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Sequence, Chains, Asymmetric and Biological Units

Title STRUCTURE OF THE S-ADENOSYLMETHIONINE RIBOSWITCH MRNA REGULA ELEMENT
Keywords MRNA, RIBOSWITCH, S-ADENOSYLMETHIONINE, SAM, RNA-LIGAND COMP
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

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Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  RNA    A 94 2029 0
2  Ligand   SAM-I RIBOSWITCH  A 7 0 57
3 Water     88 0 88
total       189 2029 145

Nucleic acids
Unit 1 G1 G2 C3 U4 U5 A6 U7 C8 A9 A10 G11 A12 G13 A14 G15 G16 U17 G18 G19 A20 G21 G22 G23 A24 C25 U26 G27 G28 C29 C30 C31 G32 A33 U34 G35 A36 A37 A38 C39 C40 C41 G42 G43 C44 A45 A46 C47 C48 A49 G50 A51 A52 A53 U54 G55 G56 U57 G58 C59 C60 A61 A62 U63 U64 C65 C66 U67 G68 C69 A70 G71 C72 G73 G74 A75 A76 A77 C78 G79 U80 U81 G82 A83 A84 A85 G86 A87 U88 G89 A90 G91 C92 C93 A94

Ligands
Unit 2 IRI201 IRI202 IRI203 IRI204 MG205 MG206 SAM301

Chirality of ribose and phosphate atoms

Check the naming of phosphate and ribose substituents. Recommended for phosphate oxygens and for ribose hydrogens in NMR structures.


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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany