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Sequence, Chains, Asymmetric and Biological Units

Title ALLIINASE FROM ALLIUM SATIVUM (GARLIC)
Keywords CYSTEINE SULPHOXIDE LYASE, ALLIINASE, LYASE
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   2HOX     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   ALLIIN LYASE 1  A 425 3427 0
2  Protein   ALLIIN LYASE 1  B 427 3447 0
3  Protein   ALLIIN LYASE 1  C 425 3427 0
4  Protein   ALLIIN LYASE 1  D 427 3447 0
5  Ligand    E 6 0 69
6  Ligand    F 2 0 24
7  Ligand    G 4 0 49
8  Ligand    H 3 0 38
9  Ligand    I 2 0 28
10  Ligand   ALLIIN LYASE 1  A 5 0 64
11  Ligand   ALLIIN LYASE 1  B 5 0 64
12  Ligand   ALLIIN LYASE 1  C 4 0 50
13  Ligand   ALLIIN LYASE 1  D 2 0 22
14 Water     2669 0 2669
total       4406 13748 3077
Proteins
Unit 1 LYS1 MET2 THR3 TRP4 THR5 MET6 LYS7 ALA8 ALA9 GLU10 GLU11 ALA12 GLU13 ALA14 VAL15 ALA16 ASN17 ILE18 ASN19 CYS20 SER21 GLU22 HIS23 GLY24 ARG25 ALA26 PHE27 LEU28 ASP29 GLY30 ILE31 ILE32 SER33 GLU34 GLY35 SER36 PRO37 LYS38 CYS39 GLU40 CYS41 ASN42 THR43 CYS44 TYR45 THR46 GLY47 PRO48 ASP49 CYS50 SER51 GLU52 LYS53 ILE54 GLN55 GLY56 CYS57 SER58 ALA59 ASP60 VAL61 ALA62 SER63 GLY64 ASP65 GLY66 LEU67 PHE68 LEU69 GLU70 GLU71 TYR72 TRP73 LYS74 GLN75 HIS76 LYS77 GLU78 ALA79 SER80 ALA81 VAL82 LEU83 VAL84 SER85 PRO86 TRP87 HIS88 ARG89 MET90 SER91 TYR92 PHE93 PHE94 ASN95 PRO96 VAL97 SER98 ASN99 PHE100 ILE101 SER102 PHE103 GLU104 LEU105 GLU106 LYS107 THR108 ILE109 LYS110 GLU111 LEU112 HIS113 GLU114 VAL115 VAL116 GLY117 ASN118 ALA119 ALA120 ALA121 LYS122 ASP123 ARG124 TYR125 ILE126 VAL127 PHE128 GLY129 VAL130 GLY131 VAL132 THR133 GLN134 LEU135 ILE136 HIS137 GLY138 LEU139 VAL140 ILE141 SER142 LEU143 SER144 PRO145 ASN146 MET147 THR148 ALA149 THR150 PRO151 ASP152 ALA153 PRO154 GLU155 SER156 LYS157 VAL158 VAL159 ALA160 HIS161 ALA162 PRO163 PHE164 TYR165 PRO166 VAL167 PHE168 ARG169 GLU170 GLN171 THR172 LYS173 TYR174 PHE175 ASP176 LYS177 LYS178 GLY179 TYR180 VAL181 TRP182 ALA183 GLY184 ASN185 ALA186 ALA187 ASN188 TYR189 VAL190 ASN191 VAL192 SER193 ASN194 PRO195 GLU196 GLN197 TYR198 ILE199 GLU200 MET201 VAL202 THR203 SER204 PRO205 ASN206 ASN207 PRO208 GLU209 GLY210 LEU211 LEU212 ARG213 HIS214 ALA215 VAL216 ILE217 LYS218 GLY219 CYS220 LYS221 SER222 ILE223 TYR224 ASP225 MET226 VAL227 TYR228 TYR229 TRP230 PRO231 HIS232 TYR233 THR234 PRO235 ILE236 LYS237 TYR238 LYS239 ALA240 ASP241 GLU242 ASP243 ILE244 LEU245 LEU246 PHE247 THR248 MET249 SER250 LYS251 PHE252 THR253 GLY254 HIS255 SER256 GLY257 SER258 ARG259 PHE260 GLY261 TRP262 ALA263 LEU264 ILE265 LYS266 ASP267 GLU268 SER269 VAL270 TYR271 ASN272 ASN273 LEU274 LEU275 ASN276 TYR277 MET278 THR279 LYS280 ASN281 THR282 GLU283 GLY284 THR285 PRO286 ARG287 GLU288 THR289 GLN290 LEU291 ARG292 SER293 LEU294 LYS295 VAL296 LEU297 LYS298 GLU299 VAL300 VAL301 ALA302 MET303 VAL304 LYS305 THR306 GLN307 LYS308 GLY309 THR310 MET311 ARG312 ASP313 LEU314 ASN315 THR316 PHE317 GLY318 PHE319 LYS320 LYS321 LEU322 ARG323 GLU324 ARG325 TRP326 VAL327 ASN328 ILE329 THR330 ALA331 LEU332 LEU333 ASP334 GLN335 SER336 ASP337 ARG338 PHE339 SER340 TYR341 GLN342 GLU343 LEU344 PRO345 GLN346 SER347 GLU348 TYR349 CYS350 ASN351 TYR352 PHE353 ARG354 ARG355 MET356 ARG357 PRO358 PRO359 SER360 PRO361 SER362 TYR363 ALA364 TRP365 VAL366 LYS367 CYS368 GLU369 TRP370 GLU371 GLU372 ASP373 LYS374 ASP375 CYS376 TYR377 GLN378 THR379 PHE380 GLN381 ASN382 GLY383 ARG384 ILE385 ASN386 THR387 GLN388 ASN389 GLY390 VAL391 GLY392 PHE393 GLU394 ALA395 SER396 SER397 ARG398 TYR399 VAL400 ARG401 LEU402 SER403 LEU404 ILE405 LYS406 THR407 GLN408 ASP409 ASP410 PHE411 ASP412 GLN413 LEU414 MET415 TYR416 TYR417 LEU418 LYS419 ASP420 MET421 VAL422 LYS423 ALA424 LYS425
Unit 2 LYS1 MET2 THR3 TRP4 THR5 MET6 LYS7 ALA8 ALA9 GLU10 GLU11 ALA12 GLU13 ALA14 VAL15 ALA16 ASN17 ILE18 ASN19 CYS20 SER21 GLU22 HIS23 GLY24 ARG25 ALA26 PHE27 LEU28 ASP29 GLY30 ILE31 ILE32 SER33 GLU34 GLY35 SER36 PRO37 LYS38 CYS39 GLU40 CYS41 ASN42 THR43 CYS44 TYR45 THR46 GLY47 PRO48 ASP49 CYS50 SER51 GLU52 LYS53 ILE54 GLN55 GLY56 CYS57 SER58 ALA59 ASP60 VAL61 ALA62 SER63 GLY64 ASP65 GLY66 LEU67 PHE68 LEU69 GLU70 GLU71 TYR72 TRP73 LYS74 GLN75 HIS76 LYS77 GLU78 ALA79 SER80 ALA81 VAL82 LEU83 VAL84 SER85 PRO86 TRP87 HIS88 ARG89 MET90 SER91 TYR92 PHE93 PHE94 ASN95 PRO96 VAL97 SER98 ASN99 PHE100 ILE101 SER102 PHE103 GLU104 LEU105 GLU106 LYS107 THR108 ILE109 LYS110 GLU111 LEU112 HIS113 GLU114 VAL115 VAL116 GLY117 ASN118 ALA119 ALA120 ALA121 LYS122 ASP123 ARG124 TYR125 ILE126 VAL127 PHE128 GLY129 VAL130 GLY131 VAL132 THR133 GLN134 LEU135 ILE136 HIS137 GLY138 LEU139 VAL140 ILE141 SER142 LEU143 SER144 PRO145 ASN146 MET147 THR148 ALA149 THR150 PRO151 ASP152 ALA153 PRO154 GLU155 SER156 LYS157 VAL158 VAL159 ALA160 HIS161 ALA162 PRO163 PHE164 TYR165 PRO166 VAL167 PHE168 ARG169 GLU170 GLN171 THR172 LYS173 TYR174 PHE175 ASP176 LYS177 LYS178 GLY179 TYR180 VAL181 TRP182 ALA183 GLY184 ASN185 ALA186 ALA187 ASN188 TYR189 VAL190 ASN191 VAL192 SER193 ASN194 PRO195 GLU196 GLN197 TYR198 ILE199 GLU200 MET201 VAL202 THR203 SER204 PRO205 ASN206 ASN207 PRO208 GLU209 GLY210 LEU211 LEU212 ARG213 HIS214 ALA215 VAL216 ILE217 LYS218 GLY219 CYS220 LYS221 SER222 ILE223 TYR224 ASP225 MET226 VAL227 TYR228 TYR229 TRP230 PRO231 HIS232 TYR233 THR234 PRO235 ILE236 LYS237 TYR238 LYS239 ALA240 ASP241 GLU242 ASP243 ILE244 LEU245 LEU246 PHE247 THR248 MET249 SER250 LYS251 PHE252 THR253 GLY254 HIS255 SER256 GLY257 SER258 ARG259 PHE260 GLY261 TRP262 ALA263 LEU264 ILE265 LYS266 ASP267 GLU268 SER269 VAL270 TYR271 ASN272 ASN273 LEU274 LEU275 ASN276 TYR277 MET278 THR279 LYS280 ASN281 THR282 GLU283 GLY284 THR285 PRO286 ARG287 GLU288 THR289 GLN290 LEU291 ARG292 SER293 LEU294 LYS295 VAL296 LEU297 LYS298 GLU299 VAL300 VAL301 ALA302 MET303 VAL304 LYS305 THR306 GLN307 LYS308 GLY309 THR310 MET311 ARG312 ASP313 LEU314 ASN315 THR316 PHE317 GLY318 PHE319 LYS320 LYS321 LEU322 ARG323 GLU324 ARG325 TRP326 VAL327 ASN328 ILE329 THR330 ALA331 LEU332 LEU333 ASP334 GLN335 SER336 ASP337 ARG338 PHE339 SER340 TYR341 GLN342 GLU343 LEU344 PRO345 GLN346 SER347 GLU348 TYR349 CYS350 ASN351 TYR352 PHE353 ARG354 ARG355 MET356 ARG357 PRO358 PRO359 SER360 PRO361 SER362 TYR363 ALA364 TRP365 VAL366 LYS367 CYS368 GLU369 TRP370 GLU371 GLU372 ASP373 LYS374 ASP375 CYS376 TYR377 GLN378 THR379 PHE380 GLN381 ASN382 GLY383 ARG384 ILE385 ASN386 THR387 GLN388 ASN389 GLY390 VAL391 GLY392 PHE393 GLU394 ALA395 SER396 SER397 ARG398 TYR399 VAL400 ARG401 LEU402 SER403 LEU404 ILE405 LYS406 THR407 GLN408 ASP409 ASP410 PHE411 ASP412 GLN413 LEU414 MET415 TYR416 TYR417 LEU418 LYS419 ASP420 MET421 VAL422 LYS423 ALA424 LYS425 ARG426 LYS427
Unit 3 LYS1 MET2 THR3 TRP4 THR5 MET6 LYS7 ALA8 ALA9 GLU10 GLU11 ALA12 GLU13 ALA14 VAL15 ALA16 ASN17 ILE18 ASN19 CYS20 SER21 GLU22 HIS23 GLY24 ARG25 ALA26 PHE27 LEU28 ASP29 GLY30 ILE31 ILE32 SER33 GLU34 GLY35 SER36 PRO37 LYS38 CYS39 GLU40 CYS41 ASN42 THR43 CYS44 TYR45 THR46 GLY47 PRO48 ASP49 CYS50 SER51 GLU52 LYS53 ILE54 GLN55 GLY56 CYS57 SER58 ALA59 ASP60 VAL61 ALA62 SER63 GLY64 ASP65 GLY66 LEU67 PHE68 LEU69 GLU70 GLU71 TYR72 TRP73 LYS74 GLN75 HIS76 LYS77 GLU78 ALA79 SER80 ALA81 VAL82 LEU83 VAL84 SER85 PRO86 TRP87 HIS88 ARG89 MET90 SER91 TYR92 PHE93 PHE94 ASN95 PRO96 VAL97 SER98 ASN99 PHE100 ILE101 SER102 PHE103 GLU104 LEU105 GLU106 LYS107 THR108 ILE109 LYS110 GLU111 LEU112 HIS113 GLU114 VAL115 VAL116 GLY117 ASN118 ALA119 ALA120 ALA121 LYS122 ASP123 ARG124 TYR125 ILE126 VAL127 PHE128 GLY129 VAL130 GLY131 VAL132 THR133 GLN134 LEU135 ILE136 HIS137 GLY138 LEU139 VAL140 ILE141 SER142 LEU143 SER144 PRO145 ASN146 MET147 THR148 ALA149 THR150 PRO151 ASP152 ALA153 PRO154 GLU155 SER156 LYS157 VAL158 VAL159 ALA160 HIS161 ALA162 PRO163 PHE164 TYR165 PRO166 VAL167 PHE168 ARG169 GLU170 GLN171 THR172 LYS173 TYR174 PHE175 ASP176 LYS177 LYS178 GLY179 TYR180 VAL181 TRP182 ALA183 GLY184 ASN185 ALA186 ALA187 ASN188 TYR189 VAL190 ASN191 VAL192 SER193 ASN194 PRO195 GLU196 GLN197 TYR198 ILE199 GLU200 MET201 VAL202 THR203 SER204 PRO205 ASN206 ASN207 PRO208 GLU209 GLY210 LEU211 LEU212 ARG213 HIS214 ALA215 VAL216 ILE217 LYS218 GLY219 CYS220 LYS221 SER222 ILE223 TYR224 ASP225 MET226 VAL227 TYR228 TYR229 TRP230 PRO231 HIS232 TYR233 THR234 PRO235 ILE236 LYS237 TYR238 LYS239 ALA240 ASP241 GLU242 ASP243 ILE244 LEU245 LEU246 PHE247 THR248 MET249 SER250 LYS251 PHE252 THR253 GLY254 HIS255 SER256 GLY257 SER258 ARG259 PHE260 GLY261 TRP262 ALA263 LEU264 ILE265 LYS266 ASP267 GLU268 SER269 VAL270 TYR271 ASN272 ASN273 LEU274 LEU275 ASN276 TYR277 MET278 THR279 LYS280 ASN281 THR282 GLU283 GLY284 THR285 PRO286 ARG287 GLU288 THR289 GLN290 LEU291 ARG292 SER293 LEU294 LYS295 VAL296 LEU297 LYS298 GLU299 VAL300 VAL301 ALA302 MET303 VAL304 LYS305 THR306 GLN307 LYS308 GLY309 THR310 MET311 ARG312 ASP313 LEU314 ASN315 THR316 PHE317 GLY318 PHE319 LYS320 LYS321 LEU322 ARG323 GLU324 ARG325 TRP326 VAL327 ASN328 ILE329 THR330 ALA331 LEU332 LEU333 ASP334 GLN335 SER336 ASP337 ARG338 PHE339 SER340 TYR341 GLN342 GLU343 LEU344 PRO345 GLN346 SER347 GLU348 TYR349 CYS350 ASN351 TYR352 PHE353 ARG354 ARG355 MET356 ARG357 PRO358 PRO359 SER360 PRO361 SER362 TYR363 ALA364 TRP365 VAL366 LYS367 CYS368 GLU369 TRP370 GLU371 GLU372 ASP373 LYS374 ASP375 CYS376 TYR377 GLN378 THR379 PHE380 GLN381 ASN382 GLY383 ARG384 ILE385 ASN386 THR387 GLN388 ASN389 GLY390 VAL391 GLY392 PHE393 GLU394 ALA395 SER396 SER397 ARG398 TYR399 VAL400 ARG401 LEU402 SER403 LEU404 ILE405 LYS406 THR407 GLN408 ASP409 ASP410 PHE411 ASP412 GLN413 LEU414 MET415 TYR416 TYR417 LEU418 LYS419 ASP420 MET421 VAL422 LYS423 ALA424 LYS425
Unit 4 LYS1 MET2 THR3 TRP4 THR5 MET6 LYS7 ALA8 ALA9 GLU10 GLU11 ALA12 GLU13 ALA14 VAL15 ALA16 ASN17 ILE18 ASN19 CYS20 SER21 GLU22 HIS23 GLY24 ARG25 ALA26 PHE27 LEU28 ASP29 GLY30 ILE31 ILE32 SER33 GLU34 GLY35 SER36 PRO37 LYS38 CYS39 GLU40 CYS41 ASN42 THR43 CYS44 TYR45 THR46 GLY47 PRO48 ASP49 CYS50 SER51 GLU52 LYS53 ILE54 GLN55 GLY56 CYS57 SER58 ALA59 ASP60 VAL61 ALA62 SER63 GLY64 ASP65 GLY66 LEU67 PHE68 LEU69 GLU70 GLU71 TYR72 TRP73 LYS74 GLN75 HIS76 LYS77 GLU78 ALA79 SER80 ALA81 VAL82 LEU83 VAL84 SER85 PRO86 TRP87 HIS88 ARG89 MET90 SER91 TYR92 PHE93 PHE94 ASN95 PRO96 VAL97 SER98 ASN99 PHE100 ILE101 SER102 PHE103 GLU104 LEU105 GLU106 LYS107 THR108 ILE109 LYS110 GLU111 LEU112 HIS113 GLU114 VAL115 VAL116 GLY117 ASN118 ALA119 ALA120 ALA121 LYS122 ASP123 ARG124 TYR125 ILE126 VAL127 PHE128 GLY129 VAL130 GLY131 VAL132 THR133 GLN134 LEU135 ILE136 HIS137 GLY138 LEU139 VAL140 ILE141 SER142 LEU143 SER144 PRO145 ASN146 MET147 THR148 ALA149 THR150 PRO151 ASP152 ALA153 PRO154 GLU155 SER156 LYS157 VAL158 VAL159 ALA160 HIS161 ALA162 PRO163 PHE164 TYR165 PRO166 VAL167 PHE168 ARG169 GLU170 GLN171 THR172 LYS173 TYR174 PHE175 ASP176 LYS177 LYS178 GLY179 TYR180 VAL181 TRP182 ALA183 GLY184 ASN185 ALA186 ALA187 ASN188 TYR189 VAL190 ASN191 VAL192 SER193 ASN194 PRO195 GLU196 GLN197 TYR198 ILE199 GLU200 MET201 VAL202 THR203 SER204 PRO205 ASN206 ASN207 PRO208 GLU209 GLY210 LEU211 LEU212 ARG213 HIS214 ALA215 VAL216 ILE217 LYS218 GLY219 CYS220 LYS221 SER222 ILE223 TYR224 ASP225 MET226 VAL227 TYR228 TYR229 TRP230 PRO231 HIS232 TYR233 THR234 PRO235 ILE236 LYS237 TYR238 LYS239 ALA240 ASP241 GLU242 ASP243 ILE244 LEU245 LEU246 PHE247 THR248 MET249 SER250 LYS251 PHE252 THR253 GLY254 HIS255 SER256 GLY257 SER258 ARG259 PHE260 GLY261 TRP262 ALA263 LEU264 ILE265 LYS266 ASP267 GLU268 SER269 VAL270 TYR271 ASN272 ASN273 LEU274 LEU275 ASN276 TYR277 MET278 THR279 LYS280 ASN281 THR282 GLU283 GLY284 THR285 PRO286 ARG287 GLU288 THR289 GLN290 LEU291 ARG292 SER293 LEU294 LYS295 VAL296 LEU297 LYS298 GLU299 VAL300 VAL301 ALA302 MET303 VAL304 LYS305 THR306 GLN307 LYS308 GLY309 THR310 MET311 ARG312 ASP313 LEU314 ASN315 THR316 PHE317 GLY318 PHE319 LYS320 LYS321 LEU322 ARG323 GLU324 ARG325 TRP326 VAL327 ASN328 ILE329 THR330 ALA331 LEU332 LEU333 ASP334 GLN335 SER336 ASP337 ARG338 PHE339 SER340 TYR341 GLN342 GLU343 LEU344 PRO345 GLN346 SER347 GLU348 TYR349 CYS350 ASN351 TYR352 PHE353 ARG354 ARG355 MET356 ARG357 PRO358 PRO359 SER360 PRO361 SER362 TYR363 ALA364 TRP365 VAL366 LYS367 CYS368 GLU369 TRP370 GLU371 GLU372 ASP373 LYS374 ASP375 CYS376 TYR377 GLN378 THR379 PHE380 GLN381 ASN382 GLY383 ARG384 ILE385 ASN386 THR387 GLN388 ASN389 GLY390 VAL391 GLY392 PHE393 GLU394 ALA395 SER396 SER397 ARG398 TYR399 VAL400 ARG401 LEU402 SER403 LEU404 ILE405 LYS406 THR407 GLN408 ASP409 ASP410 PHE411 ASP412 GLN413 LEU414 MET415 TYR416 TYR417 LEU418 LYS419 ASP420 MET421 VAL422 LYS423 ALA424 LYS425 ARG426 LYS427
Ligands
Unit 5 NAG1 NAG2 BMA3 XYP4 BMA5 FUC6
Unit 6 NAG1 FUC2
Unit 7 NAG1 NAG2 BMA3 FUC4
Unit 8 NAG1 FUC2 NAG3
Unit 9 NAG1 NAG2
Unit 10 NAG506 NAG507 NAG4500 CL5001 P1T6001
Unit 11 NAG502 NAG503 NAG3500 CL5002 P1T6002
Unit 12 NAG504 NAG505 CL5003 P1T6003
Unit 13 CL5004 P1T6004
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany