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Title | IHF BOUND TO DOUBLY NICKED DNA | |
Keywords | DNA BENDING, KINK, NICK, PROTEIN-DNA COMPLEX, TRANSCRIPTION/DNA COMPLEX | |
Experiment | X-ray diffraction | |
Number of Models | 1 |
Database | ID code | Status | Coordinate files | ||
Header | Asymmetric unit | Biological unit | |||
PDB | 2HT0 | released | available | available | Quaternary Structure Server |
Unit | Type | Name | Chain ID | Residues | Atoms | Hetatoms |
---|---|---|---|---|---|---|
1 | Other macromolecule | 5'-D(*CP*GP*GP*TP*GP*CP*AP*AP*CP*AP*AP*AP*T)-3' | C | 13 | 265 | 0 |
2 | Other macromolecule | 5'- D(*TP*GP*AP*TP*AP*AP*GP*CP*AP*AP*TP*GP*CP*TP*TP*TP*TP*TP*TP *GP*GP*C)-3' | D | 22 | 449 | 0 |
3 | Other macromolecule | 5'- D(*GP*GP*CP*CP*AP*AP*AP*AP*AP*AP*GP*CP*AP*TP*T)-3' | E | 15 | 307 | 0 |
4 | Other macromolecule | 5'- D(*GP*CP*TP*TP*AP*TP*CP*AP*AP*TP*TP*TP*GP*TP*TP*GP*CP*AP*CP *C)-3' | F | 20 | 402 | 0 |
5 | Protein | INTEGRATION HOST FACTOR ALPHA-SUBUNIT | A | 96 | 769 | 0 |
6 | Protein | INTEGRATION HOST FACTOR BETA-SUBUNIT | B | 93 | 744 | 0 |
7 | Ligand | 5'- D(*GP*CP*TP*TP*AP*TP*CP*AP*AP*TP*TP*TP*GP*TP*TP*GP*CP*AP*CP *C)-3' | F | 1 | 0 | 1 |
8 | Water | 260 | 0 | 260 | ||
total | 520 | 2936 | 261 |
Unit 5 | ALA2 LEU3 THR4 LYS5 ALA6 GLU7 MET8 SER9 GLU10 TYR11 LEU12 PHE13 ASP14 LYS15 LEU16 GLY17 LEU18 SER19 LYS20 ARG21 ASP22 ALA23 LYS24 GLU25 LEU26 VAL27 GLU28 LEU29 PHE30 PHE31 GLU32 GLU33 ILE34 ARG35 ARG36 ALA37 LEU38 GLU39 ASN40 GLY41 GLU42 GLN43 VAL44 LYS45 LEU46 SER47 GLY48 PHE49 GLY50 ASN51 PHE52 ASP53 LEU54 ARG55 ASP56 LYS57 ASN58 GLN59 ARG60 PRO61 GLY62 ARG63 ASN64 PRO65 LYS66 THR67 GLY68 GLU69 ASP70 ILE71 PRO72 ILE73 THR74 ALA75 ARG76 ARG77 VAL78 VAL79 THR80 PHE81 ARG82 PRO83 GLY84 GLN85 LYS86 LEU87 LYS88 SER89 ARG90 VAL91 GLU92 ASN93 ALA94 SER95 PRO96 LYS97 |
Unit 6 | MET1 THR2 LYS3 SER4 GLU5 LEU6 ILE7 GLU8 ARG9 LEU10 ALA11 THR12 GLN13 GLN14 SER15 HIS16 ILE17 PRO18 ALA19 LYS20 THR21 VAL22 GLU23 ASP24 ALA25 VAL26 LYS27 GLU28 MET29 LEU30 GLU31 HIS32 MET33 ALA34 SER35 THR36 LEU37 ALA38 GLN39 GLY40 GLU41 ARG42 ILE43 GLU44 ILE45 ARG46 GLY47 PHE48 GLY49 SER50 PHE51 SER52 LEU53 HIS54 TYR55 ARG56 ALA57 PRO58 ARG59 THR60 GLY61 ARG62 ASN63 PRO64 LYS65 THR66 GLY67 ASP68 LYS69 VAL70 GLU71 LEU72 GLU73 GLY74 LYS75 TYR76 VAL77 PRO78 HIS79 PHE80 LYS81 PRO82 GLY83 LYS84 GLU85 LEU86 ARG87 ASP88 ARG89 ALA90 ASN91 ILE92 TYR93 |
Unit 1 | DT38 DA39 DA40 DA41 DC42 DA43 DA44 DC45 DG46 DT47 DG48 DG49 DC50 |
Unit 2 | DC16 DG17 DG18 DT19 DT20 DT21 DT22 DT23 DT24 DC25 DG26 DT27 DA28 DA29 DC30 DG31 DA32 DA33 DT34 DA35 DG36 DT37 |
Unit 3 | DG15 DG16 DC17 DC18 DA19 DA20 DA21 DA22 DA23 DA24 DG25 DC26 DA27 DT28 DT29 |
Unit 4 | DG30 DC31 DT32 DT33 DA34 DT35 DC36 DA37 DA38 DT39 DT40 DT41 DG42 DT43 DT44 DG45 DC46 DA47 DC48 DC49 |
Unit 7 | CD401 |
Perl script: | PDBscan.pl (15 Sep 2016) |
Author: | Peter Slickers (slickers@leibniz-fli.de), IMB Jena, Germany |