2HMO - Sequence, Chains, Asymmetric and Biological Units

• Title: CRYSTAL STRUCTURE OF NAPHTHALENE 1,2-DIOXYGENASE BOUND TO 3- NITROTOLUENE.
• Keywords: OXIDOREDUCTASE, PROTEIN, RIESKE OXYGENASE
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	2HMO	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	NAPHTHALENE 1,2-DIOXYGENASE ALPHA SUBUNIT	A	446	3473	0
2	Protein	NAPHTHALENE 1,2-DIOXYGENASE BETA SUBUNIT	B	192	1600	0
3	Ligand	NAPHTHALENE 1,2-DIOXYGENASE ALPHA SUBUNIT	A	16	0	69
4	Ligand	NAPHTHALENE 1,2-DIOXYGENASE BETA SUBUNIT	B	8	0	34
5	Water			716	0	716
total				1378	5073	819

Proteins

Unit 1

MET 1 ASN 2 TYR 3 ASN 4 ASN 5 LYS 6 ILE 7 LEU 8 VAL 9 SER 10 GLU 11 SER 12 GLY 13 LEU 14 SER 15 GLN 16 LYS 17 HIS 18 LEU 19 ILE 20 HIS 21 GLY 22 ASP 23 GLU 24 GLU 25 LEU 26 PHE 27 GLN 28 HIS 29 GLU 30 LEU 31 LYS 32 THR 33 ILE 34 PHE 35 ALA 36 ARG 37 ASN 38 TRP 39 LEU 40 PHE 41 LEU 42 THR 43 HIS 44 ASP 45 SER 46 LEU 47 ILE 48 PRO 49 ALA 50 PRO 51 GLY 52 ASP 53 TYR 54 VAL 55 THR 56 ALA 57 LYS 58 MET 59 GLY 60 ILE 61 ASP 62 GLU 63 VAL 64 ILE 65 VAL 66 SER 67 ARG 68 GLN 69 ASN 70 ASP 71 GLY 72 SER 73 ILE 74 ARG 75 ALA 76 PHE 77 LEU 78 ASN 79 VAL 80 CYS 81 ARG 82 HIS 83 ARG 84 GLY 85 LYS 86 THR 87 LEU 88 VAL 89 SER 90 VAL 91 GLU 92 ALA 93 GLY 94 ASN 95 ALA 96 LYS 97 GLY 98 PHE 99 VAL 100 CYS 101 SER 102 TYR 103 HIS 104 GLY 105 TRP 106 GLY 107 PHE 108 GLY 109 SER 110 ASN 111 GLY 112 GLU 113 LEU 114 GLN 115 SER 116 VAL 117 PRO 118 PHE 119 GLU 120 LYS 121 ASP 122 LEU 123 TYR 124 GLY 125 GLU 126 SER 127 LEU 128 ASN 129 LYS 130 LYS 131 CYS 132 LEU 133 GLY 134 LEU 135 LYS 136 GLU 137 VAL 138 ALA 139 ARG 140 VAL 141 GLU 142 SER 143 PHE 144 HIS 145 GLY 146 PHE 147 ILE 148 TYR 149 GLY 150 CYS 151 PHE 152 ASP 153 GLN 154 GLU 155 ALA 156 PRO 157 PRO 158 LEU 159 MET 160 ASP 161 TYR 162 LEU 163 GLY 164 ASP 165 ALA 166 ALA 167 TRP 168 TYR 169 LEU 170 GLU 171 PRO 172 MET 173 PHE 174 LYS 175 HIS 176 SER 177 GLY 178 GLY 179 LEU 180 GLU 181 LEU 182 VAL 183 GLY 184 PRO 185 PRO 186 GLY 187 LYS 188 VAL 189 VAL 190 ILE 191 LYS 192 ALA 193 ASN 194 TRP 195 LYS 196 ALA 197 PRO 198 ALA 199 GLU 200 ASN 201 PHE 202 VAL 203 GLY 204 ASP 205 ALA 206 TYR 207 HIS 208 VAL 209 GLY 210 TRP 211 THR 212 HIS 213 ALA 214 SER 215 SER 216 LEU 217 ARG 218 SER 219 GLY 220 GLU 221 SER 222 ILE 223 PHE 224 SER 225 SER 226 LEU 227 ALA 228 GLY 229 ASN 230 ALA 231 ALA 232 LEU 233 PRO 234 PRO 235 GLU 236 GLY 237 ALA 238 GLY 239 LEU 240 GLN 241 MET 242 THR 243 SER 244 LYS 245 TYR 246 GLY 247 SER 248 GLY 249 MET 250 GLY 251 VAL 252 LEU 253 TRP 254 ASP 255 GLY 256 TYR 257 SER 258 GLY 259 VAL 260 HIS 261 SER 262 ALA 263 ASP 264 LEU 265 VAL 266 PRO 267 GLU 268 LEU 269 MET 270 ALA 271 PHE 272 GLY 273 GLY 274 ALA 275 LYS 276 GLN 277 GLU 278 ARG 279 LEU 280 ASN 281 LYS 282 GLU 283 ILE 284 GLY 285 ASP 286 VAL 287 ARG 288 ALA 289 ARG 290 ILE 291 TYR 292 ARG 293 SER 294 HIS 295 LEU 296 ASN 297 CYS 298 THR 299 VAL 300 PHE 301 PRO 302 ASN 303 ASN 304 SER 305 MET 306 LEU 307 THR 308 CYS 309 SER 310 GLY 311 VAL 312 PHE 313 LYS 314 VAL 315 TRP 316 ASN 317 PRO 318 ILE 319 ASP 320 ALA 321 ASN 322 THR 323 THR 324 GLU 325 VAL 326 TRP 327 THR 328 TYR 329 ALA 330 ILE 331 VAL 332 GLU 333 LYS 334 ASP 335 MET 336 PRO 337 GLU 338 ASP 339 LEU 340 LYS 341 ARG 342 ARG 343 LEU 344 ALA 345 ASP 346 SER 347 VAL 348 GLN 349 ARG 350 THR 351 PHE 352 GLY 353 PRO 354 ALA 355 GLY 356 PHE 357 TRP 358 GLU 359 SER 360 ASP 361 ASP 362 ASN 363 ASP 364 ASN 365 MET 366 GLU 367 THR 368 ALA 369 SER 370 GLN 371 ASN 372 GLY 373 LYS 374 LYS 375 TYR 376 GLN 377 SER 378 ARG 379 ASP 380 SER 381 ASP 382 LEU 383 LEU 384 SER 385 ASN 386 LEU 387 GLY 388 PHE 389 GLY 390 GLU 391 ASP 392 VAL 393 TYR 394 GLY 395 ASP 396 ALA 397 VAL 398 TYR 399 PRO 400 GLY 401 VAL 402 VAL 403 GLY 404 LYS 405 SER 406 ALA 407 ILE 408 GLY 409 GLU 410 THR 411 SER 412 TYR 413 ARG 414 GLY 415 PHE 416 TYR 417 ARG 418 ALA 419 TYR 420 GLN 421 ALA 422 HIS 423 VAL 424 SER 425 SER 426 SER 427 ASN 428 TRP 429 ALA 430 GLU 431 PHE 432 GLU 433 HIS 434 ALA 435 SER 436 SER 437 THR 438 TRP 439 HIS 440 THR 441 GLU 442 LEU 443 THR 444 LYS 445 THR 446

Unit 2

ILE 3 ASN 4 ILE 5 GLN 6 GLU 7 ASP 8 LYS 9 LEU 10 VAL 11 SER 12 ALA 13 HIS 14 ASP 15 ALA 16 GLU 17 GLU 18 ILE 19 LEU 20 ARG 21 PHE 22 PHE 23 ASN 24 CYS 25 HIS 26 ASP 27 SER 28 ALA 29 LEU 30 GLN 31 GLN 32 GLU 33 ALA 34 THR 35 THR 36 LEU 37 LEU 38 THR 39 GLN 40 GLU 41 ALA 42 HIS 43 LEU 44 LEU 45 ASP 46 ILE 47 GLN 48 ALA 49 TYR 50 ARG 51 ALA 52 TRP 53 LEU 54 GLU 55 HIS 56 CYS 57 VAL 58 GLY 59 SER 60 GLU 61 VAL 62 GLN 63 TYR 64 GLN 65 VAL 66 ILE 67 SER 68 ARG 69 GLU 70 LEU 71 ARG 72 ALA 73 ALA 74 SER 75 GLU 76 ARG 77 ARG 78 TYR 79 LYS 80 LEU 81 ASN 82 GLU 83 ALA 84 MET 85 ASN 86 VAL 87 TYR 88 ASN 89 GLU 90 ASN 91 PHE 92 GLN 93 GLN 94 LEU 95 LYS 96 VAL 97 ARG 98 VAL 99 GLU 100 HIS 101 GLN 102 LEU 103 ASP 104 PRO 105 GLN 106 ASN 107 TRP 108 GLY 109 ASN 110 SER 111 PRO 112 LYS 113 LEU 114 ARG 115 PHE 116 THR 117 ARG 118 PHE 119 ILE 120 THR 121 ASN 122 VAL 123 GLN 124 ALA 125 ALA 126 MET 127 ASP 128 VAL 129 ASN 130 ASP 131 LYS 132 GLU 133 LEU 134 LEU 135 HIS 136 ILE 137 ARG 138 SER 139 ASN 140 VAL 141 ILE 142 LEU 143 HIS 144 ARG 145 ALA 146 ARG 147 ARG 148 GLY 149 ASN 150 GLN 151 VAL 152 ASP 153 VAL 154 PHE 155 TYR 156 ALA 157 ALA 158 ARG 159 GLU 160 ASP 161 LYS 162 TRP 163 LYS 164 ARG 165 GLY 166 GLU 167 GLY 168 GLY 169 VAL 170 ARG 171 LYS 172 LEU 173 VAL 174 GLN 175 ARG 176 PHE 177 VAL 178 ASP 179 TYR 180 PRO 181 GLU 182 ARG 183 ILE 184 LEU 185 GLN 186 THR 187 HIS 188 ASN 189 LEU 190 MET 191 VAL 192 PHE 193 LEU 194

Ligands

Unit 3	FE 450 3NT 801 EDO 803 EDO 804 SO4 805 EDO 809 EDO 812 SO4 814 FES 815 EDO 816 EDO 817 EDO 818 EDO 819 EDO 821 EDO 822 EDO 823
Unit 4	EDO 806 EDO 807 EDO 808 SO4 810 SO4 811 EDO 813 EDO 817 EDO 820