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Title | CRYSTAL STRUCTURE OF AN RNA QUADRUPLEX CONTAINING INOSINE- TETRAD | |
Keywords | RNA QUADRUPLEX | |
Experiment | X-ray diffraction | |
Number of Models | 1 |
Database | ID code | Status | Coordinate files | ||
Header | Asymmetric unit | Biological unit | |||
PDB | 2GRB | released | available | available | Quaternary Structure Server |
Unit | Type | Name | Chain ID | Residues | Atoms | Hetatoms |
---|---|---|---|---|---|---|
1 | RNA | A | 5 | 108 | 0 | |
2 | RNA | B | 5 | 111 | 0 | |
3 | RNA | C | 6 | 111 | 17 | |
4 | RNA | D | 6 | 111 | 17 | |
5 | RNA | E | 6 | 111 | 17 | |
6 | RNA | F | 6 | 111 | 17 | |
7 | RNA | G | 6 | 111 | 17 | |
8 | RNA | H | 5 | 111 | 0 | |
9 | Ligand | 5'-R(*(U33)P*GP*IP*GP*GP*U)-3' | A | 4 | 0 | 4 |
10 | Ligand | 5'-R(*(U33)P*GP*IP*GP*GP*U)-3' | B | 1 | 0 | 1 |
11 | Ligand | 5'-R(*(U33)P*GP*IP*GP*GP*U)-3' | D | 1 | 0 | 1 |
12 | Ligand | 5'-R(*(U33)P*GP*IP*GP*GP*U)-3' | E | 4 | 0 | 4 |
13 | Ligand | 5'-R(*(U33)P*GP*IP*GP*GP*U)-3' | F | 1 | 0 | 1 |
14 | Ligand | 5'-R(*(U33)P*GP*IP*GP*GP*U)-3' | H | 1 | 0 | 1 |
15 | Water | 178 | 0 | 178 | ||
total | 235 | 885 | 275 |
Unit 1 | G2 I3 G4 G5 U6 |
Unit 2 | G2 I3 G4 G5 U6 |
Unit 3 | U331 G2 I3 G4 G5 U6 |
Unit 4 | U331 G2 I3 G4 G5 U6 |
Unit 5 | U331 G2 I3 G4 G5 U6 |
Unit 6 | U331 G2 I3 G4 G5 U6 |
Unit 7 | U331 G2 I3 G4 G5 U6 |
Unit 8 | G2 I3 G4 G5 U6 |
Unit 9 | K301 K302 K303 K304 |
Unit 10 | SR401 |
Unit 11 | K312 |
Unit 12 | K305 K306 K307 K308 |
Unit 13 | K313 |
Unit 14 | K309 |
Check the naming of phosphate and ribose substituents. Recommended for phosphate oxygens and for ribose hydrogens in NMR structures.
Perl script: | PDBscan.pl (15 Sep 2016) |
Author: | Peter Slickers (slickers@leibniz-fli.de), IMB Jena, Germany |