|
[Image Library Home] | [Helix Analysis Home] |
| [Image Library Entry] | [Analyse Helix] |
| Title | MODEL STRUCTURE OF DNA DODECAMER D(GCCTATTAGCG) BOUND TO HAIRPIN POLYAMIDE IM-PY-PY-GAMMA-PY-PY-PY-BETA-DP | |
| Keywords | MODEL BUILT, MINOR GROOVE BINDING, DNA-DRUG, HAIRPIN POLYAMIDE, IMIDAZOLE PYRROLE POLYAMIDE | |
| Experiment | theoretical model | |
| Number of Models | 1 |
| Database | ID code | Status | Coordinate files | ||
| Header | Asymmetric unit | Biological unit | |||
| PDB | 2GYN | released | available | available | Quaternary Structure Server |
| Unit | Type | Name | Chain ID | Residues | Atoms | Hetatoms |
|---|---|---|---|---|---|---|
| 1 | DNA | A | 11 | 348 | 0 | |
| 2 | DNA | B | 11 | 348 | 0 | |
| 3 | Ligand | 1 | 0 | 122 | ||
| total | 23 | 696 | 122 |
| Unit 1 | G1 C2 C3 T4 A5 T6 T7 A8 G9 C10 G11 |
| Unit 2 | C12 G13 C14 T15 A16 A17 T18 A19 G20 G21 C22 |
| Unit 3 | IPQ23 |
Check the naming of phosphate and ribose substituents. Recommended for phosphate oxygens and for ribose hydrogens in NMR structures.
| Perl script: | PDBscan.pl (15 Sep 2016) |
| Author: | Peter Slickers (slickers@leibniz-fli.de), IMB Jena, Germany |