Jena Library of Biological Macromolecules - Home Page [Image Library Home] [Image Library Entry]

Sequence, Chains, Asymmetric and Biological Units

Title 2'-ME-SE AND BR DERIVITATION OF A-DNA OCTAMER G(UMS)G(BRU) ACAC
Keywords 2'-METHYLSELENO-URIDINE, SE-DNA, SE-BR-DNA, SELENIUM DERIVATIZATION
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   2GPX     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  DNA    A 8 121 41
2  Ligand   5'-D(*GP*(UMS)P*GP*(BRU)P*AP*CP*AP*C)-3'  A 1 0 1
3 Water     31 0 31
total       40 121 73

Nucleic acids
Unit 1 DG1 UMS2 DG3 BRU4 DA5 DC6 DA7 DC8

Ligands
Unit 2 BA101

Chirality of ribose and phosphate atoms

Check the naming of phosphate and ribose substituents. Recommended for phosphate oxygens and for ribose hydrogens in NMR structures.


Go to    [Image Library Home]    [Image Library Entry]
Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany