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Sequence, Chains, Asymmetric and Biological Units

Title STRUCTURE OF RIBOSOMAL PROTEIN L1-MRNA COMPLEX AT 2.1 RESOLUTION.
Keywords RIBOSOMAL PROTEIN L1, MRNA, RNA-PROTEIN COMPLEX, STRUCTURAL PROTEIN/RNA COMPLEX
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   2HW8     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  RNA    B 36 774 0
2  Protein   50S RIBOSOMAL PROTEIN L1  A 228 1718 24
3  Ligand   36-MER  B 1 0 1
4  Ligand   50S RIBOSOMAL PROTEIN L1  A 2 0 7
5 Water     163 0 163
total       430 2492 195

Proteins
Unit 2 PRO1 LYS2 HIS3 GLY4 LYS5 ARG6 TYR7 ARG8 ALA9 LEU10 LEU11 GLU12 LYS13 VAL14 ASP15 PRO16 ASN17 LYS18 ILE19 TYR20 THR21 ILE22 ASP23 GLU24 ALA25 ALA26 HIS27 LEU28 VAL29 LYS30 GLU31 LEU32 ALA33 THR34 ALA35 LYS36 PHE37 ASP38 GLU39 THR40 VAL41 GLU42 VAL43 HIS44 ALA45 LYS46 LEU47 GLY48 ILE49 ASP50 PRO51 ARG52 ARG53 SER54 ASP55 GLN56 ASN57 VAL58 ARG59 GLY60 THR61 VAL62 SER63 LEU64 PRO65 HIS66 GLY67 LEU68 GLY69 LYS70 GLN71 VAL72 ARG73 VAL74 LEU75 ALA76 ILE77 ALA78 LYS79 GLY80 GLU81 LYS82 ILE83 LYS84 GLU85 ALA86 GLU87 GLU88 ALA89 GLY90 ALA91 ASP92 TYR93 VAL94 GLY95 GLY96 GLU97 GLU98 ILE99 ILE100 GLN101 LYS102 ILE103 LEU104 ASP105 GLY106 TRP107 MET108 ASP109 PHE110 ASP111 ALA112 VAL113 VAL114 ALA115 THR116 PRO117 ASP118 VAL119 MSE120 GLY121 ALA122 VAL123 GLY124 SER125 LYS126 MSE127 GLY128 ARG129 ILE130 LEU131 GLY132 PRO133 ARG134 GLY135 LEU136 LEU137 PRO138 ASN139 PRO140 LYS141 ALA142 GLY143 THR144 VAL145 GLY146 PHE147 ASN148 ILE149 GLY150 GLU151 ILE152 ILE153 ARG154 GLU155 ILE156 LYS157 ALA158 GLY159 ARG160 ILE161 GLU162 PHE163 ARG164 ASN165 ASP166 LYS167 THR168 GLY169 ALA170 ILE171 HIS172 ALA173 PRO174 VAL175 GLY176 LYS177 ALA178 SER179 PHE180 PRO181 PRO182 GLU183 LYS184 LEU185 ALA186 ASP187 ASN188 ILE189 ARG190 ALA191 PHE192 ILE193 ARG194 ALA195 LEU196 GLU197 ALA198 HIS199 LYS200 PRO201 GLU202 GLY203 ALA204 LYS205 GLY206 THR207 PHE208 LEU209 ARG210 SER211 VAL212 TYR213 VAL214 THR215 THR216 THR217 MSE218 GLY219 PRO220 SER221 VAL222 ARG223 ILE224 ASN225 PRO226 HIS227 SER228

Nucleic acids
Unit 1 G2 G3 G4 G5 U6 G7 A8 A9 G10 G11 A12 G13 G14 C15 U16 U17 C18 G19 G20 C21 C22 G23 C24 G25 A26 A27 A28 C29 U30 U31 C32 A33 C34 C35 C36 C37

Ligands
Unit 3 MG202
Unit 4 K229 BU1230

Chirality of ribose and phosphate atoms

Check the naming of phosphate and ribose substituents. Recommended for phosphate oxygens and for ribose hydrogens in NMR structures.


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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany