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Title | CRYSTAL STRUCTURE OF GLYCOSYLASPARAGINASE-SUBSTRATE COMPLEX | |
Keywords | GLYCOSYLASPARAGINASE, ENZYME-SUBSTRATE COMPLEX, CATALYTIC ME PROTON-RELAY NETWORK, ELECTRON-PAIR TRANSFER, NUCLEOPHILIC OXYANION HOLE, ENZYME-ACYL INTERMEDIATE, NTN-HYDROLASE, HYD | |
Experiment | X-ray diffraction | |
Number of Models | 1 |
Database | ID code | Status | Coordinate files | ||
Header | Asymmetric unit | Biological unit | |||
PDB | 2GL9 | released | available | available | Quaternary Structure Server |
Unit | Type | Name | Chain ID | Residues | Atoms | Hetatoms |
---|---|---|---|---|---|---|
1 | Protein | GLYCOSYLASPARAGINASE ALPHA CHAIN | A | 140 | 1090 | 0 |
2 | Protein | GLYCOSYLASPARAGINASE BETA CHAIN | B | 144 | 1075 | 0 |
3 | Protein | GLYCOSYLASPARAGINASE ALPHA CHAIN | C | 142 | 1106 | 0 |
4 | Protein | GLYCOSYLASPARAGINASE BETA CHAIN | D | 144 | 1075 | 0 |
5 | Ligand | GLYCOSYLASPARAGINASE ALPHA CHAIN | A | 1 | 0 | 14 |
6 | Protein | GLYCOSYLASPARAGINASE BETA CHAIN | B | 1 | 0 | 9 |
7 | Ligand | GLYCOSYLASPARAGINASE ALPHA CHAIN | C | 1 | 0 | 15 |
8 | Protein | GLYCOSYLASPARAGINASE BETA CHAIN | D | 1 | 0 | 9 |
9 | Water | 377 | 0 | 377 | ||
total | 951 | 4346 | 424 |
Unit 1 | THR2 ASN3 LYS4 PRO5 ILE6 VAL7 LEU8 SER9 THR10 TRP11 ASN12 PHE13 GLY14 LEU15 HIS16 ALA17 ASN18 VAL19 GLU20 ALA21 TRP22 LYS23 VAL24 LEU25 SER26 LYS27 GLY28 GLY29 LYS30 ALA31 LEU32 ASP33 ALA34 VAL35 GLU36 LYS37 GLY38 VAL39 ARG40 LEU41 VAL42 GLU43 ASP44 ASP45 PRO46 THR47 GLU48 ARG49 SER50 VAL51 GLY52 TYR53 GLY54 GLY55 ARG56 PRO57 ASP58 ARG59 ASP60 GLY61 ARG62 VAL63 THR64 LEU65 ASP66 ALA67 CYS68 ILE69 MET70 ASP71 GLU72 ASN73 TYR74 ASN75 ILE76 GLY77 SER78 VAL79 ALA80 CYS81 MET82 GLU83 HIS84 ILE85 LYS86 ASN87 PRO88 ILE89 SER90 VAL91 ALA92 ARG93 ALA94 VAL95 MET96 GLU97 LYS98 THR99 PRO100 HIS101 VAL102 MET103 LEU104 VAL105 GLY106 ASP107 GLY108 ALA109 LEU110 GLU111 PHE112 ALA113 LEU114 SER115 GLN116 GLY117 PHE118 LYS119 LYS120 GLU121 ASN122 LEU123 LEU124 THR125 ALA126 GLU127 SER128 GLU129 LYS130 GLU131 TRP132 LYS133 GLU134 TRP135 LEU136 LYS137 THR138 SER139 GLN140 TYR141 |
Unit 2 | CYS152 ILE153 GLY154 MET155 ILE156 ALA157 LEU158 ASP159 ALA160 GLN161 GLY162 ASN163 LEU164 SER165 GLY166 ALA167 CYS168 THR169 THR170 SER171 GLY172 MET173 ALA174 TYR175 LYS176 MET177 HIS178 GLY179 ARG180 VAL181 GLY182 ASP183 SER184 PRO185 ILE186 ILE187 GLY188 ALA189 GLY190 LEU191 PHE192 VAL193 ASP194 ASN195 GLU196 ILE197 GLY198 ALA199 ALA200 THR201 ALA202 THR203 GLY204 HIS205 GLY206 GLU207 GLU208 VAL209 ILE210 ARG211 THR212 VAL213 GLY214 THR215 HIS216 LEU217 VAL218 VAL219 GLU220 LEU221 MET222 ASN223 GLN224 GLY225 ARG226 THR227 PRO228 GLN229 GLN230 ALA231 CYS232 LYS233 GLU234 ALA235 VAL236 GLU237 ARG238 ILE239 VAL240 LYS241 ILE242 VAL243 ASN244 ARG245 ARG246 GLY247 LYS248 ASN249 LEU250 LYS251 ASP252 ILE253 GLN254 VAL255 GLY256 PHE257 ILE258 ALA259 LEU260 ASN261 LYS262 LYS263 GLY264 GLU265 TYR266 GLY267 ALA268 TYR269 CYS270 ILE271 GLN272 ASP273 GLY274 PHE275 ASN276 PHE277 ALA278 VAL279 HIS280 ASP281 GLN282 LYS283 GLY284 ASN285 ARG286 LEU287 GLU288 THR289 PRO290 GLY291 PHE292 ALA293 LEU294 LYS295 |
Unit 3 | THR302 ASN303 LYS304 PRO305 ILE306 VAL307 LEU308 SER309 THR310 TRP311 ASN312 PHE313 GLY314 LEU315 HIS316 ALA317 ASN318 VAL319 GLU320 ALA321 TRP322 LYS323 VAL324 LEU325 SER326 LYS327 GLY328 GLY329 LYS330 ALA331 LEU332 ASP333 ALA334 VAL335 GLU336 LYS337 GLY338 VAL339 ARG340 LEU341 VAL342 GLU343 ASP344 ASP345 PRO346 THR347 GLU348 ARG349 SER350 VAL351 GLY352 TYR353 GLY354 GLY355 ARG356 PRO357 ASP358 ARG359 ASP360 GLY361 ARG362 VAL363 THR364 LEU365 ASP366 ALA367 CYS368 ILE369 MET370 ASP371 GLU372 ASN373 TYR374 ASN375 ILE376 GLY377 SER378 VAL379 ALA380 CYS381 MET382 GLU383 HIS384 ILE385 LYS386 ASN387 PRO388 ILE389 SER390 VAL391 ALA392 ARG393 ALA394 VAL395 MET396 GLU397 LYS398 THR399 PRO400 HIS401 VAL402 MET403 LEU404 VAL405 GLY406 ASP407 GLY408 ALA409 LEU410 GLU411 PHE412 ALA413 LEU414 SER415 GLN416 GLY417 PHE418 LYS419 LYS420 GLU421 ASN422 LEU423 LEU424 THR425 ALA426 GLU427 SER428 GLU429 LYS430 GLU431 TRP432 LYS433 GLU434 TRP435 LEU436 LYS437 THR438 SER439 GLN440 TYR441 LYS442 PRO443 |
Unit 4 | CYS452 ILE453 GLY454 MET455 ILE456 ALA457 LEU458 ASP459 ALA460 GLN461 GLY462 ASN463 LEU464 SER465 GLY466 ALA467 CYS468 THR469 THR470 SER471 GLY472 MET473 ALA474 TYR475 LYS476 MET477 HIS478 GLY479 ARG480 VAL481 GLY482 ASP483 SER484 PRO485 ILE486 ILE487 GLY488 ALA489 GLY490 LEU491 PHE492 VAL493 ASP494 ASN495 GLU496 ILE497 GLY498 ALA499 ALA500 THR501 ALA502 THR503 GLY504 HIS505 GLY506 GLU507 GLU508 VAL509 ILE510 ARG511 THR512 VAL513 GLY514 THR515 HIS516 LEU517 VAL518 VAL519 GLU520 LEU521 MET522 ASN523 GLN524 GLY525 ARG526 THR527 PRO528 GLN529 GLN530 ALA531 CYS532 LYS533 GLU534 ALA535 VAL536 GLU537 ARG538 ILE539 VAL540 LYS541 ILE542 VAL543 ASN544 ARG545 ARG546 GLY547 LYS548 ASN549 LEU550 LYS551 ASP552 ILE553 GLN554 VAL555 GLY556 PHE557 ILE558 ALA559 LEU560 ASN561 LYS562 LYS563 GLY564 GLU565 TYR566 GLY567 ALA568 TYR569 CYS570 ILE571 GLN572 ASP573 GLY574 PHE575 ASN576 PHE577 ALA578 VAL579 HIS580 ASP581 GLN582 LYS583 GLY584 ASN585 ARG586 LEU587 GLU588 THR589 PRO590 GLY591 PHE592 ALA593 LEU594 LYS595 |
Unit 6 | ASN297 |
Unit 8 | ASN597 |
Unit 5 | NAG296 |
Unit 7 | NAG596 |
Perl script: | PDBscan.pl (15 Sep 2016) |
Author: | Peter Slickers (slickers@leibniz-fli.de), IMB Jena, Germany |