SER193 ALA194 GLY195 LYS196 ASN197 SER198 SER199 VAL200 SER201 SER202 LEU203 MET204 ASN205 GLY206 LEU207 GLY208 TYR209 VAL210 PHE211 GLU212 PHE213 GLN214 TYR215 LEU216 THR217 ILE218 GLY219 VAL220 LYS221 PHE222 PHE223 MET224 LYS225 HIS226 GLY227 LEU228 ILE229 LEU230 GLU231 LEU232 GLN233 LYS234 ILE235 TRP236 GLN237 ILE238 GLU239 GLU240 ALA241 GLY242 ASN243 SER244 GLN245 ILE246 THR247 SER248 GLY249 GLY250 PHE251 LEU252 LEU253 LYS254 ALA255 TYR256 ILE257 ASN258 VAL259 SER260 ARG261 GLY262 THR263 ASP264 ILE265 ASP266 ARG267 ILE268 ASN269 TYR270 THR271 GLU272 THR273 VAL274 LEU275 MET276 ASN277 LEU278 LYS279 LYS280 GLU281 LEU282 GLN283 GLY284 TYR285 ILE286 GLU287 LEU288 SER289 VAL290 PRO291 SER295 MET296 ASP297 SER298 ARG299 VAL300 ALA301 HIS302 GLY303 ASN304 ILE305 LEU306 ILE307 ALA308 ALA309 ALA310 LEU311 GLU312 HIS313
Ligands
Unit 9 PO4211
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany