2GSM - Sequence, Chains, Asymmetric and Biological Units

• Title: CATALYTIC CORE (SUBUNITS I AND II) OF CYTOCHROME C OXIDASE F RHODOBACTER SPHAEROIDES
• Keywords: TRANSMEMBRANE PROTEIN COMPLEX, OXIDOREDUCTASE
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	2GSM	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	CYTOCHROME C OXIDASE SUBUNIT 1	A	535	4212	0
2	Protein	CYTOCHROME C OXIDASE SUBUNIT 2	B	256	2025	0
3	Protein	CYTOCHROME C OXIDASE SUBUNIT 1	C	534	4201	0
4	Protein	CYTOCHROME C OXIDASE SUBUNIT 2	D	256	2025	0
5	Ligand	CYTOCHROME C OXIDASE SUBUNIT 1	A	14	0	282
6	Ligand	CYTOCHROME C OXIDASE SUBUNIT 2	B	7	0	69
7	Ligand	CYTOCHROME C OXIDASE SUBUNIT 1	C	13	0	257
8	Ligand	CYTOCHROME C OXIDASE SUBUNIT 2	D	8	0	70
9	Water			503	0	503
total				2126	12463	1181

Proteins

Unit 1	PHE 17 THR 18 ARG 19 TRP 20 PHE 21 MET 22 SER 23 THR 24 ASN 25 HIS 26 LYS 27 ASP 28 ILE 29 GLY 30 VAL 31 LEU 32 TYR 33 LEU 34 PHE 35 THR 36 GLY 37 GLY 38 LEU 39 VAL 40 GLY 41 LEU 42 ILE 43 SER 44 VAL 45 ALA 46 PHE 47 THR 48 VAL 49 TYR 50 MET 51 ARG 52 MET 53 GLU 54 LEU 55 MET 56 ALA 57 PRO 58 GLY 59 VAL 60 GLN 61 PHE 62 MET 63 CYS 64 ALA 65 GLU 66 HIS 67 LEU 68 GLU 69 SER 70 GLY 71 LEU 72 VAL 73 LYS 74 GLY 75 PHE 76 PHE 77 GLN 78 SER 79 LEU 80 TRP 81 PRO 82 SER 83 ALA 84 VAL 85 GLU 86 ASN 87 CYS 88 THR 89 PRO 90 ASN 91 GLY 92 HIS 93 LEU 94 TRP 95 ASN 96 VAL 97 MET 98 ILE 99 THR 100 GLY 101 HIS 102 GLY 103 ILE 104 LEU 105 MET 106 MET 107 PHE 108 PHE 109 VAL 110 VAL 111 ILE 112 PRO 113 ALA 114 LEU 115 PHE 116 GLY 117 GLY 118 PHE 119 GLY 120 ASN 121 TYR 122 PHE 123 MET 124 PRO 125 LEU 126 HIS 127 ILE 128 GLY 129 ALA 130 PRO 131 ASP 132 MET 133 ALA 134 PHE 135 PRO 136 ARG 137 MET 138 ASN 139 ASN 140 LEU 141 SER 142 TYR 143 TRP 144 LEU 145 TYR 146 VAL 147 ALA 148 GLY 149 THR 150 SER 151 LEU 152 ALA 153 VAL 154 ALA 155 SER 156 LEU 157 PHE 158 ALA 159 PRO 160 GLY 161 GLY 162 ASN 163 GLY 164 GLN 165 LEU 166 GLY 167 SER 168 GLY 169 ILE 170 GLY 171 TRP 172 VAL 173 LEU 174 TYR 175 PRO 176 PRO 177 LEU 178 SER 179 THR 180 SER 181 GLU 182 SER 183 GLY 184 TYR 185 SER 186 THR 187 ASP 188 LEU 189 ALA 190 ILE 191 PHE 192 ALA 193 VAL 194 HIS 195 LEU 196 SER 197 GLY 198 ALA 199 SER 200 SER 201 ILE 202 LEU 203 GLY 204 ALA 205 ILE 206 ASN 207 MET 208 ILE 209 THR 210 THR 211 PHE 212 LEU 213 ASN 214 MET 215 ARG 216 ALA 217 PRO 218 GLY 219 MET 220 THR 221 MET 222 HIS 223 LYS 224 VAL 225 PRO 226 LEU 227 PHE 228 ALA 229 TRP 230 SER 231 ILE 232 PHE 233 VAL 234 THR 235 ALA 236 TRP 237 LEU 238 ILE 239 LEU 240 LEU 241 ALA 242 LEU 243 PRO 244 VAL 245 LEU 246 ALA 247 GLY 248 ALA 249 ILE 250 THR 251 MET 252 LEU 253 LEU 254 THR 255 ASP 256 ARG 257 ASN 258 PHE 259 GLY 260 THR 261 THR 262 PHE 263 PHE 264 GLN 265 PRO 266 SER 267 GLY 268 GLY 269 GLY 270 ASP 271 PRO 272 VAL 273 LEU 274 TYR 275 GLN 276 HIS 277 ILE 278 LEU 279 TRP 280 PHE 281 PHE 282 GLY 283 HIS 284 PRO 285 GLU 286 VAL 287 TYR 288 ILE 289 ILE 290 VAL 291 LEU 292 PRO 293 ALA 294 PHE 295 GLY 296 ILE 297 VAL 298 SER 299 HIS 300 VAL 301 ILE 302 ALA 303 THR 304 PHE 305 ALA 306 LYS 307 LYS 308 PRO 309 ILE 310 PHE 311 GLY 312 TYR 313 LEU 314 PRO 315 MET 316 VAL 317 TYR 318 ALA 319 MET 320 VAL 321 ALA 322 ILE 323 GLY 324 VAL 325 LEU 326 GLY 327 PHE 328 VAL 329 VAL 330 TRP 331 ALA 332 HIS 333 HIS 334 MET 335 TYR 336 THR 337 ALA 338 GLY 339 LEU 340 SER 341 LEU 342 THR 343 GLN 344 GLN 345 SER 346 TYR 347 PHE 348 MET 349 MET 350 ALA 351 THR 352 MET 353 VAL 354 ILE 355 ALA 356 VAL 357 PRO 358 THR 359 GLY 360 ILE 361 LYS 362 ILE 363 PHE 364 SER 365 TRP 366 ILE 367 ALA 368 THR 369 MET 370 TRP 371 GLY 372 GLY 373 SER 374 ILE 375 GLU 376 LEU 377 LYS 378 THR 379 PRO 380 MET 381 LEU 382 TRP 383 ALA 384 LEU 385 GLY 386 PHE 387 LEU 388 PHE 389 LEU 390 PHE 391 THR 392 VAL 393 GLY 394 GLY 395 VAL 396 THR 397 GLY 398 ILE 399 VAL 400 LEU 401 SER 402 GLN 403 ALA 404 SER 405 VAL 406 ASP 407 ARG 408 TYR 409 TYR 410 HIS 411 ASP 412 THR 413 TYR 414 TYR 415 VAL 416 VAL 417 ALA 418 HIS 419 PHE 420 HIS 421 TYR 422 VAL 423 MET 424 SER 425 LEU 426 GLY 427 ALA 428 VAL 429 PHE 430 GLY 431 ILE 432 PHE 433 ALA 434 GLY 435 ILE 436 TYR 437 PHE 438 TRP 439 ILE 440 GLY 441 LYS 442 MET 443 SER 444 GLY 445 ARG 446 GLN 447 TYR 448 PRO 449 GLU 450 TRP 451 ALA 452 GLY 453 LYS 454 LEU 455 HIS 456 PHE 457 TRP 458 MET 459 MET 460 PHE 461 VAL 462 GLY 463 ALA 464 ASN 465 LEU 466 THR 467 PHE 468 PHE 469 PRO 470 GLN 471 HIS 472 PHE 473 LEU 474 GLY 475 ARG 476 GLN 477 GLY 478 MET 479 PRO 480 ARG 481 ARG 482 TYR 483 ILE 484 ASP 485 TYR 486 PRO 487 GLU 488 ALA 489 PHE 490 ALA 491 THR 492 TRP 493 ASN 494 PHE 495 VAL 496 SER 497 SER 498 LEU 499 GLY 500 ALA 501 PHE 502 LEU 503 SER 504 PHE 505 ALA 506 SER 507 PHE 508 LEU 509 PHE 510 PHE 511 LEU 512 GLY 513 VAL 514 ILE 515 PHE 516 TYR 517 THR 518 LEU 519 THR 520 ARG 521 GLY 522 ALA 523 ARG 524 VAL 525 THR 526 ALA 527 ASN 528 ASN 529 TYR 530 TRP 531 ASN 532 GLU 533 HIS 534 ALA 535 ASP 536 THR 537 LEU 538 GLU 539 TRP 540 THR 541 LEU 542 THR 543 SER 544 PRO 545 PRO 546 PRO 547 GLU 548 HIS 549 THR 550 PHE 551
Unit 2	LEU 30 GLU 31 ILE 32 ILE 33 GLY 34 ARG 35 PRO 36 GLN 37 PRO 38 GLY 39 GLY 40 THR 41 GLY 42 PHE 43 GLN 44 PRO 45 SER 46 ALA 47 SER 48 PRO 49 VAL 50 ALA 51 THR 52 GLN 53 ILE 54 HIS 55 TRP 56 LEU 57 ASP 58 GLY 59 PHE 60 ILE 61 LEU 62 VAL 63 ILE 64 ILE 65 ALA 66 ALA 67 ILE 68 THR 69 ILE 70 PHE 71 VAL 72 THR 73 LEU 74 LEU 75 ILE 76 LEU 77 TYR 78 ALA 79 VAL 80 TRP 81 ARG 82 PHE 83 HIS 84 GLU 85 LYS 86 ARG 87 ASN 88 LYS 89 VAL 90 PRO 91 ALA 92 ARG 93 PHE 94 THR 95 HIS 96 ASN 97 SER 98 PRO 99 LEU 100 GLU 101 ILE 102 ALA 103 TRP 104 THR 105 ILE 106 VAL 107 PRO 108 ILE 109 VAL 110 ILE 111 LEU 112 VAL 113 ALA 114 ILE 115 GLY 116 ALA 117 PHE 118 SER 119 LEU 120 PRO 121 VAL 122 LEU 123 PHE 124 ASN 125 GLN 126 GLN 127 GLU 128 ILE 129 PRO 130 GLU 131 ALA 132 ASP 133 VAL 134 THR 135 VAL 136 LYS 137 VAL 138 THR 139 GLY 140 TYR 141 GLN 142 TRP 143 TYR 144 TRP 145 GLY 146 TYR 147 GLU 148 TYR 149 PRO 150 ASP 151 GLU 152 GLU 153 ILE 154 SER 155 PHE 156 GLU 157 SER 158 TYR 159 MET 160 ILE 161 GLY 162 SER 163 PRO 164 ALA 165 THR 166 GLY 167 GLY 168 ASP 169 ASN 170 ARG 171 MET 172 SER 173 PRO 174 GLU 175 VAL 176 GLU 177 GLN 178 GLN 179 LEU 180 ILE 181 GLU 182 ALA 183 GLY 184 TYR 185 SER 186 ARG 187 ASP 188 GLU 189 PHE 190 LEU 191 LEU 192 ALA 193 THR 194 ASP 195 THR 196 ALA 197 MET 198 VAL 199 VAL 200 PRO 201 VAL 202 ASN 203 LYS 204 THR 205 VAL 206 VAL 207 VAL 208 GLN 209 VAL 210 THR 211 GLY 212 ALA 213 ASP 214 VAL 215 ILE 216 HIS 217 SER 218 TRP 219 THR 220 VAL 221 PRO 222 ALA 223 PHE 224 GLY 225 VAL 226 LYS 227 GLN 228 ASP 229 ALA 230 VAL 231 PRO 232 GLY 233 ARG 234 LEU 235 ALA 236 GLN 237 LEU 238 TRP 239 PHE 240 ARG 241 ALA 242 GLU 243 ARG 244 GLU 245 GLY 246 ILE 247 PHE 248 PHE 249 GLY 250 GLN 251 CYS 252 SER 253 GLU 254 LEU 255 CYS 256 GLY 257 ILE 258 SER 259 HIS 260 ALA 261 TYR 262 MET 263 PRO 264 ILE 265 THR 266 VAL 267 LYS 268 VAL 269 VAL 270 SER 271 GLU 272 GLU 273 ALA 274 TYR 275 ALA 276 ALA 277 TRP 278 LEU 279 GLU 280 GLN 281 HIS 282 HIS 283 HIS 284 HIS 285
Unit 3	PHE 17 THR 18 ARG 19 TRP 20 PHE 21 MET 22 SER 23 THR 24 ASN 25 HIS 26 LYS 27 ASP 28 ILE 29 GLY 30 VAL 31 LEU 32 TYR 33 LEU 34 PHE 35 THR 36 GLY 37 GLY 38 LEU 39 VAL 40 GLY 41 LEU 42 ILE 43 SER 44 VAL 45 ALA 46 PHE 47 THR 48 VAL 49 TYR 50 MET 51 ARG 52 MET 53 GLU 54 LEU 55 MET 56 ALA 57 PRO 58 GLY 59 VAL 60 GLN 61 PHE 62 MET 63 CYS 64 ALA 65 GLU 66 HIS 67 LEU 68 GLU 69 SER 70 GLY 71 LEU 72 VAL 73 LYS 74 GLY 75 PHE 76 PHE 77 GLN 78 SER 79 LEU 80 TRP 81 PRO 82 SER 83 ALA 84 VAL 85 GLU 86 ASN 87 CYS 88 THR 89 PRO 90 ASN 91 GLY 92 HIS 93 LEU 94 TRP 95 ASN 96 VAL 97 MET 98 ILE 99 THR 100 GLY 101 HIS 102 GLY 103 ILE 104 LEU 105 MET 106 MET 107 PHE 108 PHE 109 VAL 110 VAL 111 ILE 112 PRO 113 ALA 114 LEU 115 PHE 116 GLY 117 GLY 118 PHE 119 GLY 120 ASN 121 TYR 122 PHE 123 MET 124 PRO 125 LEU 126 HIS 127 ILE 128 GLY 129 ALA 130 PRO 131 ASP 132 MET 133 ALA 134 PHE 135 PRO 136 ARG 137 MET 138 ASN 139 ASN 140 LEU 141 SER 142 TYR 143 TRP 144 LEU 145 TYR 146 VAL 147 ALA 148 GLY 149 THR 150 SER 151 LEU 152 ALA 153 VAL 154 ALA 155 SER 156 LEU 157 PHE 158 ALA 159 PRO 160 GLY 161 GLY 162 ASN 163 GLY 164 GLN 165 LEU 166 GLY 167 SER 168 GLY 169 ILE 170 GLY 171 TRP 172 VAL 173 LEU 174 TYR 175 PRO 176 PRO 177 LEU 178 SER 179 THR 180 SER 181 GLU 182 SER 183 GLY 184 TYR 185 SER 186 THR 187 ASP 188 LEU 189 ALA 190 ILE 191 PHE 192 ALA 193 VAL 194 HIS 195 LEU 196 SER 197 GLY 198 ALA 199 SER 200 SER 201 ILE 202 LEU 203 GLY 204 ALA 205 ILE 206 ASN 207 MET 208 ILE 209 THR 210 THR 211 PHE 212 LEU 213 ASN 214 MET 215 ARG 216 ALA 217 PRO 218 GLY 219 MET 220 THR 221 MET 222 HIS 223 LYS 224 VAL 225 PRO 226 LEU 227 PHE 228 ALA 229 TRP 230 SER 231 ILE 232 PHE 233 VAL 234 THR 235 ALA 236 TRP 237 LEU 238 ILE 239 LEU 240 LEU 241 ALA 242 LEU 243 PRO 244 VAL 245 LEU 246 ALA 247 GLY 248 ALA 249 ILE 250 THR 251 MET 252 LEU 253 LEU 254 THR 255 ASP 256 ARG 257 ASN 258 PHE 259 GLY 260 THR 261 THR 262 PHE 263 PHE 264 GLN 265 PRO 266 SER 267 GLY 268 GLY 269 GLY 270 ASP 271 PRO 272 VAL 273 LEU 274 TYR 275 GLN 276 HIS 277 ILE 278 LEU 279 TRP 280 PHE 281 PHE 282 GLY 283 HIS 284 PRO 285 GLU 286 VAL 287 TYR 288 ILE 289 ILE 290 VAL 291 LEU 292 PRO 293 ALA 294 PHE 295 GLY 296 ILE 297 VAL 298 SER 299 HIS 300 VAL 301 ILE 302 ALA 303 THR 304 PHE 305 ALA 306 LYS 307 LYS 308 PRO 309 ILE 310 PHE 311 GLY 312 TYR 313 LEU 314 PRO 315 MET 316 VAL 317 TYR 318 ALA 319 MET 320 VAL 321 ALA 322 ILE 323 GLY 324 VAL 325 LEU 326 GLY 327 PHE 328 VAL 329 VAL 330 TRP 331 ALA 332 HIS 333 HIS 334 MET 335 TYR 336 THR 337 ALA 338 GLY 339 LEU 340 SER 341 LEU 342 THR 343 GLN 344 GLN 345 SER 346 TYR 347 PHE 348 MET 349 MET 350 ALA 351 THR 352 MET 353 VAL 354 ILE 355 ALA 356 VAL 357 PRO 358 THR 359 GLY 360 ILE 361 LYS 362 ILE 363 PHE 364 SER 365 TRP 366 ILE 367 ALA 368 THR 369 MET 370 TRP 371 GLY 372 GLY 373 SER 374 ILE 375 GLU 376 LEU 377 LYS 378 THR 379 PRO 380 MET 381 LEU 382 TRP 383 ALA 384 LEU 385 GLY 386 PHE 387 LEU 388 PHE 389 LEU 390 PHE 391 THR 392 VAL 393 GLY 394 GLY 395 VAL 396 THR 397 GLY 398 ILE 399 VAL 400 LEU 401 SER 402 GLN 403 ALA 404 SER 405 VAL 406 ASP 407 ARG 408 TYR 409 TYR 410 HIS 411 ASP 412 THR 413 TYR 414 TYR 415 VAL 416 VAL 417 ALA 418 HIS 419 PHE 420 HIS 421 TYR 422 VAL 423 MET 424 SER 425 LEU 426 GLY 427 ALA 428 VAL 429 PHE 430 GLY 431 ILE 432 PHE 433 ALA 434 GLY 435 ILE 436 TYR 437 PHE 438 TRP 439 ILE 440 GLY 441 LYS 442 MET 443 SER 444 GLY 445 ARG 446 GLN 447 TYR 448 PRO 449 GLU 450 TRP 451 ALA 452 GLY 453 LYS 454 LEU 455 HIS 456 PHE 457 TRP 458 MET 459 MET 460 PHE 461 VAL 462 GLY 463 ALA 464 ASN 465 LEU 466 THR 467 PHE 468 PHE 469 PRO 470 GLN 471 HIS 472 PHE 473 LEU 474 GLY 475 ARG 476 GLN 477 GLY 478 MET 479 PRO 480 ARG 481 ARG 482 TYR 483 ILE 484 ASP 485 TYR 486 PRO 487 GLU 488 ALA 489 PHE 490 ALA 491 THR 492 TRP 493 ASN 494 PHE 495 VAL 496 SER 497 SER 498 LEU 499 GLY 500 ALA 501 PHE 502 LEU 503 SER 504 PHE 505 ALA 506 SER 507 PHE 508 LEU 509 PHE 510 PHE 511 LEU 512 GLY 513 VAL 514 ILE 515 PHE 516 TYR 517 THR 518 LEU 519 THR 520 ARG 521 GLY 522 ALA 523 ARG 524 VAL 525 THR 526 ALA 527 ASN 528 ASN 529 TYR 530 TRP 531 ASN 532 GLU 533 HIS 534 ALA 535 ASP 536 THR 537 LEU 538 GLU 539 TRP 540 THR 541 LEU 542 THR 543 SER 544 PRO 545 PRO 546 PRO 547 GLU 548 HIS 549 THR 550
Unit 4	LEU 30 GLU 31 ILE 32 ILE 33 GLY 34 ARG 35 PRO 36 GLN 37 PRO 38 GLY 39 GLY 40 THR 41 GLY 42 PHE 43 GLN 44 PRO 45 SER 46 ALA 47 SER 48 PRO 49 VAL 50 ALA 51 THR 52 GLN 53 ILE 54 HIS 55 TRP 56 LEU 57 ASP 58 GLY 59 PHE 60 ILE 61 LEU 62 VAL 63 ILE 64 ILE 65 ALA 66 ALA 67 ILE 68 THR 69 ILE 70 PHE 71 VAL 72 THR 73 LEU 74 LEU 75 ILE 76 LEU 77 TYR 78 ALA 79 VAL 80 TRP 81 ARG 82 PHE 83 HIS 84 GLU 85 LYS 86 ARG 87 ASN 88 LYS 89 VAL 90 PRO 91 ALA 92 ARG 93 PHE 94 THR 95 HIS 96 ASN 97 SER 98 PRO 99 LEU 100 GLU 101 ILE 102 ALA 103 TRP 104 THR 105 ILE 106 VAL 107 PRO 108 ILE 109 VAL 110 ILE 111 LEU 112 VAL 113 ALA 114 ILE 115 GLY 116 ALA 117 PHE 118 SER 119 LEU 120 PRO 121 VAL 122 LEU 123 PHE 124 ASN 125 GLN 126 GLN 127 GLU 128 ILE 129 PRO 130 GLU 131 ALA 132 ASP 133 VAL 134 THR 135 VAL 136 LYS 137 VAL 138 THR 139 GLY 140 TYR 141 GLN 142 TRP 143 TYR 144 TRP 145 GLY 146 TYR 147 GLU 148 TYR 149 PRO 150 ASP 151 GLU 152 GLU 153 ILE 154 SER 155 PHE 156 GLU 157 SER 158 TYR 159 MET 160 ILE 161 GLY 162 SER 163 PRO 164 ALA 165 THR 166 GLY 167 GLY 168 ASP 169 ASN 170 ARG 171 MET 172 SER 173 PRO 174 GLU 175 VAL 176 GLU 177 GLN 178 GLN 179 LEU 180 ILE 181 GLU 182 ALA 183 GLY 184 TYR 185 SER 186 ARG 187 ASP 188 GLU 189 PHE 190 LEU 191 LEU 192 ALA 193 THR 194 ASP 195 THR 196 ALA 197 MET 198 VAL 199 VAL 200 PRO 201 VAL 202 ASN 203 LYS 204 THR 205 VAL 206 VAL 207 VAL 208 GLN 209 VAL 210 THR 211 GLY 212 ALA 213 ASP 214 VAL 215 ILE 216 HIS 217 SER 218 TRP 219 THR 220 VAL 221 PRO 222 ALA 223 PHE 224 GLY 225 VAL 226 LYS 227 GLN 228 ASP 229 ALA 230 VAL 231 PRO 232 GLY 233 ARG 234 LEU 235 ALA 236 GLN 237 LEU 238 TRP 239 PHE 240 ARG 241 ALA 242 GLU 243 ARG 244 GLU 245 GLY 246 ILE 247 PHE 248 PHE 249 GLY 250 GLN 251 CYS 252 SER 253 GLU 254 LEU 255 CYS 256 GLY 257 ILE 258 SER 259 HIS 260 ALA 261 TYR 262 MET 263 PRO 264 ILE 265 THR 266 VAL 267 LYS 268 VAL 269 VAL 270 SER 271 GLU 272 GLU 273 ALA 274 TYR 275 ALA 276 ALA 277 TRP 278 LEU 279 GLU 280 GLN 281 HIS 282 HIS 283 HIS 284 HIS 285

Ligands

Unit 5	HEA 2001 HEA 2002 CU 3005 MG 3006 CA 3007 DMU 5001 DMU 5002 DMU 5004 TRD 5005 TRD 5006 TRD 5007 TRD 5009 TRD 5010 OH 6501
Unit 6	CU 3003 CU 3004 CD 3008 CD 3009 DMU 5003 TRD 5008 DMU 5011
Unit 7	HEA 3001 HEA 3002 CU 4005 MG 4006 CA 4007 TRD 6001 DMU 6002 DMU 6004 DMU 6005 TRD 6006 TRD 6009 TRD 6010 OH 7501
Unit 8	CU 4003 CU 4004 CD 4008 CD 4009 DMU 6003 TRD 6007 TRD 6008 DMU 6011