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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF 2-DEOXY-SCYLLO-INOSOSE SYNTHASE COMPLEXED WITH CARBAGLUCOSE-6-PHOSPHATE, NAD+ AND CO2+
Keywords AMINOGLYCOSIDE, 2-DEOXYSTREPTAMINE, DEHYDROQUINATE SYNTHASE, LYASE
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   2GRU     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   2-DEOXY-SCYLLO-INOSOSE SYNTHASE  A 367 2858 0
2  Protein   2-DEOXY-SCYLLO-INOSOSE SYNTHASE  B 360 2797 0
3  Ligand   2-DEOXY-SCYLLO-INOSOSE SYNTHASE  A 6 0 73
4  Ligand   2-DEOXY-SCYLLO-INOSOSE SYNTHASE  B 5 0 73
5 Water     320 0 320
total       1058 5655 466
Proteins
Unit 1 THR2 THR3 LYS4 GLN5 ILE6 CYS7 PHE8 ALA9 ASP10 ARG11 CYS12 PHE13 ASN14 PHE15 ALA16 PHE17 GLY18 GLU19 HIS20 VAL21 LEU22 GLU23 SER24 VAL25 GLU26 SER27 TYR28 ILE29 PRO30 ARG31 ASP32 GLU33 PHE34 ASP35 GLN36 TYR37 ILE38 MET39 ILE40 SER41 ASP42 SER43 GLY44 VAL45 PRO46 ASP47 SER48 ILE49 VAL50 HIS51 TYR52 ALA53 ALA54 GLU55 TYR56 PHE57 GLY58 LYS59 LEU60 ALA61 PRO62 VAL63 HIS64 ILE65 LEU66 ARG67 PHE68 GLN69 GLY70 GLY71 GLU72 GLU73 TYR74 LYS75 THR76 LEU77 SER78 THR79 VAL80 THR81 ASN82 LEU83 GLN84 GLU85 ARG86 ALA87 ILE88 ALA89 LEU90 GLY91 ALA92 ASN93 ARG94 ARG95 THR96 ALA97 ILE98 VAL99 ALA100 VAL101 GLY102 GLY103 GLY104 LEU105 THR106 GLY107 ASN108 VAL109 ALA110 GLY111 VAL112 ALA113 ALA114 GLY115 MET116 MET117 PHE118 ARG119 GLY120 ILE121 ALA122 LEU123 ILE124 HIS125 VAL126 PRO127 THR128 THR129 PHE130 LEU131 ALA132 ALA133 SER134 ASP135 SER136 VAL137 LEU138 SER139 ILE140 LYS141 GLN142 ALA143 VAL144 ASN145 LEU146 THR147 SER148 GLY149 LYS150 ASN151 LEU152 VAL153 GLY154 PHE155 TYR156 TYR157 PRO158 PRO159 ARG160 PHE161 VAL162 PHE163 ALA164 ASP165 THR166 ARG167 ILE168 LEU169 SER170 GLU171 SER172 PRO173 PRO174 ARG175 GLN176 VAL177 LYS178 ALA179 GLY180 MET181 CYS182 GLU183 LEU184 VAL185 LYS186 ASN187 MET188 LEU189 ILE190 LEU191 GLU192 ASN193 ASP194 ASN195 LYS196 GLU197 PHE198 THR199 GLU200 ASP201 ASP202 LEU203 ASN204 SER205 ALA206 ASN207 VAL208 TYR209 SER210 PRO211 LYS212 GLN213 LEU214 GLU215 THR216 PHE217 ILE218 ASN219 PHE220 CYS221 ILE222 SER223 ALA224 LYS225 MET226 SER227 VAL228 LEU229 SER230 GLU231 ASP232 ILE233 TYR234 GLU235 LYS236 LYS237 LYS238 GLY239 LEU240 ILE241 PHE242 GLU243 TYR244 GLY245 HIS246 THR247 ILE248 GLY249 HIS250 ALA251 ILE252 GLU253 LEU254 ALA255 GLU256 GLN257 GLY258 GLY259 ILE260 THR261 HIS262 GLY263 GLU264 ALA265 ILE266 ALA267 VAL268 GLY269 MET270 ILE271 TYR272 ALA273 ALA274 LYS275 ILE276 ALA277 ASN278 ARG279 MET280 ASN281 LEU282 MET283 PRO284 GLU285 HIS286 ASP287 VAL288 SER289 ALA290 HIS291 TYR292 TRP293 LEU294 LEU295 ASN296 LYS297 ILE298 GLY299 ALA300 LEU301 GLN302 ASP303 ILE304 PRO305 LEU306 LYS307 SER308 ASP309 PRO310 ASP311 SER312 ILE313 PHE314 HIS315 TYR316 LEU317 ILE318 HIS319 ASP320 ASN321 LYS322 ARG323 GLY324 TYR325 ILE326 LYS327 LEU328 ASP329 GLU330 ASP331 ASN332 LEU333 GLY334 MET335 ILE336 LEU337 LEU338 SER339 GLY340 VAL341 GLY342 LYS343 PRO344 ALA345 MET346 TYR347 ASN348 GLN349 THR350 LEU351 LEU352 THR353 PRO354 VAL355 ARG356 LYS357 THR358 LEU359 ILE360 LYS361 GLU362 VAL363 ILE364 ARG365 GLU366 GLY367 LEU368
Unit 2 THR2 THR3 LYS4 GLN5 ILE6 CYS7 PHE8 ALA9 ASP10 ARG11 CYS12 PHE13 ASN14 PHE15 ALA16 PHE17 GLY18 GLU19 HIS20 VAL21 LEU22 GLU23 SER24 VAL25 GLU26 SER27 TYR28 ILE29 PRO30 ARG31 ASP32 GLU33 PHE34 ASP35 GLN36 TYR37 ILE38 MET39 ILE40 SER41 ASP42 SER43 GLY44 VAL45 PRO46 ASP47 SER48 ILE49 VAL50 HIS51 TYR52 ALA53 ALA54 GLU55 TYR56 PHE57 GLY58 LYS59 LEU60 ALA61 PRO62 VAL63 HIS64 ILE65 LEU66 ARG67 PHE68 GLN69 GLY70 GLY71 GLU72 GLU73 TYR74 LYS75 THR76 LEU77 SER78 THR79 VAL80 THR81 ASN82 LEU83 GLN84 GLU85 ARG86 ALA87 ILE88 ALA89 LEU90 GLY91 ALA92 ASN93 ARG94 ARG95 THR96 ALA97 ILE98 VAL99 ALA100 VAL101 GLY102 GLY103 GLY104 LEU105 THR106 GLY107 ASN108 VAL109 ALA110 GLY111 VAL112 ALA113 ALA114 GLY115 MET116 MET117 PHE118 ARG119 GLY120 ILE121 ALA122 LEU123 ILE124 HIS125 VAL126 PRO127 THR128 THR129 PHE130 LEU131 ALA132 ALA133 SER134 ASP135 SER136 VAL137 LEU138 SER139 ILE140 LYS141 GLN142 ALA143 VAL144 ASN145 LEU146 THR147 SER148 GLY149 LYS150 ASN151 LEU152 VAL153 GLY154 PHE155 TYR156 TYR157 PRO158 PRO159 ARG160 PHE161 VAL162 PHE163 ALA164 ASP165 THR166 ARG167 ILE168 LEU169 SER170 GLU171 SER172 PRO173 PRO174 ARG175 GLN176 VAL177 LYS178 ALA179 GLY180 MET181 CYS182 GLU183 LEU184 VAL185 LYS186 ASN187 MET188 LEU189 ILE190 LEU191 GLU192 ASN193 ASP194 ASN195 LYS196 GLU197 PHE198 THR199 GLU200 ASP201 ASP202 LEU203 ASN204 SER205 ALA206 ASN207 VAL208 TYR209 SER210 PRO211 LYS212 GLN213 LEU214 GLU215 THR216 PHE217 ILE218 ASN219 PHE220 CYS221 ILE222 SER223 ALA224 LYS225 MET226 SER227 VAL228 LEU229 SER230 GLU231 ASP232 ILE233 TYR234 GLU235 LYS236 LYS237 LYS238 GLY239 LEU240 ILE241 PHE242 GLU243 TYR244 GLY245 HIS246 THR247 ILE248 GLY249 HIS250 ALA251 ILE252 GLU253 LEU254 ALA255 GLU256 GLN257 GLY258 GLY259 ILE260 THR261 HIS262 GLY263 GLU264 ALA265 ILE266 ALA267 VAL268 GLY269 MET270 ILE271 TYR272 ALA273 ALA274 LYS275 ILE276 ALA277 ASN278 ARG279 MET280 ASN281 LEU282 MET283 PRO284 GLU285 HIS286 ASP287 VAL288 SER289 ALA290 HIS291 TYR292 TRP293 LEU294 LEU295 ASN296 LYS297 ILE298 GLY299 ALA300 LEU301 GLN302 ASP303 ILE304 PRO305 LEU306 LYS307 SER308 ASP309 PRO310 ASP311 SER312 ILE313 PHE314 HIS315 TYR316 LEU317 ILE318 HIS319 ASP320 ASN321 ASP329 GLU330 ASP331 ASN332 LEU333 GLY334 MET335 ILE336 LEU337 LEU338 SER339 GLY340 VAL341 GLY342 LYS343 PRO344 ALA345 MET346 TYR347 ASN348 GLN349 THR350 LEU351 LEU352 THR353 PRO354 VAL355 ARG356 LYS357 THR358 LEU359 ILE360 LYS361 GLU362 VAL363 ILE364 ARG365 GLU366 GLY367 LEU368
Ligands
Unit 3 CO601 NAD603 SO3605 EXO607 PO4608 MPD611
Unit 4 CO602 NAD604 SO3606 CAK609 MPD610
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany