2GDV - Sequence, Chains, Asymmetric and Biological Units

• Title: SUCROSE PHOSPHORYLASE FROM BIFIDOBACTERIUM ADOLESCENTIS REAC SUCROSE
• Keywords: BETA-ALPHA-BARRELS, DIMER, GLYCOSIDE HYDROLASE, TRANSFERASE
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	2GDV	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	SUCROSE PHOSPHORYLASE	A	504	3965	0
2	Protein	SUCROSE PHOSPHORYLASE	B	504	3965	0
3	Ligand	SUCROSE PHOSPHORYLASE	A	1	0	11
4	Ligand	SUCROSE PHOSPHORYLASE	B	1	0	12
5	Water			1006	0	1006
total				2016	7930	1029

Proteins

Unit 1

MET 1 LYS 2 ASN 3 LYS 4 VAL 5 GLN 6 LEU 7 ILE 8 THR 9 TYR 10 ALA 11 ASP 12 ARG 13 LEU 14 GLY 15 ASP 16 GLY 17 THR 18 ILE 19 LYS 20 SER 21 MET 22 THR 23 ASP 24 ILE 25 LEU 26 ARG 27 THR 28 ARG 29 PHE 30 ASP 31 GLY 32 VAL 33 TYR 34 ASP 35 GLY 36 VAL 37 HIS 38 ILE 39 LEU 40 PRO 41 PHE 42 PHE 43 THR 44 PRO 45 PHE 46 ASP 47 GLY 48 ALA 49 ASP 50 ALA 51 GLY 52 PHE 53 ASP 54 PRO 55 ILE 56 ASP 57 HIS 58 THR 59 LYS 60 VAL 61 ASP 62 GLU 63 ARG 64 LEU 65 GLY 66 SER 67 TRP 68 ASP 69 ASP 70 VAL 71 ALA 72 GLU 73 LEU 74 SER 75 LYS 76 THR 77 HIS 78 ASN 79 ILE 80 MET 81 VAL 82 ASP 83 ALA 84 ILE 85 VAL 86 ASN 87 HIS 88 MET 89 SER 90 TRP 91 GLU 92 SER 93 LYS 94 GLN 95 PHE 96 GLN 97 ASP 98 VAL 99 LEU 100 ALA 101 LYS 102 GLY 103 GLU 104 GLU 105 SER 106 GLU 107 TYR 108 TYR 109 PRO 110 MET 111 PHE 112 LEU 113 THR 114 MET 115 SER 116 SER 117 VAL 118 PHE 119 PRO 120 ASN 121 GLY 122 ALA 123 THR 124 GLU 125 GLU 126 ASP 127 LEU 128 ALA 129 GLY 130 ILE 131 TYR 132 ARG 133 PRO 134 ARG 135 PRO 136 GLY 137 LEU 138 PRO 139 PHE 140 THR 141 HIS 142 TYR 143 LYS 144 PHE 145 ALA 146 GLY 147 LYS 148 THR 149 ARG 150 LEU 151 VAL 152 TRP 153 VAL 154 SER 155 PHE 156 THR 157 PRO 158 GLN 159 GLN 160 VAL 161 ASP 162 ILE 163 ASP 164 THR 165 ASP 166 SER 167 ASP 168 LYS 169 GLY 170 TRP 171 GLU 172 TYR 173 LEU 174 MET 175 SER 176 ILE 177 PHE 178 ASP 179 GLN 180 MET 181 ALA 182 ALA 183 SER 184 HIS 185 VAL 186 SER 187 TYR 188 ILE 189 ARG 190 LEU 191 ASP 192 ALA 193 VAL 194 GLY 195 TYR 196 GLY 197 ALA 198 LYS 199 GLU 200 ALA 201 GLY 202 THR 203 SER 204 CYS 205 PHE 206 MET 207 THR 208 PRO 209 LYS 210 THR 211 PHE 212 LYS 213 LEU 214 ILE 215 SER 216 ARG 217 LEU 218 ARG 219 GLU 220 GLU 221 GLY 222 VAL 223 LYS 224 ARG 225 GLY 226 LEU 227 GLU 228 ILE 229 LEU 230 ILE 231 GLU 232 VAL 233 HIS 234 SER 235 TYR 236 TYR 237 LYS 238 LYS 239 GLN 240 VAL 241 GLU 242 ILE 243 ALA 244 SER 245 LYS 246 VAL 247 ASP 248 ARG 249 VAL 250 TYR 251 ASP 252 PHE 253 ALA 254 LEU 255 PRO 256 PRO 257 LEU 258 LEU 259 LEU 260 HIS 261 ALA 262 LEU 263 SER 264 THR 265 GLY 266 HIS 267 VAL 268 GLU 269 PRO 270 VAL 271 ALA 272 HIS 273 TRP 274 THR 275 ASP 276 ILE 277 ARG 278 PRO 279 ASN 280 ASN 281 ALA 282 VAL 283 THR 284 VAL 285 LEU 286 ASP 287 THR 288 HIS 289 ASP 290 GLY 291 ILE 292 GLY 293 VAL 294 ILE 295 ASP 296 ILE 297 GLY 298 SER 299 ASP 300 GLN 301 LEU 302 ASP 303 ARG 304 SER 305 LEU 306 LYS 307 GLY 308 LEU 309 VAL 310 PRO 311 ASP 312 GLU 313 ASP 314 VAL 315 ASP 316 ASN 317 LEU 318 VAL 319 ASN 320 THR 321 ILE 322 HIS 323 ALA 324 ASN 325 THR 326 HIS 327 GLY 328 GLU 329 SER 330 GLN 331 ALA 332 ALA 333 THR 334 GLY 335 ALA 336 ALA 337 ALA 338 SER 339 ASN 340 LEU 341 ASP 342 LEU 343 TYR 344 GLN 345 VAL 346 ASN 347 SER 348 THR 349 TYR 350 TYR 351 SER 352 ALA 353 LEU 354 GLY 355 CYS 356 ASN 357 ASP 358 GLN 359 HIS 360 TYR 361 ILE 362 ALA 363 ALA 364 ARG 365 ALA 366 VAL 367 GLN 368 PHE 369 PHE 370 LEU 371 PRO 372 GLY 373 VAL 374 PRO 375 GLN 376 VAL 377 TYR 378 TYR 379 VAL 380 GLY 381 ALA 382 LEU 383 ALA 384 GLY 385 LYS 386 ASN 387 ASP 388 MET 389 GLU 390 LEU 391 LEU 392 ARG 393 LYS 394 THR 395 ASN 396 ASN 397 GLY 398 ARG 399 ASP 400 ILE 401 ASN 402 ARG 403 HIS 404 TYR 405 TYR 406 SER 407 THR 408 ALA 409 GLU 410 ILE 411 ASP 412 GLU 413 ASN 414 LEU 415 LYS 416 ARG 417 PRO 418 VAL 419 VAL 420 LYS 421 ALA 422 LEU 423 ASN 424 ALA 425 LEU 426 ALA 427 LYS 428 PHE 429 ARG 430 ASN 431 GLU 432 LEU 433 ASP 434 ALA 435 PHE 436 ASP 437 GLY 438 THR 439 PHE 440 SER 441 TYR 442 THR 443 THR 444 ASP 445 ASP 446 ASP 447 THR 448 SER 449 ILE 450 SER 451 PHE 452 THR 453 TRP 454 ARG 455 GLY 456 GLU 457 THR 458 SER 459 GLN 460 ALA 461 THR 462 LEU 463 THR 464 PHE 465 GLU 466 PRO 467 LYS 468 ARG 469 GLY 470 LEU 471 GLY 472 VAL 473 ASP 474 ASN 475 THR 476 THR 477 PRO 478 VAL 479 ALA 480 MET 481 LEU 482 GLU 483 TRP 484 GLU 485 ASP 486 SER 487 ALA 488 GLY 489 ASP 490 HIS 491 ARG 492 SER 493 ASP 494 ASP 495 LEU 496 ILE 497 ALA 498 ASN 499 PRO 500 PRO 501 VAL 502 VAL 503 ALA 504

Unit 2

MET 1 LYS 2 ASN 3 LYS 4 VAL 5 GLN 6 LEU 7 ILE 8 THR 9 TYR 10 ALA 11 ASP 12 ARG 13 LEU 14 GLY 15 ASP 16 GLY 17 THR 18 ILE 19 LYS 20 SER 21 MET 22 THR 23 ASP 24 ILE 25 LEU 26 ARG 27 THR 28 ARG 29 PHE 30 ASP 31 GLY 32 VAL 33 TYR 34 ASP 35 GLY 36 VAL 37 HIS 38 ILE 39 LEU 40 PRO 41 PHE 42 PHE 43 THR 44 PRO 45 PHE 46 ASP 47 GLY 48 ALA 49 ASP 50 ALA 51 GLY 52 PHE 53 ASP 54 PRO 55 ILE 56 ASP 57 HIS 58 THR 59 LYS 60 VAL 61 ASP 62 GLU 63 ARG 64 LEU 65 GLY 66 SER 67 TRP 68 ASP 69 ASP 70 VAL 71 ALA 72 GLU 73 LEU 74 SER 75 LYS 76 THR 77 HIS 78 ASN 79 ILE 80 MET 81 VAL 82 ASP 83 ALA 84 ILE 85 VAL 86 ASN 87 HIS 88 MET 89 SER 90 TRP 91 GLU 92 SER 93 LYS 94 GLN 95 PHE 96 GLN 97 ASP 98 VAL 99 LEU 100 ALA 101 LYS 102 GLY 103 GLU 104 GLU 105 SER 106 GLU 107 TYR 108 TYR 109 PRO 110 MET 111 PHE 112 LEU 113 THR 114 MET 115 SER 116 SER 117 VAL 118 PHE 119 PRO 120 ASN 121 GLY 122 ALA 123 THR 124 GLU 125 GLU 126 ASP 127 LEU 128 ALA 129 GLY 130 ILE 131 TYR 132 ARG 133 PRO 134 ARG 135 PRO 136 GLY 137 LEU 138 PRO 139 PHE 140 THR 141 HIS 142 TYR 143 LYS 144 PHE 145 ALA 146 GLY 147 LYS 148 THR 149 ARG 150 LEU 151 VAL 152 TRP 153 VAL 154 SER 155 PHE 156 THR 157 PRO 158 GLN 159 GLN 160 VAL 161 ASP 162 ILE 163 ASP 164 THR 165 ASP 166 SER 167 ASP 168 LYS 169 GLY 170 TRP 171 GLU 172 TYR 173 LEU 174 MET 175 SER 176 ILE 177 PHE 178 ASP 179 GLN 180 MET 181 ALA 182 ALA 183 SER 184 HIS 185 VAL 186 SER 187 TYR 188 ILE 189 ARG 190 LEU 191 ASP 192 ALA 193 VAL 194 GLY 195 TYR 196 GLY 197 ALA 198 LYS 199 GLU 200 ALA 201 GLY 202 THR 203 SER 204 CYS 205 PHE 206 MET 207 THR 208 PRO 209 LYS 210 THR 211 PHE 212 LYS 213 LEU 214 ILE 215 SER 216 ARG 217 LEU 218 ARG 219 GLU 220 GLU 221 GLY 222 VAL 223 LYS 224 ARG 225 GLY 226 LEU 227 GLU 228 ILE 229 LEU 230 ILE 231 GLU 232 VAL 233 HIS 234 SER 235 TYR 236 TYR 237 LYS 238 LYS 239 GLN 240 VAL 241 GLU 242 ILE 243 ALA 244 SER 245 LYS 246 VAL 247 ASP 248 ARG 249 VAL 250 TYR 251 ASP 252 PHE 253 ALA 254 LEU 255 PRO 256 PRO 257 LEU 258 LEU 259 LEU 260 HIS 261 ALA 262 LEU 263 SER 264 THR 265 GLY 266 HIS 267 VAL 268 GLU 269 PRO 270 VAL 271 ALA 272 HIS 273 TRP 274 THR 275 ASP 276 ILE 277 ARG 278 PRO 279 ASN 280 ASN 281 ALA 282 VAL 283 THR 284 VAL 285 LEU 286 ASP 287 THR 288 HIS 289 ASP 290 GLY 291 ILE 292 GLY 293 VAL 294 ILE 295 ASP 296 ILE 297 GLY 298 SER 299 ASP 300 GLN 301 LEU 302 ASP 303 ARG 304 SER 305 LEU 306 LYS 307 GLY 308 LEU 309 VAL 310 PRO 311 ASP 312 GLU 313 ASP 314 VAL 315 ASP 316 ASN 317 LEU 318 VAL 319 ASN 320 THR 321 ILE 322 HIS 323 ALA 324 ASN 325 THR 326 HIS 327 GLY 328 GLU 329 SER 330 GLN 331 ALA 332 ALA 333 THR 334 GLY 335 ALA 336 ALA 337 ALA 338 SER 339 ASN 340 LEU 341 ASP 342 LEU 343 TYR 344 GLN 345 VAL 346 ASN 347 SER 348 THR 349 TYR 350 TYR 351 SER 352 ALA 353 LEU 354 GLY 355 CYS 356 ASN 357 ASP 358 GLN 359 HIS 360 TYR 361 ILE 362 ALA 363 ALA 364 ARG 365 ALA 366 VAL 367 GLN 368 PHE 369 PHE 370 LEU 371 PRO 372 GLY 373 VAL 374 PRO 375 GLN 376 VAL 377 TYR 378 TYR 379 VAL 380 GLY 381 ALA 382 LEU 383 ALA 384 GLY 385 LYS 386 ASN 387 ASP 388 MET 389 GLU 390 LEU 391 LEU 392 ARG 393 LYS 394 THR 395 ASN 396 ASN 397 GLY 398 ARG 399 ASP 400 ILE 401 ASN 402 ARG 403 HIS 404 TYR 405 TYR 406 SER 407 THR 408 ALA 409 GLU 410 ILE 411 ASP 412 GLU 413 ASN 414 LEU 415 LYS 416 ARG 417 PRO 418 VAL 419 VAL 420 LYS 421 ALA 422 LEU 423 ASN 424 ALA 425 LEU 426 ALA 427 LYS 428 PHE 429 ARG 430 ASN 431 GLU 432 LEU 433 ASP 434 ALA 435 PHE 436 ASP 437 GLY 438 THR 439 PHE 440 SER 441 TYR 442 THR 443 THR 444 ASP 445 ASP 446 ASP 447 THR 448 SER 449 ILE 450 SER 451 PHE 452 THR 453 TRP 454 ARG 455 GLY 456 GLU 457 THR 458 SER 459 GLN 460 ALA 461 THR 462 LEU 463 THR 464 PHE 465 GLU 466 PRO 467 LYS 468 ARG 469 GLY 470 LEU 471 GLY 472 VAL 473 ASP 474 ASN 475 THR 476 THR 477 PRO 478 VAL 479 ALA 480 MET 481 LEU 482 GLU 483 TRP 484 GLU 485 ASP 486 SER 487 ALA 488 GLY 489 ASP 490 HIS 491 ARG 492 SER 493 ASP 494 ASP 495 LEU 496 ILE 497 ALA 498 ASN 499 PRO 500 PRO 501 VAL 502 VAL 503 ALA 504

Ligands

Unit 3	BGC 700
Unit 4	BGC 701