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Sequence, Chains, Asymmetric and Biological Units

Title STRUCTURE OF [FES]CLUSTER-FREE APO FORM OF 6-PHOSPHOGLUCONAT DEHYDRATASE FROM SHEWANELLA ONEIDENSIS
Keywords N-TERMINAL DOMAIN LARGELY ALPHA-HELICAL, C-TERMINAL DOMAIN M BETA-SHEET (TREFOIL-LIKE), STRUCTURAL GENOMICS, PSI, PROTEI STRUCTURE INITIATIVE, SOUTHEAST COLLABORATORY FOR STRUCTURA GENOMICS, SECSG, LYASE
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   2GP4     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   6-PHOSPHOGLUCONATE DEHYDRATASE  A 523 3780 112
2  Protein   6-PHOSPHOGLUCONATE DEHYDRATASE  B 495 3559 112
3 Water     553 0 553
total       1571 7339 777
Proteins
Unit 1 HIS0 MSE1 HIS2 SER3 VAL4 VAL5 GLN6 SER7 VAL8 THR9 ASP10 ARG11 ILE12 ILE13 ALA14 ARG15 SER16 LYS17 ALA18 SER19 ARG20 GLU21 ALA22 TYR23 LEU24 ALA25 ALA26 LEU27 ASN28 ASP29 ALA30 ARG31 ASN32 HIS33 LEU90 LEU91 LYS92 GLN96 GLU97 VAL98 GLY99 SER100 VAL101 ALA102 GLN103 VAL104 ALA105 GLY107 VAL108 PRO109 CYS112 ASP113 GLY114 VAL115 THR116 GLN117 GLY118 GLN119 PRO120 GLY121 MSE122 GLU123 LEU124 SER125 LEU126 LEU127 SER128 ARG129 GLU130 VAL131 ILE132 ALA133 MSE134 ALA135 THR136 ALA137 VAL138 GLY139 LEU140 SER141 HIS142 ASN143 MSE144 PHE145 ASP146 GLY147 ALA148 LEU149 LEU150 LEU151 GLY152 ILE153 CYS154 ASP155 LYS156 ILE157 VAL158 PRO159 GLY160 LEU161 LEU162 ILE163 GLY164 ALA165 LEU166 SER167 PHE168 GLY169 HIS170 LEU171 PRO172 MSE173 LEU174 PHE175 VAL176 PRO177 ALA178 GLY179 PRO180 GLY200 LYS201 VAL202 ASP203 ARG204 ALA205 GLN206 LEU207 LEU208 GLU209 ALA210 GLU211 ALA212 GLN213 SER214 TYR215 HIS216 SER217 ALA218 GLY219 THR220 CYS221 THR222 PHE223 TYR224 GLY225 GLN231 LEU232 MSE233 LEU234 GLU235 VAL236 MSE237 GLY238 LEU239 GLN240 LEU241 PRO242 GLY243 SER244 SER245 PHE246 VAL247 ASN248 PRO249 ASP250 ASP251 PRO252 LEU253 ARG254 GLU255 ALA256 LEU257 ASN258 LYS259 MSE260 ALA261 ALA262 LYS263 GLN264 VAL265 CYS266 ARG267 LEU268 THR269 GLU270 LEU271 GLY272 THR273 GLN274 TYR275 SER276 PRO277 ILE278 GLY279 GLU280 VAL281 VAL282 ASN283 GLU284 LYS285 SER286 ILE287 VAL288 ASN289 GLY290 ILE291 VAL292 ALA293 LEU294 LEU295 ALA296 THR297 GLY298 GLY299 SER300 THR301 ASN302 LEU303 THR304 MSE305 HIS306 ILE307 VAL308 ALA309 ALA310 ALA311 ARG312 ALA313 ALA314 GLY315 ILE316 ILE317 VAL318 ASN319 TRP320 ASP321 ASP322 PHE323 SER324 GLU325 LEU326 SER327 ASP328 ALA329 VAL330 PRO331 LEU332 LEU333 ALA334 ARG335 VAL336 TYR337 PRO338 ASN339 GLY340 HIS341 ALA342 ASP343 ILE344 ASN345 HIS346 PHE347 HIS348 ALA349 ALA350 GLY351 GLY352 MSE353 ALA354 PHE355 LEU356 ILE357 LYS358 GLU359 LEU360 LEU361 ASP362 ALA363 GLY364 LEU365 LEU366 HIS367 GLU368 ASP369 VAL370 ASN371 THR372 VAL373 ALA374 GLY375 TYR376 GLY377 LEU378 ARG379 ARG380 TYR381 THR382 GLN383 GLU384 PRO385 LYS386 LEU387 LEU388 ASP389 GLY390 GLU391 LEU392 ARG393 TRP394 VAL395 ASP396 GLY397 PRO398 THR399 VAL400 SER401 LEU402 ASP403 THR404 GLU405 VAL406 LEU407 THR408 SER409 VAL410 ALA411 THR412 PRO413 PHE414 GLN415 ASN416 ASN417 GLY418 GLY419 LEU420 LYS421 LEU422 LEU423 LYS424 GLY425 ASN426 LEU427 GLY428 ARG429 ALA430 VAL431 ILE432 LYS433 VAL434 SER435 ALA436 VAL437 GLN438 PRO439 GLN440 HIS441 ARG442 VAL443 VAL444 GLU445 ALA446 PRO447 ALA448 VAL449 VAL450 ILE451 ASP452 ASP453 GLN454 ASN455 LYS456 LEU457 ASP458 ALA459 LEU460 PHE461 LYS462 SER463 GLY464 ALA465 LEU466 ASP467 ARG468 ASP469 CYS470 VAL471 VAL472 VAL473 VAL474 LYS475 GLY476 GLN477 GLY478 PRO479 LYS480 ALA481 ASN482 GLY483 MSE484 PRO485 GLU486 LEU487 HIS488 LYS489 LEU490 THR491 PRO492 LEU493 LEU494 GLY495 SER496 LEU497 GLN498 ASP499 LYS500 GLY501 PHE502 LYS503 VAL504 ALA505 LEU506 MSE507 THR508 ASP509 GLY510 ARG511 MSE512 SER513 GLY514 ALA515 SER516 GLY517 LYS518 VAL519 PRO520 ALA521 ALA522 ILE523 HIS524 LEU525 THR526 PRO527 GLU528 ALA529 ILE530 ASP531 GLY532 GLY533 LEU534 ILE535 ALA536 LYS537 VAL538 GLN539 ASP540 GLY541 ASP542 LEU543 ILE544 ARG545 VAL546 ASP547 ALA548 LEU549 THR550 GLY551 GLU552 LEU553 SER554 LEU555 LEU556 VAL557 SER558 ASP559 THR560 GLU561 LEU562 ALA563 THR564 ARG565 THR566 ALA567 THR568 GLU569 ILE570 ASP571 LEU572 ARG573 HIS574 SER575 ARG576 TYR577 GLY578 MSE579 GLY580 ARG581 GLU582 LEU583 PHE584 GLY585 VAL586 LEU587 ARG588 SER589 ASN590 LEU591 SER592 SER593 PRO594 GLU595 THR596 GLY597 ALA598 ARG599 SER600 THR601 SER602 ALA603 ILE604 ASP605 GLU606 LEU607 TYR608
Unit 2 HIS0 MSE1 HIS2 SER3 VAL4 VAL5 GLN6 SER7 VAL8 THR9 ASP10 ARG11 ILE12 ILE13 ALA14 ARG15 SER16 LYS17 ALA18 SER19 ARG20 GLU21 ALA22 TYR23 LEU24 ALA25 ALA26 LEU27 ASN28 ASP29 ALA30 ARG31 ASN32 HIS33 LYS93 ALA94 CYS95 GLN96 GLU97 VAL98 GLY99 SER100 VAL101 ALA102 GLN103 VAL104 ALA105 VAL108 PRO109 CYS112 ASP113 GLY114 VAL115 THR116 GLN117 GLY118 GLN119 PRO120 GLY121 MSE122 GLU123 LEU124 SER125 LEU126 LEU127 SER128 ARG129 GLU130 VAL131 ILE132 ALA133 MSE134 ALA135 THR136 ALA137 VAL138 GLY139 LEU140 SER141 HIS142 ASN143 MSE144 PHE145 ASP146 GLY147 ALA148 LEU149 LEU150 LEU151 GLY152 ILE153 CYS154 LYS156 ILE157 VAL158 PRO159 GLY160 LEU161 LEU162 ILE163 GLY164 ALA165 LEU166 SER167 PHE168 GLY169 HIS170 LEU171 PRO172 MSE173 LEU174 PHE175 VAL176 PRO177 ALA178 GLY179 PRO180 GLN231 LEU232 MSE233 LEU234 GLU235 VAL236 MSE237 GLY238 LEU239 GLN240 LEU241 PRO242 GLY243 SER244 SER245 PHE246 VAL247 ASN248 PRO249 ASP250 ASP251 PRO252 LEU253 ARG254 GLU255 ALA256 LEU257 ASN258 LYS259 MSE260 ALA261 ALA262 LYS263 GLN264 VAL265 CYS266 ARG267 LEU268 THR269 GLU270 LEU271 GLY272 THR273 GLN274 TYR275 SER276 PRO277 ILE278 GLY279 GLU280 VAL281 VAL282 ASN283 GLU284 LYS285 SER286 ILE287 VAL288 ASN289 GLY290 ILE291 VAL292 ALA293 LEU294 LEU295 ALA296 THR297 GLY298 GLY299 SER300 THR301 ASN302 LEU303 THR304 MSE305 HIS306 ILE307 VAL308 ALA309 ALA310 ALA311 ARG312 ALA313 ALA314 GLY315 ILE316 ILE317 VAL318 ASN319 TRP320 ASP321 ASP322 PHE323 SER324 GLU325 LEU326 SER327 ASP328 ALA329 VAL330 PRO331 LEU332 LEU333 ALA334 ARG335 VAL336 TYR337 PRO338 ASN339 GLY340 HIS341 ALA342 ASP343 ILE344 ASN345 HIS346 PHE347 HIS348 ALA349 ALA350 GLY351 GLY352 MSE353 ALA354 PHE355 LEU356 ILE357 LYS358 GLU359 LEU360 LEU361 ASP362 ALA363 GLY364 LEU365 LEU366 HIS367 GLU368 ASP369 VAL370 ASN371 THR372 VAL373 ALA374 GLY375 TYR376 GLY377 LEU378 ARG379 ARG380 TYR381 THR382 GLN383 GLU384 PRO385 LYS386 LEU387 LEU388 ASP389 GLY390 GLU391 LEU392 ARG393 TRP394 VAL395 ASP396 GLY397 PRO398 THR399 VAL400 SER401 LEU402 ASP403 THR404 GLU405 VAL406 LEU407 THR408 SER409 VAL410 ALA411 THR412 PRO413 PHE414 GLN415 ASN416 ASN417 GLY418 GLY419 LEU420 LYS421 LEU422 LEU423 LYS424 GLY425 ASN426 LEU427 GLY428 ARG429 ALA430 VAL431 ILE432 LYS433 VAL434 SER435 ALA436 VAL437 GLN438 PRO439 GLN440 HIS441 ARG442 VAL443 VAL444 GLU445 ALA446 PRO447 ALA448 VAL449 VAL450 ILE451 ASP452 ASP453 GLN454 ASN455 LYS456 LEU457 ASP458 ALA459 LEU460 PHE461 LYS462 SER463 GLY464 ALA465 LEU466 ASP467 ARG468 ASP469 CYS470 VAL471 VAL472 VAL473 VAL474 LYS475 GLY476 GLN477 GLY478 PRO479 LYS480 ALA481 ASN482 GLY483 MSE484 PRO485 GLU486 LEU487 HIS488 LYS489 LEU490 THR491 PRO492 LEU493 LEU494 GLY495 SER496 LEU497 GLN498 ASP499 LYS500 GLY501 PHE502 LYS503 VAL504 ALA505 LEU506 MSE507 THR508 ASP509 GLY510 ARG511 MSE512 SER513 GLY514 ALA515 SER516 GLY517 LYS518 VAL519 PRO520 ALA521 ALA522 ILE523 HIS524 LEU525 THR526 PRO527 GLU528 ALA529 ILE530 ASP531 GLY532 GLY533 LEU534 ILE535 ALA536 LYS537 VAL538 GLN539 ASP540 GLY541 ASP542 LEU543 ILE544 ARG545 VAL546 ASP547 ALA548 LEU549 THR550 GLY551 GLU552 LEU553 SER554 LEU555 LEU556 VAL557 SER558 ASP559 THR560 GLU561 LEU562 ALA563 THR564 ARG565 THR566 ALA567 THR568 GLU569 ILE570 ASP571 LEU572 ARG573 HIS574 SER575 ARG576 TYR577 GLY578 MSE579 GLY580 ARG581 GLU582 LEU583 PHE584 GLY585 VAL586 LEU587 ARG588 SER589 ASN590 LEU591 SER592 SER593 PRO594 GLU595 THR596 GLY597 ALA598 ARG599 SER600 THR601 SER602 ALA603 ILE604 ASP605 GLU606 LEU607 TYR608
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany